Kryptolebias marmoratus (mangrove rivulus): 108238452
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Entry
108238452 CDS
T05608
Symbol
syde2
Name
(RefSeq) rho GTPase-activating protein SYDE2
KO
K20655
Rho GTPase-activating protein SYDE
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
kmr04131
]
108238452 (syde2)
Membrane trafficking [BR:
kmr04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
108238452 (syde2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
Motif
Other DBs
NCBI-GeneID:
108238452
NCBI-ProteinID:
XP_017276050
LinkDB
All DBs
Position
LG24:complement(3177239..3215885)
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AA seq
1630 aa
AA seq
DB search
MADPLRRTLLAKLRGKKSKKGATLGGGGGFGSAAAANGSRGGKEKVVQTQRDADEALPVV
LLTGMDLTAERMSTYENCVEAALVRAGGTQEEPSCGGRGKDELLLGVPLLRDEPNAFRED
DGGHRGPRFAARIAAGSPYVQIRPFVSVPRQRSVGDSIGFGDSSCQVYRGAPKAAEGTEL
RARGVSHMAQTQENKANWTFDSGPTLETDSPSCAALVFPTCSAVSTEENVVIRNIESYDP
DCLGDTRETAGSPQSPAFFPTELQICDIKVTSLCATQGPHRHPLDSDDDDYYDNEILPFY
ETARPKTDVDRGEVEESGQNKGQVVDGNSAQETDRLRNQLQEAYYLLINAMNDMSLDFQQ
IRDDLAERQATSSCSSRSRDSLCSRLSVKNIDSDSWSSGGNHSSQQGSDTESLLLCLTGN
LEPKSRLTSKSMSNLSLTKRPTLLRSASDGAIRYQSRASAPVQTEVDDDKRASEAKKAEV
TEADGLSEPRVLHGAVSSEELLHDAGGEQLNESSGSVNSLTGSSDSNMEAAAHQGQEAKQ
EQTGGRTQAVSSANKAHGVTVNKMQEWMHKGRLLSSEMKQRIEGSSLPRGGGQTQTQDRA
SLQAHLRPGTQTCVRGGKSVKTKSSTIKAPRQQQPAFIENFQAPCANDREVSRSTNEPPS
WRPQLTTITVSKKRNWLQQSSQGRGQFIKDELQEVLGAEEEGSHVLHQLPPPPSPSPDHL
RHAGGAPPRPVRLQLPQVTVGPAKVSPHPRMVDPAEENDADDEGEIWYNPIPEDDEPRMS
HQASVRLLVPPRTEPQRRPSRGLDLAQGSRTLEGSSGPEGHVDSLSGGSGDAAHSAEAPH
LHRQMLTCKPQEEGGLSLSKPTDGLDLPSAVGFSPPSSPNPTKKSSSINWSFPDKIKSPR
TVRKISMKISRKLSVKGTQSSNGSSQLEPRAHSPRANGSGSEVVTQTLVSSGGGPAGRNV
ISRYHLDSSVSTQHSFSKKKSNGSSKSASKGGYLSDGDSPELLAKSGKHGSAEGKGGKGK
ETDGGGTSRLNGTELDIDAFRHYSFTEQPKCSQYISGLMSLHFYGAEDLKPPRVDSRDVY
CAIQVDSVNKARTALLTCRTSFLDMDHTFNIELENAQHLKLVVFSWEPTPKRNRVCCHGT
VVLPTLFRVTRTHQLAVKLEPRGLIYVKLNLMEQWQNSLDGGPDRDREPQVFGVEAWRVV
ERENTGLMVPLIISSCINEIEKRGCQVVGLYRLCGSAAVKKELREAFERDSHAVELCEGM
YPDINVITGVLKDYLRELPYPLINKPLYEAVLETMAMRPLRMGAAGCENDQADSEHTVSL
LENLPEVERMTLRRLLDHLKLVASYQEVNKMTCQNLAVCFGPVLLSQRQEASCHTNRVFI
DSEELASALHFKKHIEVLHYLLQLWPVVDPYEQSSSHPPAASVAPASSDLLSAPPPLRRR
KERPQVLNFSEVDMAGVLRPKPGRLDSPSNRYAGDWSGCGENYFPSEMLPPPSKEEADYD
DVPSEDTEAAEEVHDKQEETAEENQQETDPAEQEQPETEEVGRVEEEGEEEMKDNESDTS
NRHSLEEEDAEERRYNHILPPHTYQAYMKIQDLSPVLSNRVNLRDLQESIDTLIGNLERE
LNKNKLNVGY
NT seq
4893 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcctctgcggaggactctactagcgaaactccgggggaagaagtccaaaaaa
