Kryptolebias marmoratus (mangrove rivulus): 108238417
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Entry
108238417 CDS
T05608
Symbol
recql4
Name
(RefSeq) ATP-dependent DNA helicase Q4
KO
K10730
ATP-dependent DNA helicase Q4 [EC:
5.6.2.4
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kmr03032
]
108238417 (recql4)
03400 DNA repair and recombination proteins [BR:
kmr03400
]
108238417 (recql4)
Enzymes [BR:
kmr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
108238417 (recql4)
DNA replication proteins [BR:
kmr03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
108238417 (recql4)
DNA repair and recombination proteins [BR:
kmr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
108238417 (recql4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
Drc1-Sld2
zf-CCHC
zf-CCHC_3
ResIII
zf-CCHC_5
Motif
Other DBs
NCBI-GeneID:
108238417
NCBI-ProteinID:
XP_017275953
LinkDB
All DBs
Position
LG5:7981121..7991679
Genome browser
AA seq
1532 aa
AA seq
DB search
MDRYNEVKTLLKGWEQGFVRQHQRKPNKEDIDRAPEETRNLYKEYKSLKQAKENSSTDAS
SNQTKNTTQLSSTYKESDCWGAHLNRKAMPVSAPKLTSQDRDNLMASSQYYGLKLKSNLV
ALSKERLASLKKPHRTGRVPLNSLTDCQTPSSPSSSTETEKTPAVDRDLGLFSPRGMKPC
QGLLPSKLLRSGEPEEKFKPFEPVPDAVSSCSNTNSDGDSKDISSKLKPTSTTSPPTTSS
ALLLSLSPQHKFESTEKLIKSAGDREDGSHMLESPHRSPDPGPSASFSGGLVKRPSLANR
LSFVDRKWLERCQVFGEMEAEERPGGGNQEIKMETREKKEQETEAGRAGKDEKDEDGERR
ELKDFETEERFANDVPKSARQHTGKSKGEGERKGKRNKDEEMERGEAELAAPGGDGESRP
KSQSAKKRSRKRQREGDNTEGSSPVEEGVKKKRRNRKMKEENSVNSNDGGGQKKRRAKRK
EKDHEEEDEEKETKVPTKVPQENLFGEMEDEFRTNRTCQTQPVRARVKGAEGNFVKINLK
KKSHVKGYALRGMALRKQLYMQKFQLKGERFGGGGGHFGRGRRGGFRGGLSRQGDTCFKC
GGTGHWAMDCRGPAPPPPVSEEQSAEEEPFELPTLEDVARATGTLRPHPLVASPCVGNER
QEKEENSSCEDDVLLNLIRPDYERPAPPPPVQPLYHLTEDGRVQETPDEVCSALRALGYQ
SFRPGQEKAIMRILSGLSTLVVLSTGMGKSLCYQLPAYLYAQRSKCITLVISPLVSLMDD
QLSGIPTKLKAACIHSNMTMKQREAVIEKVKSGQVCVLLLSPEALVGGGGSGAGCLPSAQ
ELPPVAFACIDEAHCVSEWSHNFRPCYLRLCKVLRERLGVRCLLGLTATATLSTALDIAH
HLDISDQDGIAVRSAAVPPNLNLSVSTHKEKDQALVSLLKGDRFGCLDSVIVYCTRREET
VRVAALLRTCLQGVLLKENTQTSSESKTQNNSVDQRKKELARKKIRKPLKWQAEAYHAGL
SGAERRRVQNNFMCGELRIVVATVAFGMGLDKSDVRGIIHYNMPKSFESYVQEIGRAGRD
GEPAHCHLFLDPEGGDLHELRRHIYADTVDYYTVKKLVQRVFPACKCKKIHQKQQELWED
MEDSELLEVMDVCDQERHVHQPAQQDTGQTENKESTVLQMLDQNSGERVLREVIDEEKEK
KEEDESKTAAAGKEEEADWPKERVCHTHEQAIPIQETVEALDITEEGVETLLCYLELHPQ
RFVELLHPTLSVCTVKCYEGPRQLQKITKICPPVAVALVWRRMAGERVLSSNQLEFDVVK
VADTMGWQLPVVKRGLRQLQWSTDRGGGRSGIHVEFSSPSFHFRSYGDLSDEEMDRVCQF
LHDRVQEQERTQLFQLTACFKAFKSVAFKSVTSCVDDLDESRSLQLKNLLSEYFDQRRDR
