Kryptolebias marmoratus (mangrove rivulus): 108237751
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Entry
108237751 CDS
T05608
Symbol
ubtf
Name
(RefSeq) nucleolar transcription factor 1
KO
K09273
upstream-binding transcription factor
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kmr03000
]
108237751 (ubtf)
03021 Transcription machinery [BR:
kmr03021
]
108237751 (ubtf)
Transcription factors [BR:
kmr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
108237751 (ubtf)
Transcription machinery [BR:
kmr03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
108237751 (ubtf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_5
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
108237751
NCBI-ProteinID:
XP_017274873
UniProt:
A0A3Q3ABH5
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All DBs
Position
LG12:3677456..3687197
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AA seq
744 aa
AA seq
DB search
MNGEMEVATQDQVWAQDDLLKLLEAMKVALPQKDLTKYKTSESHLDWQKVAFNSYTADMC
KQKWQEVSKEIRKFRTLTELIVDAQDYIKNPYKGKKIKKHPDFPKKPLTPYFRFFMEKRA
KYAKLHPEMSNLDLTKILSKKYRELPDKKKKKYVDDFLRDKESFVQSMMRFREEHPDLME
SMTKKGSNVPEKPKTPQQLWYNHEKKAFLKTHPDATTKDIKDSLGKQWTQLSDKKRLKWI
TKSLEQRKLYEETMREYIQQHPELNMSQEDIVKSTLTKAERHLKDKSDGRPDKPPPNGYS
MFCAELMSSMKDVPSTERMVMCSQRWKLLKQGEKDAYQKRCEQRKREYEVEMNKFLSTIS
EEEQQRVLGEEKTGFKKSSAASSSASKKKNAKTKTGPEKPKRPISAMFIFAEEKRPKLQQ
ERPDLSDSELTRFLARMWNELPDKKKEKYKRLEMVLKAESEKKEREDRSRLPDPPKTAQE
IWQQSVIGDYLARFKSDRPKAQKAMETVWSSMEKKEKIMWIKKAAEDQKRYERDLCEMRS
PAANVASMKKMKFEGEPKKPPSNGYQKFSQEMLSNGELNHLPMKERMAEIGSRWQRCPQK
EKDRYRKIAEEKQRQYKVLLEQWLASLSSQERNTYREYNSQKRRIRAKPGAPKAKKVAVE
LDDDDDDDDDDDEQEKASSEADSSSEDDDDDDDNEGDDDDDEDEEEDDNEDEEDEDDEVE
DKENKSEDSSSDSNSAGSSDSDSD
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgaatggagaaatggaggttgcgacccaagaccaagtgtgggcgcaggacgacctccta
aagctgctggaagccatgaaagtggccctgccgcagaaggacctgacgaagtacaagacg
tccgagtcccacctggactggcagaaggtggccttcaactcgtacacagcagatatgtgt
aagcagaaatggcaggaggtgtctaaagagattcgtaaattcagaactctaacagagttg
atagttgacgctcaggactacattaaaaacccttataaagggaagaagataaagaagcat
ccagacttccccaagaagcctttgactccatacttccgtttcttcatggaaaaaagagcc
aaatacgccaagctgcaccctgagatgagcaacttggatctcactaaaatcctgtccaag
aagtacagggagctgcccgacaagaagaagaaaaaatacgtcgacgacttcctgcgtgac
aaggaatcgtttgtgcagagcatgatgagattcagggaggagcatccggacctcatggag
agcatgaccaagaaaggttcgaatgtcccagagaagcccaagacgccccagcagctgtgg
tacaaccacgagaagaaggctttcctcaagacgcacccagatgccaccaccaaagacatc
aaggacagtcttggtaagcagtggacacagctgtcggataagaaaaggctcaagtggatc
accaagtccctcgagcagcggaaactgtacgaggaaaccatgcgtgagtacatccagcag
caccccgagttaaacatgtcccaggaggacatcgtgaagtccaccctgaccaaggcagag
cggcacctcaaagacaagtctgacggccggcccgacaaacctcctccgaacggctactcg
atgttctgcgccgagctgatgtcgagcatgaaggacgttcccagcacagagcgcatggtg
atgtgcagccagaggtggaagctgctgaaacagggcgagaaggatgcctaccagaaacgc
tgcgaacagcggaaacgggagtacgaagttgaaatgaacaaatttctcagtaccatatca
gaagaggagcagcagcgagttttgggcgaagagaagacgggctttaagaagagcagcgca
gccagcagttctgcctctaaaaagaaaaacgctaaaacaaagaccggtcctgagaagccc
aagaggcccatttctgccatgttcatattcgctgaggagaaacgccccaaactgcagcag
gagcgaccggacctctcggacagcgagctcaccaggttcttggctcggatgtggaacgag
ctgccagacaagaagaaggagaagtataaacgtttagagatggtgctgaaagcggagtca
gagaagaaggagcgcgaggatcggagtcgtttgccggatccgccgaagacggctcaggag
atctggcagcagagcgtgattggagactacctggccaggtttaagagtgatcgcccgaaa
gcccagaaagcaatggagaccgtctggagctccatggaaaaaaaggagaagatcatgtgg
atcaaaaaggcggcagaggaccagaaaagatacgagagggatctgtgtgagatgcgctct
ccggccgccaacgttgcgtcgatgaagaagatgaagtttgaaggggaacccaagaaacct
ccgtcaaacgggtatcagaagttctcccaggagatgctgtccaacggggagctgaaccac
ctccccatgaaggagcgcatggccgagatcggcagccggtggcagaggtgtccacagaag
gagaaggaccgttacagaaagatcgccgaggagaagcagaggcagtacaaggttctgctg
gagcagtggctcgctagcctgtcttcacaggagcgaaacacttacagagagtataattca
cagaaaagaagaatccgagccaaaccaggagcccccaaggcaaagaaagtggctgtggag
ctggatgatgatgacgacgatgatgatgatgatgacgagcaggagaaggcttcctctgaa
gccgactcctccagcgaggatgacgatgatgatgacgataacgaaggagacgatgacgac
gacgaagacgaggaggaggacgacaacgaggatgaggaggatgaggacgatgaagtggag
gacaaggagaacaaatccgaggacagcagcagcgactcgaactcagcgggctcgtctgac
tcggactcggactga
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