Kryptolebias marmoratus (mangrove rivulus): 108237907
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Entry
108237907 CDS
T05608
Symbol
rbb4l
Name
(RefSeq) histone-binding protein RBBP7 isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03082
ATP-dependent chromatin remodeling
kmr03083
Polycomb repressive complex
kmr04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108237907 (rbb4l)
03083 Polycomb repressive complex
108237907 (rbb4l)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
108237907 (rbb4l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
kmr03036
]
108237907 (rbb4l)
Chromosome and associated proteins [BR:
kmr03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
108237907 (rbb4l)
Histone modification proteins
HAT complexes
HATB complex
108237907 (rbb4l)
HDAC complexes
Sin3A-HDAC complex
108237907 (rbb4l)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
108237907 (rbb4l)
PRC2.2
108237907 (rbb4l)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
108237907 (rbb4l)
Heterochromatin formation proteins
Other heterochromatin formation proteins
108237907 (rbb4l)
Chromatin remodeling factors
NuRD complex
108237907 (rbb4l)
NuRF complex
108237907 (rbb4l)
NuRF complex (fruit fly)
108237907 (rbb4l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
ANAPC4_WD40
WD40_RFWD3
Beta-prop_DCAF12
Beta-prop_RIG_1st
eIF2A
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_SPT8
MIOS_WD40
NBCH_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
108237907
NCBI-ProteinID:
XP_017275125
UniProt:
A0A3Q3FU83
LinkDB
All DBs
Position
LG15:complement(22565593..22572793)
Genome browser
AA seq
426 aa
AA seq
DB search
MADKEVYDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVNRPEGKDY
TVHRLVLGTHTSDEQNHLVIASVQVPTDDAQFDASHYDSEKGAEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECSPDLRLKGHQKEG
YGLSWNPNLSGNLLSASDDHTICLWDIGAGPKEGKIVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKASHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENIYNDEEPDNTPAA
ELEAQG
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaagaggtgtacgatgatgcggtggaggaaagggtcatcaatgaagagtac
aagatctggaagaaaaacactccctttctgtacgacctggtcatgacgcatgcgctggag
tggcccagcctcactgtccagtggcttccagatgtcaacaggccagagggaaaagactac
actgtccaccggctggttctggggacccacacatcagatgagcagaaccaccttgtgatc
gccagtgtccaggtaccgaccgacgatgcccagtttgatgcctcgcactacgacagtgaa
aaaggagcagaatttggtgggtttggttcggtgagtggaaaaatagagatcgagatcaaa
atcaaccacgagggagaagtgaaccgagcgcgctacatgccccagaacccctgcataata
gccaccaagacgcccacatctgacgttctggttttcgactacacaaagcacccgtcaaag
ccagatcccagtggggagtgtagtcctgacctgaggctaaagggccatcagaaagagggg
tatggcctttcctggaatccaaacctcagtgggaacctactcagtgcctccgatgaccac
accatctgtctgtgggacattggggccggcccgaaagaagggaagatcgtagacgccaag
accatcttcaccggtcatacagcagtggtggaagatgtttcctggcacttgctccacgaa
tccctgttcggctctgttgccgatgaccagaaactaatgatatgggacactcggtccaac
aacacctctaaagccagtcactcagtcgacgctcacaccgctgaggtcaactgtctgagt
ttcaacccctacagcgagttcattctcgctactggctctgctgataagactgttgcactg
tgggatctgaggaatctcaaactgaagctccattcttttgagtcccacaaagacgaaatt
ttccaggtccagtggtctcctcataatgagaccatcctcgcctccagcggcaccgatcga
cgtctcaatgtctgggatctcagtaaaattggggaggagcagtctgcagaggatgctgag
gacggcccaccagagctcctgtttatccatggcggccatacagcaaaaatatctgacttc
tcctggaacccaaacgagccctggatcatctgctccgtgtccgaggacaacatcatgcaa
gtctggcaaatggcagagaatatctacaacgacgaagagccagacaacacccccgccgca
gagctggaggctcaaggatga
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