KEGG   Kryptolebias marmoratus (mangrove rivulus): 108238383
Entry
108238383         CDS       T05608                                 
Symbol
ncbp2
Name
(RefSeq) nuclear cap-binding protein subunit 2
  KO
K12883  nuclear cap-binding protein subunit 2
Organism
kmr  Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03013  Nucleocytoplasmic transport
kmr03015  mRNA surveillance pathway
kmr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:kmr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108238383 (ncbp2)
  09122 Translation
   03013 Nucleocytoplasmic transport
    108238383 (ncbp2)
   03015 mRNA surveillance pathway
    108238383 (ncbp2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:kmr03019]
    108238383 (ncbp2)
   03041 Spliceosome [BR:kmr03041]
    108238383 (ncbp2)
Messenger RNA biogenesis [BR:kmr03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Cap binding complex
     108238383 (ncbp2)
Spliceosome [BR:kmr03041]
 Common components
  Common spliceosomal components
   Cap binding complex
    108238383 (ncbp2)
SSDB
Motif
Pfam: RRM_1
Other DBs
NCBI-GeneID: 108238383
NCBI-ProteinID: XP_017275892
UniProt: A0A3Q3AAC6
LinkDB
Position
LG24:complement(2697555..2699994)
AA seq 164 aa
MSAKLNALNSDSYTEISQYRDQHFKGNRYEQEKLLKQSNTLYVGNLSFYTTEEQVHELFA
KCGDVKRIIIGLDKVKKTACGFCFVEYYTRLDAENAMRFVNGTRLDDRIIRTDWDAGFKE
GRQYGRGKSGGQVRDEYRQDYDPARGGYGKLAQQHRTTEGRNSF
NT seq 495 nt   +upstreamnt  +downstreamnt
atgtctgctaaactaaacgctttgaatagtgattcttacaccgagatcagtcagtacaga
gatcagcattttaagggtaaccgatatgaacaagagaagctactaaagcagagcaacact
ttgtatgtcgggaacctgtccttttacaccacagaggagcaggtacacgagctgtttgct
aaatgtggcgacgtcaagcgcatcatcattggcctggataaagttaagaagactgcctgt
ggattctgctttgttgaatattacacacgattggacgcggaaaacgccatgcgcttcgtt
aatggtacacggctggacgaccgtatcatcaggacagactgggacgcgggcttcaaggag
ggcaggcagtacggtcgcggcaaatctggaggacaggtgagagatgagtacaggcaggac
tacgacccagccagaggtggctacggtaagctggctcagcaacatcgaaccacagaagga
cgcaattctttttag

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