Kryptolebias marmoratus (mangrove rivulus): 108237716
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Entry
108237716 CDS
T05608
Symbol
aptx
Name
(RefSeq) aprataxin
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
108237716 (aptx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kmr03400
]
108237716 (aptx)
Enzymes [BR:
kmr01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
108237716 (aptx)
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
108237716 (aptx)
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
108237716 (aptx)
DNA repair and recombination proteins [BR:
kmr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
108237716 (aptx)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
108237716 (aptx)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DcpS_C
FHA_2
zf-C2HE
HIT
FHA
zf-C2H2_4
zf-C2H2
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
108237716
NCBI-ProteinID:
XP_017274865
UniProt:
A0A3Q2Z9N7
LinkDB
All DBs
Position
LG3:complement(11088890..11092893)
Genome browser
AA seq
333 aa
AA seq
DB search
MPTCWLISEEGNHKPIHLPHLQTVVVGRGPETTIKDKKCSRHQVELRAECNKGYVKVKQV
GCNPTSVDSVAVGKDNEVKIKPGQLLHVVNELHPYTVQFKEDPTGRHSNAKRPRDPTSED
RESQRDAQSTKAVKQTEKDPVSVSPGGVTKTNANVGHWSQGLKASMQDPNMQVHKDDKVV
VIKDKYPKARYHWLVLPWQSVSSLKALRGEHCDLLKHMQQVGDRMVQRCPDRGSLSFRMG
YHAIPSMSQLHLHVISQDFDSPCLKNKKHWNSFTTDYFIDSQDVIQMLETSGQVTVKDGT
GELLKLPLCCHLCRTAFPTIPALKDHLRSHFRK
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgccaacttgctggctcatcagcgaggagggtaatcacaaacccattcatctgcctcat
ttacagacagttgttgtgggtcgaggcccagaaacgactattaaagacaaaaaatgctcg
aggcatcaagttgagctgagagctgaatgcaacaaaggttatgtcaaagttaaacaggtg
ggctgtaatcccacgtctgtggactctgtggcggtgggtaaagacaatgaggtcaagata
aagcctgggcagctccttcatgtggtcaatgagcttcacccgtacactgtgcagtttaaa
gaagatcccacaggaagacacagcaacgccaaaaggccgagggatccgacttcggaggac
agagaaagccagagagacgctcagagcacgaaagcagttaaacagacagaaaaggaccct
gtgtcagtcagtcctggaggagtcacgaaaacaaatgcaaatgttgggcattggagccaa
ggcctgaaggcgtcaatgcaagaccccaacatgcaggttcacaaagatgacaaggttgtg
gtaattaaagacaaatacccgaaagctcgctaccactggctggtcctgccgtggcagtcg
gtttccagtctgaaggcgcttcgcggggagcactgtgacctgctgaaacacatgcagcag
gtaggcgaccgcatggttcagcggtgcccggaccgcggctcgctaagcttccggatgggt
taccacgccatcccgagtatgagtcagcttcatctccacgtgatcagccaggactttgac
tcgccctgtttgaagaacaagaagcactggaactcctttacaaccgactatttcatagat
tctcaggatgtcattcagatgcttgaaacgagtggacaggtcactgttaaagacggcacc
ggagagctgctgaagctgcctctctgctgtcatctgtgtcgcacggcgtttcccaccatc
cccgccctgaaggaccacctccggtctcactttcgcaaataa
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