ggagcgacgctcggcggcggcggtggattcggatctgctgcggcggccaacgggagccga
ggaggtaaagaaaaagttgtgcaaacgcagcgggacgccgacgaggctctgccggtagtt
ttgctcacagggatggatctgacggctgagagaatgagtacgtacgagaactgcgtcgaa
gcggcgctggtgcgagcaggggggacccaggaggagccgagctgcgggggcaggggtaag
gacgagctcctcctgggggtccctcttctaagagatgagccaaatgcgtttagagaggac
gacgggggccaccgggggcccagattcgcagctagaatcgcggcggggagcccgtatgtg
cagataagacccttcgtgtcggtgccgcggcagcgcagcgtcggggactccatcgggttc
ggggacagttcctgtcaggtgtaccgaggggcccccaaagctgctgaggggacggagctc
agagccagaggagtgtcccacatggcacaaacacaggaaaacaaggccaactggactttt
gacagcgggccaactttggagacagattcgccaagttgcgcggcgctcgtgtttccaacc
tgttctgcagtaagcacggaggaaaatgttgttataagaaacattgagagctatgacccc
gactgtttaggggacactagagagacagcaggcagtccacaaagtccagcttttttcccc
acagagttacagatctgtgatattaaagtgacatctctgtgcgccacacaggggccacac
agacaccctttagacagtgacgacgatgattactatgataatgaaatcttgcctttctat
gaaacagctagaccaaaaactgatgttgacagaggggaggttgaagagtccggtcagaat
aaagggcaggtggttgacggtaatagcgcccaggaaacagaccggcttaggaaccagctg
caagaggcttactaccttcttatcaatgccatgaatgatatgagcctggatttccagcag
attagagatgacttagcagagcggcaggccacctcctcctgtagtagccgctcaagggac
agcctgtgctccaggttgtcggtcaaaaatatcgacagtgactcctggtcgtcaggaggc
aaccacagttctcagcagggatctgacaccgaatcgctgcttctctgcctcactggaaat
ctagagccaaagtcgaggctgaccagtaagagcatgagcaatctgtctttgaccaaaagg
cccaccttactgcgctccgctagtgatggagctatcaggtatcaaagcagagcctcagct
cctgttcagacagaagtcgatgatgataaacgagcttcagaggcaaaaaaagccgaagtc
acagaagcagacgggctgtctgaaccccgtgtgctgcacggcgccgtcagcagcgaggag
ctgctgcacgatgctggaggtgagcagctcaatgagagcagcggctcggtcaacagcctc
acgggttcctcagacagcaacatggaggcagcagcacatcagggtcaggaggccaagcag
gagcagacgggtggtcgaactcaggcggtcagctcagccaacaaagcccacggcgtcacc
gtcaacaagatgcaggagtggatgcacaagggtcgcttactgtcgtctgagatgaaacag
cgcatcgagggctcgtctctgccccgtggtggaggccagactcagactcaggaccgggcc
tctcttcaggctcacctcagaccagggacccagacatgtgttcgtggtggtaaatctgtc
aagaccaagtcgtctacgatcaaagcgccaagacagcagcagccagctttcattgagaat
tttcaagccccgtgtgctaatgaccgcgaggtgagcagatcgaccaatgagcctccgtca
tggaggccacagctcaccaccatcaccgtctccaagaagcgcaactggctgcagcagagc
tcccagggaaggggtcagttcatcaaggatgagctgcaggaggtgctaggagctgaggag
gaaggcagccatgttctccatcagctgccgcctccccccagtccttccccggaccacctg
agacatgcagggggagcgccgcctcggccagtccgcctgcagctcccacaggtaactgtt
ggtccggctaaggtgtctcctcaccctcggatggtggacccagctgaggagaatgatgca
gatgacgagggagagatttggtacaatccaatcccagaggacgatgaaccaaggatgtct
caccaagcctctgttcggctactcgtcccgcctcgaacggagccccagaggaggcccagc
aggggactggatttggctcagggcagcaggaccctggagggttccagcgggccggagggg
catgtggacagcctcagcggtggttcaggagacgctgcacattctgcagaggctccacat
