Kryptolebias marmoratus (mangrove rivulus): 108237631
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Entry
108237631 CDS
T05608
Symbol
itga5
Name
(RefSeq) integrin alpha-5
KO
K06484
integrin alpha 5
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03266
Virion - Herpesvirus
kmr04145
Phagosome
kmr04510
Focal adhesion
kmr04512
ECM-receptor interaction
kmr04810
Regulation of actin cytoskeleton
kmr04820
Cytoskeleton in muscle cells
kmr05100
Bacterial invasion of epithelial cells
kmr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
108237631 (itga5)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108237631 (itga5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108237631 (itga5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
108237631 (itga5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
108237631 (itga5)
04810 Regulation of actin cytoskeleton
108237631 (itga5)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108237631 (itga5)
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
108237631 (itga5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
kmr04147
]
108237631 (itga5)
04515 Cell adhesion molecules [BR:
kmr04515
]
108237631 (itga5)
04090 CD molecules [BR:
kmr04090
]
108237631 (itga5)
Exosome [BR:
kmr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108237631 (itga5)
Cell adhesion molecules [BR:
kmr04515
]
Integrins
Integrin alpha subunits
108237631 (itga5)
CD molecules [BR:
kmr04090
]
Proteins
108237631 (itga5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
DUF11
ITGAX-like_Ig_3
Motif
Other DBs
NCBI-GeneID:
108237631
NCBI-ProteinID:
XP_017274677
UniProt:
A0A3Q2ZT47
LinkDB
All DBs
Position
LG8:complement(7906145..7946184)
Genome browser
AA seq
1060 aa
AA seq
DB search
MALGRLRTKTPGTGACLARSSLCLFGLLVTFSHPSCDAFNLDAESPAIYNGPEGSYFGYA
VDFYLSESASASVVIGAPKANTRQINITEGGSVFYCPWSLGQSNCHTIEFDLEGDRPSMT
NSTIPQVDFKSHQWFGATVRSHGDTILACAPLYSWRTEKDIPRSDATGTCYLSVQNFTKF
VEYAPCRTELSDAEGQGYCQGGFSADFTKDGKVVLGGPGSYFWQGQVISANKEDIIKAYY
PGYFMQSVEGQIQTKQVQAAHDDSYQGYSIAVGEFTGDQVEDFVAGIPKGPTLNGSVSIL
DGTNLTAMMSYTGEQIGSYFGYALATTDINSDGMIDLLVGAPMLMVRGSDNRLEEMGRVY
VYLQRGPLNLELSVPHPHLTGTQVFGRFGSTIAPLGDLNQDGFDDVAISAPFGGEDQQGL
VYIYNGYSEGLKEKPSQVIAGQWAAGALPASFGFALRGAKDLDKNGYPDLIVGAFGVNKA
VLYRSRPIVNTTASLTVYPTMINPEEKNCMINSGNGSIPVSCVNLSFCIFADGKHLPANL
DFQVEVQLDSHKHKQKGAVKRALFSDSLEPLLQRSITVRHGERLCEHKKIYLRDEKDFRD
KLSPIFVAFNFSLDPKAAADSHGLRPILNYQTTNIIVQKAQILLDCGEDNICVPDLKLAV
YSDRKEVYFGDDNSVTLTFNARNEGEGGAYEAELYVVLPPESDYSGIARNESLTQLTCSY
ETENQTRYLSCDLGNPMKAGTNLWAGLRFTVPRLKDTQKTVQFDVQIRSKNENNSHSEVV
SHKLEVVVQADVILQGVSRPDKVFFPPANWKVPKTYAVEQDVGPAVEHIYELVNNGPSQI
SNTLLELRCPLRVQGHTLLYPLEFSTEGSINCTADKYMNHLNLRLQRTSTESPVLALKAH
EHHVERRDVHKNQLVNLTNLSCSNMDCWTLQCNVGLLEKGTTAILKMRSRIWAETFTEKA
YKHNVLECLARYSVKKMPYAILPKHFPTGHKKVVTPVVWNKPDIENSVPLWIIILAILAG
LLLLALLIYVLYRFGFFKRSVPYGTAMEKAQLKPQAASEA
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atggctttaggacgattacgcacaaagactccggggacgggcgcctgtctcgcccgctcg
tccctctgtctcttcggcctcttggtcactttctcgcatccgtcctgcgacgcgttcaac
ctggacgcggagagccccgcaatttacaacggacccgaggggagctacttcggatatgct
