Kryptolebias marmoratus (mangrove rivulus): 108238448
Help
Entry
108238448 CDS
T05608
Symbol
cachd1
Name
(RefSeq) VWFA and cache domain-containing protein 1 isoform X1
KO
K28855
VWFA and cache domain-containing protein 1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
kmr04040
]
108238448 (cachd1)
Ion channels [BR:
kmr04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
108238448 (cachd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CACHD1_mid
CACHD1_C
MCP-like_PDC_1
CACHD1_middle
dCache_1
VWA_N
VWA_2
VWA
VWA_3
DUF695
Motif
Other DBs
NCBI-GeneID:
108238448
NCBI-ProteinID:
XP_024862626
UniProt:
A0A3Q3AFV1
LinkDB
All DBs
Position
LG24:4217163..4289093
Genome browser
AA seq
1307 aa
AA seq
DB search
MARRSADRARAAVRGSRRGLGGGSLRASWRRFVFVCLALSAWGSCRADTDFSILEEAQVL
SEQMKKLSSQELGVFTMQRIFNSFVYTEKTSNGETEVQQLAKKIREKFNRYLDVVNRNKQ
VVEASYTAHLTSPLTAIQDCCSIPASMMEFDGNFNTNVSKTICCDRLSPNVNSRAFNPGR
DLNSVLADNLKSNPGIKWQYFSSEEGIFTVFPAHKFQCKGNYEHRSRPVYVSAVRPQSKH
IVVMVDHGASITDTQLQIARDSALVILNSVDEHDKISILSVAETVRSCSLDQCYKSLLSP
ATSETKRKMSTFISNIKVFNGATQHAAGFQKAFQLLRNTSSLSKQSSTTDMVIIYLSSGV
TSRDSSELEKRATLSVVREENRHLNNSVMILTYALMNEGVTGLKELAFLRDLAEQNSVKY
GVDRTFERERSSAASPPGSSGASVMPVVKGSMMVLNQLSNLETTVGRFYINLPNRMIDLA
CFSLPYSDPMGDGFIMTVSRPCYFGNMLLGVVGVDVNLAYILEDVTYYQDSLASYTFLID
NKGYTLMHPSLTRPYLMTEPPLHTDIIHYENIPGFPAVRQNILSLPLGSQVIAVPVNSSL
SWHTNRLRDNRKDAYNVSYAWKLVQDTSFILCIVYVQPEIPVKQLKNLNTAPSSKLLYHR
LDLLGQPSSCLHFKQLATVESPTVMLSAGSFSSPYEHLSQPETKRMVEHYTAYLSDNTRL
IANPGLKSSVRNEVMATSHVTDEWMTLMEMSSLNCYIVRRYIATPSGVLRIYPGSLMDKA
FDPTRRQWYQHAVANPGLITFTGPYLDVGGAGYVVTISHTIHASSSQMAPGYAVAVMGID
FTLRYFYKVLLDLLPICNQDKGHKIRCFIMEDRGYLVAHPTLIDPKGHAPAEQQHITHKE
PLVANDILNHPNFVKKNLCNSFSDRTVQRFYKFNTSIMGDLTNLVHGSHCSKYRLTRIPG
TNAFAGIVNETCDSLAFCACSTVDRLCLNCHRMEQNECECPCECPLEVNECTGNLTNAEN
RNPSCEVHQEPVSLNVIDPSLHDTLPQCINTRCSQRYTSSDCFGVLDCEWCMVDSDGKTH
LDKPYCALQKECFGGIVGAKSPYADSLGLIDEEVASLNMIKSAPVGPVAGGIMGCIMVLV
LAVYAYRHQIHRRSHQHMSPLAAQEMSVRMSNLDNERDERDEDSHEDRGIISNTRFIAAV
IERHTHTPERRRRYWGRSGTESDHGYSTMSPQEDSENPPGNNDPLSAGVDVSNHDDDLDL
DTPPQTAALLSHKFHPYRHTHTHHHPLHTHTHHLQAAVTVHSVDAEC
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggcggagcgcggaccgagctcgggccgctgtccggggctcgcgccgcgggctc
ggcggcggctcgctccgggcttcgtggcggcgcttcgtcttcgtgtgtttggctctgtcc
gcctggggctcctgccgagcggacacggacttctctatcctggaggaagctcaagttttg
tcggagcagatgaagaagctttcctcgcaggagctgggagtctttaccatgcagaggatt
ttcaactcgttcgtgtacaccgagaagacatcaaacggagagacagaagtgcagcagctg
gctaagaagattcgggagaagtttaaccgttacctggacgtggtgaacaggaacaaacag
gtggtggaggcctcgtacaccgcccacctcacctctccactcactgcaatacaggactgc
tgctccataccagcgtctatgatggagtttgatgggaactttaataccaacgtctccaag
accatctgctgtgacagactctctcccaacgttaacagcagagctttcaacccagggcga
gacctcaactcagtgttggctgacaacctgaagtccaacccggggataaagtggcagtac
ttcagctcagaggagggcatctttacagtcttccctgcccacaagttccaatgcaaagga
aactacgagcatcgcagccgaccagtgtacgtgtctgcagtccgtccccagtcgaaacac
attgttgtgatggtggatcatggagcctctatcactgacacccagctgcagatcgcccgg
gactctgcattggtcatcctcaattctgttgatgaacacgataagatctccatcctgtcg
gtggcagagacggttcgctcctgttctttggaccagtgctataagagtctgctgtctcca
gccaccagcgagactaagaggaagatgagcaccttcatctccaacatcaaggtctttaat
