Kryptolebias marmoratus (mangrove rivulus): 108238469
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Entry
108238469 CDS
T05608
Symbol
rexo1
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108238469 (rexo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
kmr03009
]
108238469 (rexo1)
Ribosome biogenesis [BR:
kmr03009
]
Eukaryotic type
Pre-60S particles
RNases
108238469 (rexo1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
SLBP_RNA_bind
Motif
Other DBs
NCBI-GeneID:
108238469
NCBI-ProteinID:
XP_017276074
UniProt:
A0A3Q3G4I2
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All DBs
Position
LG24:5296607..5307906
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AA seq
1247 aa
AA seq
DB search
MLRSTGFFRGIDCPFYADGSGGKSGCNRPYCHFRHSQQRRSSYGAPADVKRQKDVQFGQK
EQGYNPFNPEVVRPQEQQNGDPAASGDLSGALELVNKAIEEVRSEVEREKRKLSRIGDEP
YSPTESASLSSSDVTKSRAAGLHLAYDPGSYQITSGGYNLTPGCSKYTLDSDIKGHNSSS
MEYVPTLLKRPVSQTQLLKPSSPPPSPKYSNSTSFKYTVDNSRPSTDMEYDPLSNYSAGI
TAKSKRDESASVKTDYSKASTLSGTVLSDEGCGAALKKPPQPNLNTKKYTISDSDGESSG
TEYRPTSLSSLQQKKANIGSAKDAFRKDRTESMQGALTLKKREDVSEDSDIQESVKQKDI
PEKKKVADPASHGKSSKSEKVHKTEKEVCKSSSQKGSSSCISKDKGSVKNSNQDCAKKEN
KSHGKKDDSKNTAKVKASDKVQREGREEKRSDGKIKTAEKTKRDSSKQDKDAPESKKLKT
SDKEKEHSKHKDRQHKNGKLDSKKEKEVKKMSKHSSSSGKSSSANSKDKVKQNTSSSHET
KLGSKKQSLTLSHADLFGDESPEEAEPIAVDYDDDAEEVLVRKSADALKRGRLNKRKASE
RSPSSSEDDDDHSVESSKTSWDRADGAGIDFSRFQDDLDFDSDPMEECLRIFNESKDVKK
EDKGRQAKQPLRDSEEEKIPDSTLTTLFPGQKKRVSHFVAKNTDAPSKSVVRPYKRPTPQ
EMCYQRMQIAQQQAAQLSASQRSSPGVSGEKKRIAHRPNPQTPSSKTSPAHDKPATSQVL
SPSQSFQGVKSQTTAGILSKTSSTVLQTRVAHTPTMKSTSMKRPVIPSEFGAKVPTNIRQ
RYLNTFIDECVKFCASEEAAFHMALDEEKLVYERSSSKNIYLNVAVNTLKKLRGKSCSSP
SPSKRESGSAAKRKSLSHEEVLGGRLAATTSFTVNRSGKQQEEKLVGTVLFRKLKAYLMT
EEQLQEHGYPRLNPEASGKAVIYNQPEKKIISDPFTKICCRCGAEYKINVNGSCVRKEEC
SYHWGRLRRHKVAGGWETTYSCCSTTAGAPGCQIAKQHVQDARKESLDGFVSTFSKPLPP
DGNGGVFALDCEMCYTKQGLELTRVTVIDSEMRVIYDTFVKPESKVVDYNTRFSGVTEED
LENATITLRDVQAVLLSMFRAESILIGHSLESDLLALKLIHSSVVDTSVVFPHRLGLPYK
RALKNLMADYLKRIIQDNVEGHDSSEDASACMELMIWRIKEDAKVKR
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atgttgaggtccaccggcttcttccgagggattgactgtccgttttacgcggacggcagc
ggcggtaaaagcggctgtaaccgaccgtactgtcacttcaggcacagccagcagcgacgc
tcgtcttacggagctccggcggacgtcaagcggcagaaagacgtccagttcggacagaaa
gagcaaggttacaatcccttcaaccctgaagtagtgaggccgcaggagcagcagaatgga
gacccggctgcgtcaggagacctcagcggtgctttggagctcgtcaacaaggccatcgag
gaagtccgcagcgaggtggagagagagaagaggaagctctctcgcatcggggatgaaccg
tacagtcccactgagagcgccagcttgtcttcatccgatgttacaaaaagtagagcagca
ggcttgcacttggcctacgatcctgggagttatcagatcacatcaggaggatataatctc
actccgggctgcagcaaatacaccttggattcagacataaagggccacaacagtagctcc
atggaatatgttcctactttgctgaaaaggcctgtctctcagacacagctgctgaaacct
tcctctcctccacccagcccaaaatattcaaacagcacatccttcaaatacactgtagat
aattctaggccctccacagacatggagtatgaccccctgtccaactactctgctggcatc
acagcgaagagcaagagggacgagagtgcctctgtgaaaaccgattatagcaaagcctcc
acattatcagggactgttttatcagatgaggggtgtggagcagctttaaaaaagcccccg
cagcccaatctaaacacaaagaagtatactatctctgactccgacggggagagttctggg
