Kryptolebias marmoratus (mangrove rivulus): 108238143
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Entry
108238143 CDS
T05608
Symbol
snrpd2
Name
(RefSeq) small nuclear ribonucleoprotein Sm D2
KO
K11096
small nuclear ribonucleoprotein D2
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108238143 (snrpd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
kmr03041
]
108238143 (snrpd2)
03032 DNA replication proteins [BR:
kmr03032
]
108238143 (snrpd2)
Spliceosome [BR:
kmr03041
]
Complex A
U1 snRNP components
Sm proteins
108238143 (snrpd2)
U2 snRNP components
108238143 (snrpd2)
Complex B
U1 snRNP components
108238143 (snrpd2)
U4/U6.U5 tri-snRNP components
108238143 (snrpd2)
Complex C
U2 snRNP components
108238143 (snrpd2)
DNA replication proteins [BR:
kmr03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
108238143 (snrpd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
GIT1_C
Motif
Other DBs
NCBI-GeneID:
108238143
NCBI-ProteinID:
XP_017275510
UniProt:
A0A3Q3EJ34
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All DBs
Position
LG2:complement(20077018..20079383)
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AA seq
118 aa
AA seq
DB search
MSLLTKPKSEMTPEELQKREEEEFNTGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFD
RHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIVVLRNPLITGK
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgttaacaaagcccaagtcggagatgactcccgaggagctgcagaaacgtgag
gaggaagagttcaacactgggccgctgtcggtgctcacccagtcggtgaagaacaacact
caggtcctcatcaactgtcgcaataacaagaagctgctgggaagagtcaaagcgtttgac
aggcattgcaacatggtcctggagaacgtgaaagaaatgtggacggaagttcccaaaagt
ggaaagggaaagaagaaatcaaagcccgtaaataaagaccgctacatttctaaaatgttc
ctcaggggcgactccgtgatcgtggtgctgaggaatcctctcatcacaggaaaatga
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