DHTLEPLDLEELNKYKLLDWEDQIRADIRSFLSCRSDERFSGRAVARVFHGIGSPCYPAQ
IYGKDRRFWRKYIQFDFNQLIRIATQEILHFK
NT seq
4599 nt
NT seq
+upstream
nt +downstream
nt
atggatcgctacaacgaggttaagactctgctgaaaggttgggagcaggggtttgtcaga
cagcaccagaggaaacccaacaaggaggacattgatcgagctccagaggagacgagaaat
ctgtataaggagtacaagagcttaaaacaagcgaaagagaacagcagcactgatgcatcc
agcaatcaaactaaaaacacaactcagctcagctcaacttataaggagtcggattgttgg
ggcgcccatttgaatcgtaaagcgatgccggtgtccgctccaaagctgacttcccaggac
cgagacaatctgatggcttcttctcaatattatgggctaaaacttaaaagcaaccttgtt
gcactcagtaaggagaggctggcttcactgaagaaaccacaccgaacgggtcgagttcct
ctcaattctttgacagattgtcagacaccaagcagcccgagttcatccactgagacagaa
aagaccccagctgttgatcgagacctcggcctcttctctccaagaggaatgaagccatgc
cagggtttactgccttccaaattgctccgttcaggagagcctgaggagaaatttaaacca
tttgaacctgtacctgatgctgtcagtagctgcagcaacactaattctgacggtgatagt
aaagacattagctccaagttaaaacccacctctacaacatctcctccaaccacatcctct
gccctcttgttgtctttgtctccccaacataagtttgaaagcacagagaagttaattaaa
agcgcaggagacagagaagatggttctcacatgttggaaagtccacacaggagtcctgac
cctggtccttcagctagtttcagcggggggttggttaaacgtccctctctcgctaacagg
ctgagcttcgttgacaggaagtggctggaaagatgtcaggtgttcggagagatggaagct
gaggagaggcccggaggaggcaaccaggaaataaaaatggagacaagagagaaaaaagag
caagaaacagaagctggacgggcgggaaaagacgagaaagatgaagacggagaaagaaga
gagttaaaagactttgaaacagaggaaaggtttgctaatgatgttcctaaatctgcacga
caacatactggaaaaagcaaaggagagggagaaagaaaagggaaacggaacaaagatgag
gagatggaaagaggagaggcagagcttgctgcaccaggaggcgacggtgagagtcgtccc
aaatcccaaagtgcaaagaaaagatccaggaagaggcagagagagggggacaacacggag
ggtagcagtccagtcgaggaaggagtgaaaaagaagagaaggaatcgtaaaatgaaagag
gagaactctgtaaactcaaatgatggaggaggacagaagaaaaggagagccaagagaaaa
gaaaaagatcatgaagaggaggatgaggagaaagaaaccaaggttccaacaaaggttccc
caggagaatctgtttggagaaatggaggacgagttcagaacaaacagaacgtgtcaaaca
caacctgtcagagccagagtaaaaggtgcagagggtaactttgtgaagataaacctgaaa
aagaaatctcatgtcaaaggatacgcgctaagagggatggctttaaggaaacagctgtac
atgcagaagttccagctgaaaggcgagcgttttggtggaggtggtggacattttggcaga
ggacgaagggggggcttcagaggggggctcagtcggcagggcgacacctgctttaaatgt
ggagggacgggacactgggctatggactgcaggggaccagcccctccgcctcctgtttct
gaggagcagtctgcagaagaagagccattcgaactgcccaccctggaggatgttgccagg
gcaacgggaacgctgcgaccgcacccactggtggcatccccctgtgtcggtaacgagcga
caggaaaaggaagagaacagcagctgtgaagatgacgtgttgctgaacctgattcgtccc
gactacgagcggcctgctcctccacctcccgtacaaccactttatcatcttacagaagat
gggagagttcaggaaacacctgatgaggtctgctcagctttaagagcccttggatatcag
tcgttcagaccgggacaggagaaggccatcatgaggatcctgtcaggcctctccaccctg
