Kryptolebias marmoratus (mangrove rivulus): 108238394
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Entry
108238394 CDS
T05608
Symbol
ushbp1
Name
(RefSeq) colorectal mutant cancer protein
KO
K21881
Usher syndrome type-1C protein-binding protein 1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
kmr03037
]
108238394 (ushbp1)
Cilium and associated proteins [BR:
kmr03037
]
Primary cilia and associated proteins
USH complex and associated proteins
108238394 (ushbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USHBP1_PDZ-bd
PEPcase
ANIS5_cation-bd
Motif
Other DBs
NCBI-GeneID:
108238394
NCBI-ProteinID:
XP_017275908
UniProt:
A0A3Q3AR82
LinkDB
All DBs
Position
LG24:complement(5400310..5408132)
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AA seq
689 aa
AA seq
DB search
MEDSRRSRCNSLDTSSVFKKEVLNPGDYMTFDPEGSDPLMNLEPTPAEVAQCEAEVGILL
NIIADLNKKMGSLKAPSEPGDLRSPSPSRPLVPDLLSHRLVRSSPDRNAASIVTSKHPLT
NQGGGGVVWTKLEEVLSSVEDSISFRRTWAAPITATDHNKHKEHLRAAQENWAKATQILE
EMEKEFGISCPLGMPKDQHLEDLLDAEKPETAPRSNMQEGLQRTQSSVCPSEEEKNKLTS
LHKVWTSGSFSPSYRPPAGARSPDWASPSYPGSPLPYRRTSRAVKPLSLGDSLCPSPISL
ESETERLNRCIERLKARNERLTAALERRKGESEQISLKLNRLESDCSALQMALRYSEECE
EAYSELLSLYEAKRQQNAPLQTDSAEPVGDRQQTDSPSTQLRKMGTEELSTSFSTIGVTE
ATQAQSHTKQRTPEPVDRKEALRQQIERLKKDRAAVCLPKRDLGAEGRPRSETCPTAGSR
WTHVPKDNSRSPDNKREKASLFYELISVREEMSDLRALIRLKEKELRCLEWSLMGQKTQE
AAGVFIPESLREEVEDRKTEQQRFCENAAKVGSDGEINPLTRPILKELQAVLQREQALKK
RLGMIHDSLSTALSDGSPNRKDNAEQIARLTQAHSKALSSYRQIRRKYREQVWRLEQKVA
AMMEGQHNQSEAAKDPEEAVEWKREETVL
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggaggactccagacggagcagatgtaacagcctagacaccagctcagtgtttaaaaag
gaggtgctgaaccctggcgactacatgacctttgaccctgagggttctgaccctctgatg
aacctggagcccacaccagcggaggtggctcagtgtgaggctgaagtgggcatcctgctc
aacatcattgctgatctgaacaagaagatgggctcactaaaggctccgagtgaaccaggc
gacctgagatcaccaagtccatccaggcctctggttccagaccttctgtctcatcggctg
gtcagaagcagcccagacaggaacgctgcatccatcgtcacatctaaacatccactgacc
aaccaaggaggcggtggcgtcgtctggacaaaactggaggaggttttatcatcagtggaa
gactccatcagcttcaggaggacgtgggccgctccaatcacagccactgatcacaacaaa
cacaaagagcacctgagagcagctcaggaaaactgggctaaagccactcagatactggag
gagatggagaaggagtttgggatctcgtgtccattaggcatgccgaaggaccagcacctg
gaggacttgctggatgcagaaaaacctgagactgctccgagaagcaacatgcaggagggg
ctgcagagaacacaaagctcagtctgtccatcagaggaggagaaaaacaagctgacgagc
ctccacaaggtctggacgtctggcagtttctctccatcctaccgacctcctgctggggct
cgcagtccagactgggcttctccttcctaccctggttcacctttaccctacagaaggacg
tcccgagccgtgaaacccctgtctttgggtgacagtctgtgtcccagccccatcagtctg
gagtcggaaacagagcggctgaacagatgcattgagaggctgaaggccagaaatgaacgt
ctgactgcagctctggagcgaaggaaaggagagtcggagcagatcagcctgaaactaaac
cgactggagtctgactgctcagccctgcagatggctctcagatacagtgaggagtgtgag
gaggcctacagtgagctactgtcactttatgaggccaaaaggcagcaaaacgctcctctg
cagacagactcagcagagccagtcggtgacaggcagcagactgacagtccatcaactcag
ctcaggaaaatgggaactgaagagttgtccacctccttctccacaataggagtcacagag
gcaacgcaagcacaaagtcatacaaagcagagaacacctgaaccagtggaccggaaagaa
gctctccggcaacaaatcgagcgcctgaagaaggaccgagcagccgtttgtctgcctaag
cgtgatctgggagcagagggcaggccacgctcagaaacgtgtccgacagctgggtcaaga
tggacccatgtgccaaaggacaacagcagatctcctgacaacaagagggagaaagcttcc
ctcttttatgaacttatctcagtcagggaggagatgtccgatctgcgagctctgatccgc
ctgaaggagaaggagctgaggtgtctcgagtggagtttaatgggtcaaaagacgcaggaa
gcagctggagtttttatcccagaaagtctcagagaggaggtggaggatagaaagaccgaa
caacagagattttgtgagaacgctgctaaagttggcagcgacggagaaatcaatcctcta
accagacccattctgaaggagctacaggcagttctacagagggaacaagcactgaagaag
aggctgggtatgattcatgactctctgagcacagctctgtcggacggctcccccaacagg
aaggacaacgcagagcagatcgctcgcctcacacaagctcacagcaaagccttgagctcg
taccggcagattcgcaggaagtaccgggagcaggtgtggaggctggagcagaaggtggca
gccatgatggagggtcaacacaaccagagtgaggcagccaaagatccagaggaagctgtg
gagtggaagcgggaggagactgttttataa
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