Kryptolebias marmoratus (mangrove rivulus): 108238293
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Entry
108238293 CDS
T05608
Symbol
fzr1b
Name
(RefSeq) fizzy-related protein homolog isoform X1
KO
K03364
cell division cycle 20-like protein 1, cofactor of APC complex
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04110
Cell cycle
kmr04120
Ubiquitin mediated proteolysis
kmr04914
Progesterone-mediated oocyte maturation
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108238293 (fzr1b)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
108238293 (fzr1b)
09150 Organismal Systems
09152 Endocrine system
04914 Progesterone-mediated oocyte maturation
108238293 (fzr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
kmr04121
]
108238293 (fzr1b)
Ubiquitin system [BR:
kmr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
108238293 (fzr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_EML
EIF3I
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_WDR36-Utp21_2nd
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_WDR36-Utp21_1st
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_RIG_1st
Beta-prop_WDR41
Beta-prop_SCAP
Tricorn_2nd
Beta-prop_VPS8
Beta-prop_SPT8
WD40_RFWD3
DUF4081
Ge1_WD40
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
108238293
NCBI-ProteinID:
XP_017275753
LinkDB
All DBs
Position
LG20:complement(19877180..19884752)
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AA seq
531 aa
AA seq
DB search
MTTFRRSQRWGTCADFLTGRERRCEGGGGEGSGGVLLPASSPEEMDQDYERRLLRQINHQ
NLPAESRLSKCLGAACSPASVKSGDRFIPTRAGSNWSINFHYANENCRSPAQNHKAKDAS
SDSSKDAVAYAALLRNELLGAGIEPGGDPHSDDRRHAVLAQDSHGLFRYTVHTKRVPFDS
DNEVSPYSLSPLSNKSHKLLRSPRKPARKISKIPFKVLDAPELQDDFYLNLVDWSAGNLL
SVGLGACVYLWSACTSQVTRLCDLSVDGDSVTSVCWNERGSLVAVGTHKGYVQIWDAAGG
RKLTCLEGHSARVGALAWNGEQLSSGSRDRVILQRDVRTPPSAERRLQGHRQEVCGLKWS
PDHQHLASGGNDNKLLVWNSSSLVPVQQYSDHLAAVKAIAWSPHQHGLLASGGGTADRCL
RFWNTLTGQALQSTDTGSQVCNLAWSKHANELVSTHGYSQNQILVWKYPSLTQVAKLTGH
SYRVLYLAVSPDGEAIVTGAGDETLRFWSVFSKTRCTKESKSVLNLFTRIR
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgtttcggcgttcccagagatgggggacctgtgcggatttcctcaccgggagg
gagcggaggtgtgaaggggggggcggggagggcagcggaggggtcttgctgcctgctagt
agtcctgaggagatggaccaggactacgagagacggctgctgaggcagatcaaccaccag
aacctgcctgcagagagccgcctcagcaagtgtttaggcgctgcctgcagccctgccagt
gtgaagtcaggggatcgctttattcccacccgagctggaagcaactggagcatcaacttc
cactacgccaacgaaaactgtcgctcccccgctcagaaccacaaagcgaaagatgccagt
tcagactccagcaaagatgccgtggcgtacgctgccctgctgaggaacgagctgctggga
gccgggatcgagccggggggggacccgcactcagacgaccggcggcatgccgtcctcgct
caggactctcatggcctttttaggtacactgtccacactaagagagtgccttttgatagc
gataacgaagtctccccgtactctctctctccactcagcaacaagagtcacaagctgctc
cgctcgccccgcaaaccagcacggaagatctccaagatccccttcaaagtgctggacgcc
ccggagctgcaggatgatttctacctcaacctggtggactggtcggcggggaacctgctg
agcgtcggcctgggagcctgcgtgtacctgtggagcgcctgcaccagccaggtgacgaga
ttatgtgatctgtcagtggacggagactccgttacatctgtctgttggaacgagagggga
agtctcgtcgccgttggaacccacaagggctacgttcagatctgggatgcagcaggaggc
aggaagctgacctgcctggagggacactcggctcgagtaggtgccctggcgtggaatggg
gagcagctgtcatctgggagccgggacagagtgatcctgcagcgggacgtcagaacaccc
ccctctgctgagaggaggctccaaggtcacaggcaggaagtgtgtggtctcaaatggtct
ccggaccaccagcaccttgcttctgggggcaacgacaacaagttgttggtgtggaacagc
tccagcctggtgcccgtgcagcagtacagtgaccacctggcagcagtgaaggccattgcc
tggtcccctcaccaacacgggctgctggcgtcgggcggcggcaccgccgaccgctgcctg
cggttctggaacaccctgacgggtcaggcgctgcagagcaccgacaccggctctcaggtc
tgcaacctggcctggtccaaacacgccaacgagctggtgagcacccatggctactctcag
aaccagattctggtgtggaagtatccgtcgttaacacaggtggccaagctgacgggtcac
tcctacagagtcctgtatctggctgtgtctccagacggagaggccatcgtcacaggagcg
ggagacgagacgctacgtttctggagcgtcttcagtaagacgcgctgcacaaaggaatca
aaatcagttctcaacctcttcacaagaatccggtag
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integrated database retrieval system