Kryptolebias marmoratus (mangrove rivulus): 108238102
Help
Entry
108238102 CDS
T05608
Symbol
tcf7
Name
(RefSeq) transcription factor 7 isoform X5
KO
K02620
transcription factor 7
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04310
Wnt signaling pathway
kmr04520
Adherens junction
kmr04916
Melanogenesis
kmr05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
108238102 (tcf7)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
108238102 (tcf7)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
108238102 (tcf7)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108238102 (tcf7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kmr03000
]
108238102 (tcf7)
Transcription factors [BR:
kmr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
108238102 (tcf7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
108238102
NCBI-ProteinID:
XP_017275448
LinkDB
All DBs
Position
LG13:complement(5836434..5905608)
Genome browser
AA seq
530 aa
AA seq
DB search
MPQLSSGGGDDLGANDEMISFKDEGEQEEKIQENAFTERDLADLKSSLVNESEINQREAV
RRGQQGEQRVFPDKQREHLDGVSKQQDGGMYKSPAYPGYPFLMLPDPYLPNSSVSPSSNK
VSVVQQSHGMHPLTSLLPYSNDHFSPSPPHLPTDMSQKTGVHRQSQDLSGYYSLPPGGVG
QITPSMSWQSQPVYPALSPCGFRQPYSSSLSSASSYSRFPHSLMLGPSGVHPTGIPHPAI
VPPSGKQEHEQYDRSMYMKPQVEVKREKEPKKPVIKKPLNAFMLYMKEMRAKVIAECTLK
ESAAINQILGRRWHALTREEQAKYYELARKERQLHMQLYPTWSARDNYEAGLSGVAGEKN
KADWGKKKRRKREKQQDSNADPGSPKKCRARFGLNQQTDWCGPCRRKKKCIRYLQGGGCP
SPASSDLSAIDSPPSPSPARHRLYQRPPSPGCSPPPSSPSTRLPPSPHTRSHARFPPEQS
AGKRAADFRQPAAKRAHAHLELSGKQTLCSTVLSAAKVAGLSLKVLTETH
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgcctcagctcagcagcggcggaggagacgacctgggagcgaatgatgagatgatatcg
ttcaaagacgaaggcgagcaggaggagaaaatccaggagaacgcgttcacggagcgggac
ctggccgacctgaagtcctccctggtgaacgagtcggaaataaatcagagagaggcggtc
agacggggacagcagggcgagcagagggtcttcccggacaaacagcgagagcatctcgac
ggagtgtcgaagcagcaagatggaggcatgtacaagtctccggcgtatccagggtacccg
ttcctgatgctgccagacccttatctccccaacagctccgtttctccatcctccaacaaa
gtgtcagtggtgcagcagtctcacgggatgcacccgctgacctccctgctgccctacagc
aacgaccacttcagcccgagtcctccacacctgcccacagacatgagccagaagacaggc
gttcacaggcagtcccaggacctctcagggtattactccctcccaccaggtggtgtcggc
caaatcactccctccatgagctggcagagccagcccgtctaccctgctctgtccccctgt
ggattcaggcagccctactcctccagtctgtccagcgcctcgtcctactccaggtttcct
cactccctgatgctcggcccgtcaggagtgcatcctacagggatcccccacccagctata
gtgcctccttcaggcaaacaggagcatgagcagtacgacaggagcatgtacatgaagccg
caggtggaggtcaagcgcgagaaggagcccaagaagccggtcatcaagaagcccctgaac
gccttcatgctctacatgaaggaaatgagggcgaaggtcatcgccgagtgcacgttaaag
gagagcgccgccatcaaccagatcctgggacggcggtggcacgctctgacccgggaggag
caggccaagtactacgagctggccaggaaagaaagacagctgcacatgcagctctaccca
acctggtctgctagggacaactacgaggcgggccttagcggggtcgcaggggaaaagaat
aaagctgattggggcaagaagaagaggagaaaaagggagaagcagcaggactccaacgca
gacccgggctcccctaagaaatgccgggctcgcttcggcctcaaccaacaaacggactgg
tgcggtccttgcaggaggaaaaagaagtgcattcgctaccttcaaggaggaggctgcccc
agcccagcttcttcagatctaagtgctatagactctcccccctccccttctcctgcacgc
caccgcctctaccagcggcccccctccccgggctgctcgccgccgcccagctccccgtcg
acgcgcctccccccgtctccgcacacacgctcgcacgcacgcttccccccggagcagtct
gccggcaagcgggcggcggacttccgccagcccgcggccaaacgcgcccacgcacacctg
gaactgtcgggcaagcagacgctgtgctccacggtgctgtctgccgccaaggtggcagga
ctgtccctcaaagtgctgacagagactcactga
DBGET
integrated database retrieval system