acagagtaccgaccaacgtcacttagcagtctccagcaaaaaaaagccaacatcggatcg
gctaaggatgcttttaggaaagacaggactgaaagcatgcaaggcgcattaacgctgaag
aaaagagaggacgtgtcagaggactcagacattcaggaaagtgttaaacaaaaggacatc
cctgaaaagaagaaggtggcagatccagctagtcacgggaagagtagcaaatctgagaag
gtgcataaaactgagaaggaagtttgcaaatcatccagtcaaaagggcagcagcagctgt
attagtaaagacaaagggtcagtgaagaactcaaaccaagactgtgcgaagaaagagaac
aagagtcatgggaagaaagacgatagtaaaaacacagcaaaggttaaggcatcagataaa
gtccagagagaaggcagagaagaaaagagaagtgatggtaagatcaaaactgcggaaaaa
actaaaagagactccagtaaacaagataaagatgcaccagagagcaaaaaactcaaaaca
tcagacaaagaaaaagagcacagcaagcataaggaccgccaacacaaaaatggtaaactt
gacagtaaaaaggaaaaagaggtcaagaaaatgagtaaacacagttctagcagcggtaaa
agcagttcagccaacagtaaagacaaggtgaagcaaaacaccagctcgtcacacgaaacg
aagcttgggagtaaaaagcagagcctgactttgagccacgccgatctgtttggagacgag
agcccggaggaggccgagccgatcgcggtggattacgacgacgatgcggaggaagtcctg
gtgaggaaatcggccgacgcgttaaagaggggccgtctgaacaaaaggaaggcttcggag
cgctcgccgtcttcctctgaggatgacgatgaccacagtgtggagagcagcaagacgagt
tgggacagggctgacggcgctggaatcgacttttccaggtttcaggatgacctggacttt
gactcggatcccatggaggagtgtctgaggatcttcaacgaatccaaagacgtgaagaag
gaagacaagggaaggcaagcgaagcagcctttgagagattcagaggaggagaaaatccca
gacagcactttaaccactctcttccctggtcagaagaagagagtgtcccattttgttgcc
aaaaatactgatgcaccttcaaagtctgtggttcggccgtataagagacccacgcctcag
gagatgtgctatcagcgtatgcagatcgctcagcagcaagcggctcagctttctgcctcg
cagagatccagccccggcgtttctggagagaagaagaggatagctcaccggcctaacccg
cagacgccatcatctaagacaagtcctgcacacgacaaaccagctaccagtcaggtttta
tcccccagccagagctttcagggcgtcaagtcccaaaccaccgccgggattctgtccaag
acttcttctactgtcctgcagacgagggtggcacacacgcccacgatgaagagcacttcc
atgaagcgtccggtcatccccagtgagttcggggcaaaagttcccaccaacatccgccag
cgctacctcaacactttcatagacgaatgtgtcaagttttgtgcgtcggaagaagctgcc
ttccacatggccctggatgaggagaagctggtgtacgagcgcagcagcagcaaaaacatc
tacctcaacgtagccgtcaacacgctgaagaagctccgaggcaaaagctgctcgtctcca
tcgccttcaaagagagaatctgggtcagcagctaaaaggaagtccctgtcccacgaggaa
gtcctgggcggtcgacttgcagcgacaaccagcttcacagtcaacaggtcggggaaacag
caggaggagaaactcgttggaaccgttctgttcaggaagctgaaggcgtacctgatgaca
gaggagcagctccaggagcacggatacccccggctgaaccccgaggcctccgggaaggcc
gtcatttacaaccaaccagagaaaaagatcatctcagaccccttcaccaagatctgctgt
cgctgtggcgccgagtataagatcaacgtaaacggcagctgtgtgcgtaaagaggaatgt
agctatcactgggggcgtttacgccggcataaagtcgctggaggctgggagacgacttac
agctgctgctccacgactgcaggagctcccggctgtcaaatcgcaaagcaacacgttcag
gacgccagaaaagagtcgcttgatggtttcgtgtcgacgttcagcaaaccgcttccaccg
gacggaaacggcggcgtgttcgcgttggactgtgagatgtgttacacgaagcagggactg
gagctgaccagagtcaccgtcatcgactcggagatgagagtcatctacgacacgttcgtc
aagcccgagagcaaagtggtggactacaacacgcgattctcgggcgtgacggaggaggac
ctggagaacgccaccatcactctgagagacgtccaggcggtgctgctcagcatgttcagg
gccgagtccatcctcatcggacacagtctggagagcgacctcctcgctctgaagctcatc
cacagttcagtcgtagacacatccgtggtgtttcctcaccgcctcggtttgccctacaaa
cgtgccttgaagaacctgatggccgattacctcaaacgcatcatccaggacaacgtggag
ggccacgattcgagcgaagacgcgtccgcctgcatggagctgatgatctggaggattaag
gaggatgcaaaggtcaaaagatga
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