ggagccacccagcatgcagctggcttccagaaggctttccagctgcttcgcaacaccagc
agcctgagcaaacagagcagcaccacagacatggttatcatctacctgtcatctggtgtt
acgtctcgagactcgtcagagctggagaagagagccaccctcagtgtggtcagagaggag
aaccgacacctcaacaactctgtcatgatcctcacttatgctctcatgaacgagggggtc
acaggtttgaaggagctggccttcctgagagacctcgctgagcagaactccgtgaagtac
ggcgtcgatcgaacatttgaacgagagcgctcctccgctgcatcgccgcctggatcctcc
ggagcttcagtgatgccggtggtaaagggcagcatgatggtgctgaaccagctgagcaac
ctggagacgaccgtgggccgtttctacatcaatctgcccaatcgcatgatcgacctggcc
tgcttcagcctgccctactctgaccccatgggagacgggtttatcatgactgtgagtcgg
ccatgttactttggtaacatgctgctgggtgtagtcggggtggatgtgaacctggcctac
atcctggaggacgtcacctactatcaagactcgctggcctcatacaccttcctcattgac
aacaaaggttacaccttgatgcacccgtcgctgacccgaccctacctgatgacggagccg
cccctgcacacagacatcatccactacgagaatatcccaggattccctgctgtccgacag
aacattctcagcctccctttgggcagtcaggtcatcgctgtgccggttaactcctccctg
tcctggcacaccaaccggctcagggacaacagaaaagatgcgtacaacgtcagctatgcc
tggaaactggtccaggacacgtctttcatcctgtgcattgtttatgtgcagccagagatc
ccagtgaagcagctgaagaacctgaacacagctcccagctccaagctgctctaccatcgt
ttggatctgctgggtcagcccagctcctgcctgcacttcaagcagctcgccaccgttgaa
tcccccacagtgatgctgtcagctggaagtttctcctccccctatgagcacctcagccag
ccagaaacaaagcggatggtggagcactacaccgcctatctgagcgataacaccaggctc
attgccaacccaggcctcaagtcgtctgtcaggaacgaggttatggcgaccagtcacgtt
acggatgagtggatgacactaatggaaatgagtagcctcaactgctacattgtgcgccgt
tacatagcaacacccagcggggtgctccggatttacccaggatcgctgatggacaaagca
ttcgacccgacccgcagacaatggtaccagcatgctgtggctaaccctggcctcatcacc
ttcacaggcccgtacctggatgtgggcggggccggctacgtcgtcaccatcagccacact
attcatgcctccagctctcagatggctcctggttatgccgttgcagtgatgggtatagac
ttcacccttcgctacttctacaaggtcctgctggacctgctgcccatctgcaaccaggac
aaaggccacaagatcaggtgcttcataatggaggacagaggctacctggtcgctcatccc
actctcattgaccctaaaggtcatgctcctgcagaacagcagcacatcacacacaaggag
ccgcttgtggccaacgacatcctgaaccaccctaactttgtcaagaaaaacctctgtaac
agcttcagtgaccgcacagtgcagcgcttctacaagttcaacaccagcataatgggggac
ctcacaaacctcgtccacggcagccattgttccaagtatcgcctgaccagaatccccggc
accaacgcgtttgctgggatagtgaacgagacgtgcgactcgctggcgttctgcgcctgc
agcacggtggaccggctctgtctcaactgccacagaatggagcagaatgagtgcgagtgt
ccatgtgagtgccctctggaggtcaacgagtgcacaggcaacctcaccaatgctgagaac
aggaaccccagctgcgaggtgcatcaagaaccagtcagtctgaatgtgattgatcccagt
ctgcacgacaccctgccccagtgcatcaacacccgctgcagccagagatacaccagcagt
gattgtttcggcgtgttggactgtgagtggtgcatggtggacagcgatggtaagacccac
ctggacaagccgtactgcgctctgcagaaggagtgtttcggaggcatcgttggtgccaag
agtccatacgcagacagcctgggacttattgatgaggaggtagcatctttgaacatgatc
aagagcgcccccgtgggtccggtcgctgggggcatcatgggatgcatcatggtgctggtg
ttggccgtgtacgcgtacagacaccagatccacagacgctcacaccagcacatgtcgccg
ctggctgcacaggaaatgtctgtgagaatgtccaaccttgataatgagagggatgagcgg
gatgaagacagccacgaggacagaggaattatcagcaacaccagatttatagctgccgtg
atcgagagacacactcacactcctgaacggaggcggaggtactggggccgatccgggacg
gagagcgaccacggctacagcaccatgagtccacaggaggacagcgagaatccacctgga
aacaacgacccgctctcagcaggcgtcgacgtcagcaaccacgacgatgacctggacctg
gacacgccccctcagacggccgcgctgctgagccacaagttccacccgtacagacacacg
cacacgcaccaccacccgctgcacacgcacacacaccacctgcaggcggcggtgacggtg
cacagcgtggacgcagagtgctga
DBGET
integrated database retrieval system