ctgcacagacagatgctcacatgcaaacctcaagaggagggggggctctccttgagcaaa
ccaacagatggtcttgacctgccgagtgccgttggcttctcccctccatcaagcccgaac
cctaccaagaagagcagctccatcaactggtccttcccagacaagatcaagtccccacgt
actgtcagaaagatctccatgaagattagccgaaagctcagcgtgaaagggacccaaagc
agcaacggaagcagtcagctggagccaagggcccattctcctcgggccaatgggagtggg
tctgaggttgtcactcagactttagtctcatctgggggcggtccggcaggtcggaatgtg
atctcgcgctaccacctggacagcagcgtgtccacacagcacagcttcagtaagaagaaa
agtaacggcagctcaaagtccgctagtaagggtggctacctcagtgatggtgactctcca
gagctgctggctaaatctggaaagcacggctctgcagagggtaaaggtgggaaaggaaaa
gaaactgatggaggtggaacctccagactgaacggcacagagctggacattgatgctttc
cgtcattacagcttcacagagcagcccaagtgcagccagtacatctctggactgatgagt
ctccatttttatggtgctgaggacctcaaacctccccgtgttgactctcgagatgtctac
tgtgctatccaggtcgactctgttaacaaagcacgcacggctctcctcacctgccgaacc
tccttcctggatatggaccacaccttcaatatcgagctggagaacgcccagcacctgaag
ctggtggtgttcagctgggagcccactcccaaacgcaaccgcgtctgctgccacggcacg
gtggtgctgcccacgctcttcagggtgacacgtacccaccagctggctgtgaaactggag
ccccggggactgatctatgtgaagctgaacctgatggagcagtggcagaactcgctggac
ggcgggccagacagagaccgagagccgcaggtgtttggcgtggaggcgtggcgggtggtg
gagagggagaacacggggctgatggtgccgctgatcataagcagctgcatcaatgagatc
gagaagagaggctgccaggtggtgggtctctatcgtctgtgcggctctgcggcggtaaag
aaggagctacgtgaagcgtttgagagagacagccatgctgtggagctgtgcgaaggcatg
taccccgacatcaatgtcatcacaggagtgctgaaggactacctgcgtgagctgccctac
ccgctgatcaacaagccgctgtatgaagccgtgctggagaccatggccatgagacctctg
agaatgggcgccgcggggtgcgagaacgatcaggcagactcggagcacactgtcagtctg
ctggaaaacctgccagaggtggagaggatgactttgcggaggcttcttgaccacttgaag
cttgtggcgtcttatcaagaagtgaacaagatgacatgtcagaacctggcggtgtgtttc
ggcccggttctgctcagccagcgccaggaggcgtcctgccacaccaaccgcgtcttcatc
gactccgaggagctcgcgagcgccctgcacttcaaaaagcacatcgaggtcctgcactac
cttcttcagctgtggccagttgtggacccctatgagcagtcgtcctctcacccccctgca
gcctctgtggctccggcctcgtctgacctgctgtcagcccctcctcctctgagacggagg
aaggaacgcccccaggtcctgaacttcagtgaggtagatatggcgggcgtcctgaggccc
aaaccgggacgtttggacagccctagcaaccgctacgctggcgactggagcggctgtggt
gaaaattacttcccctctgaaatgctgccgcctcccagcaaagaggaagcggactatgat
gacgtgccctccgaggacacagaggcagcagaagaggtccacgacaagcaggaagagaca
gcagaggagaaccaacaggagacggatcctgctgagcaggagcaacctgaaacagaggag
gtggggagggtagaggaagagggtgaagaagaaatgaaagacaacgagagtgatacttca
aacagacactcattagaggaggaagatgccgaggagaggaggtataatcacatcctgcca
cctcacacttaccaggcctacatgaagatccaggacctcagccctgtgctgagcaacagg
gtgaacctgagagacctgcaggagagcatcgacacgctgatcggaaacctggagagggag
ctcaacaagaacaagctcaacgtcggctactga
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integrated database retrieval system