gttgacttttatttgtctgaatctgccagtgcaagcgtggtcattggagccccaaaggcc
aacacaaggcagatcaatattacagagggagggtctgtcttctactgtccatggagcctc
ggacaatcaaactgtcacaccattgagtttgatctagaaggagatcgcccttccatgacc
aacagcacaattccccaggttgacttcaagtcccatcagtggtttggtgccactgtgcgt
tctcatggtgacacgattctggcttgtgccccactttactcctggagaactgaaaaggat
atcccccgttctgatgctacaggaacctgctacctctcagtacagaatttcaccaaattt
gtggagtatgctccctgtcggacagaactcagtgatgcggaaggacaaggttactgtcag
gggggattcagtgctgactttacaaaggatggcaaagtggtgctgggtgggccaggcagc
tacttctggcaaggtcaagtgatctcagcaaataaggaagacattatcaaggcttactat
ccaggttattttatgcagtcagtggagggtcaaatccagaccaaacaggtccaggctgca
cacgatgatagctaccaaggctactctattgccgttggtgaattcactggtgatcaggtg
gaagattttgtagctggtattccaaaaggacccacacttaatggttcggtgtctatttta
gatggtacaaatctgacggccatgatgagttacaccggtgagcagatagggtcatatttc
ggctatgcattggcgacaactgacatcaacagtgatgggatgattgatctgctggtggga
gcgccgatgctaatggttcgaggttccgacaatcgtctggaggagatgggccgggtctat
gtttatctacagcgtggccctttaaacctggagctgagtgtacctcaccctcacctgaca
ggcacccaggtgtttgggagatttggcagcaccattgcaccactgggagacctaaaccag
gatggtttcgatgacgtggctataagcgccccatttggaggagaggaccaacaaggactg
gtctacatctataacggatactctgaaggtctgaaggagaagccgtctcaggtgattgcg
ggccaatgggctgctggggctcttcctgccagcttcgggtttgccctcagaggtgctaag
gacctggacaagaatggatacccagatctgattgtcggagcgtttggggttaataaggca
gttctttacagatcccgtcccatagtcaacaccaccgcctctctgacagtttatcccacc
atgatcaaccctgaagagaagaactgtatgataaacagtgggaacggcagcattcctgtc
tcctgtgtcaacctaagtttctgcatatttgctgatgggaaacacctaccggccaatcta
gatttccaggtggaggtgcagcttgacagtcacaagcacaagcagaaaggtgcagtgaag
agggctctgttctcagattcgcttgagcctttgctgcagagaagtattacagtgcgccac
ggggaacgtctgtgcgagcacaaaaagatttacttgagagatgagaaggacttcagggat
aaactctcccctatttttgtggccttcaacttcagcttggatccaaaggctgctgctgac
tcccatggcctacggcccatcctcaactatcagaccaccaacattattgtgcaaaaggct
cagattctgctggactgtggagaggacaacatctgcgttcctgacttgaagctcgcagtt
tatagcgacaggaaggaagtttacttcggtgatgacaactcagtgaccttgactttcaat
gccaggaatgaaggagagggaggagcgtatgaggcagagctgtatgtagtcctgccccct
gaatctgactacagcggtattgcccgcaatgagagtttaacccagctcacctgcagctat
gagaccgagaaccagacccgctacctcagctgtgatctgggcaacccaatgaaggctggt
accaatctttgggcaggtctgcgtttcactgtgccacggctcaaggacacacagaaaacg
gtccagtttgatgtccagatacgcagtaaaaatgagaacaattcccacagtgaagttgtg
tcccacaagctggaggtggttgttcaggctgatgtcattcttcagggtgtgtctcgacca
gataaggtcttctttccgccggccaactggaaagtgcccaaaacttatgcagtggaacaa
gacgtggggcctgctgtggagcacatttatgagcttgtaaacaacggcccgagtcagatc
agcaacaccttattggagctgcgctgccctctccgtgttcagggccacactctcctttac
cctctggagttctccaccgaaggctccatcaactgcactgcggacaaatacatgaaccac
ctgaacctcaggctccagcgaacgtccacagagtctcccgttctggcgctgaaggcccat
gagcatcatgttgagaggagggatgtccacaagaaccagcttgttaatttgactaacctg
tcttgctctaatatggactgctggacgctgcagtgtaacgtgggtctgctggagaaggga
acgacagccatcctcaaaatgcgctcccgcatctgggccgaaaccttcactgagaaagcc
tacaaacacaatgtgctggagtgtctggccagatacagtgtgaaaaagatgccatatgca
atcctgcctaaacatttcccaacgggacacaaaaaggtggtgaccccagtggtgtggaac
aagcccgacattgagaactcagttcccctgtggatcatcatcttggctattttagctggt
ttactgcttctggctctccttatttacgtcctctacaggtttggcttcttcaagcgatct
gtaccttacggcactgccatggagaaagcacaactcaaaccacaggctgcctctgaggcc
taa
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