gtggtgttatctactggaatgggtaaatcgttgtgctatcagctgccagcttacctttac
gctcagcgatcaaaatgcatcactttggtcatttcacctctagtttctctaatggacgac
cagctgtcaggtattcccaccaagctaaaagctgcctgcatccactcaaacatgacgatg
aaacagagagaagccgtgatagaaaaggtgaagtccggccaggtgtgtgtgttgctcctc
tctccagaggctttggttggtggaggaggttcaggcgcaggatgtctgccctcggctcag
gagctccctccggtggccttcgcttgtatagatgaggctcattgcgtttcagagtggtca
cacaacttcagaccctgctacctaaggctttgtaaggtcctgcgggagcgcctgggggtg
cggtgcttgctgggactcacagctacagccactctgtctactgctctggacatcgctcat
catttggacatcagtgatcaggacggcatcgctgtgagatctgcagctgtgcctccgaac
ctgaatctgtctgtgtccacgcataaggaaaaggatcaggctctagtttccttgctgaaa
ggggatcgttttggttgtttggactctgtcattgtttactgcaccagacgagaggagact
gttcgtgtggctgcactgctcaggacctgcctgcagggggtgctgctgaaagaaaacacc
caaacaagcagcgaaagcaaaacgcagaacaactcagttgaccaaagaaaaaaagaactg
gcacggaagaagattcgtaaacccctgaaatggcaggcggaggcgtaccacgctggcctg
tcgggggccgagcgtcgccgcgtccaaaacaacttcatgtgcggggagctcagaatcgtc
gtggccaccgtggcgtttggtatgggcctggataagtccgacgtccgaggtatcatccac
tacaacatgccaaagagctttgagagttatgttcaggaaattgggagagcagggagagat
ggagaaccggctcattgccacctcttcctggaccctgagggtggtgacctccacgagctc
cgtcgccacatctatgcagacaccgtcgactactatacagtcaaaaaactggtccagaga
gtttttcctgcatgcaaatgtaaaaagatccaccaaaaacaacaagaactctgggaggac
atggaagactctgagctgctggaggtgatggatgtgtgtgaccaggagagacacgtccac
cagcccgctcagcaagacaccggacaaacagagaataaggaatcgactgttttacagatg
ctggatcaaaactcaggcgagcgagtcctccgtgaggttattgatgaagaaaaggaaaag
aaagaggaggatgagtcgaaaacagctgcggcgggtaaagaggaggaagctgattggccg
aaagagcgagtgtgtcacactcatgaacaagcgattcccatccaggagactgtcgaggct
ctggacatcacagaggaaggtgtggaaacgctgctctgctatctggagctgcatccacag
cggtttgttgagcttcttcaccccacgctgtctgtgtgtacggtcaaatgctacgaagga
cccagacagctgcagaaaatcactaaaatctgccctccggtcgctgtggcgttggtctgg
aggaggatggccggtgagcgagtgttgagttctaatcagctggagtttgacgttgtcaag
gtagcggacacgatgggatggcagcttcctgttgtaaagagaggactcagacagctgcag
tggagcaccgacagaggaggcggaagaagcggcatccacgttgaattctcctccccttcc
ttccacttccgttcctatggcgatctgagcgacgaggagatggacagagtttgtcagttc
ctccacgatcgagtgcaggagcaagagagaacgcagctcttccagcttacggcgtgtttc
aaggcctttaagagtgttgccttcaaaagtgtgacttcctgtgtggatgatttggacgag
agtcgcagtttgcagctgaaaaaccttctgtctgagtacttcgaccagaggagggaccga
gatcacactctggaacctctggacctcgaggagctcaacaaatataagctgttggactgg
gaggatcagatcagagccgacatccgaagttttctctcctgccgaagtgacgagaggttt
tctggacgagccgttgctagagtctttcacgggattgggagtccttgttatcctgctcaa
atctatggcaaagatcgacgtttttggaggaaatacatccagtttgacttcaaccaactc
atcagaatcgccacccaggagatccttcacttcaagtga
DBGET
integrated database retrieval system
