Kryptolebias marmoratus (mangrove rivulus): 108238542
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Entry
108238542 CDS
T05608
Symbol
stxbp5l
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
kmr04131
]
108238542 (stxbp5l)
Membrane trafficking [BR:
kmr04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
108238542 (stxbp5l)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
108238542 (stxbp5l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
EIF3I
Lgl_C
Beta-prop_WDR19_1st
Synaptobrevin
Beta-prop_NUP159_NUP214
PEP5_VPS11_N
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
108238542
NCBI-ProteinID:
XP_017276170
UniProt:
A0A3Q3AWX1
LinkDB
All DBs
Position
LG6:complement(6348288..6478594)
Genome browser
AA seq
1269 aa
AA seq
DB search
MKKFRKVLDGLTTSSPGGTIGSPSCGSAAGTPTSAPTPREIDVQETLASENFQLCKTVRH
GFPYQPTALAFDPVQKILAIGSRSGGVRILGRPGVDCFCQHESGAAVLQLQFLINEGALV
TACADDTLHLWNLRQRRPAVLHSLKFNRERITFCHLPFQSKWLYVGTERGNTHIVNIESF
ILSGYVIMWNKAIELSTKTHPGPVVHLSDSPKDEGKLLIGFEGGTIVQWDLRAKKADFRI
YYDEAIHSASWHHEGKQFMCSHSDGSLTLWNLRNTTKPFQITFPHGKIQKDGRKESCKPI
LKVEYKTSRNSSEPFVIFSGGLSYDKAGRRPALTIMHGKAMTVLEMDYPIVEFMALCETP
YNNEVQEPYAVVVLLEKDLIVVDLTQSTFPVFENPYSMDIHESPVTCTAYFADCPPDIIP
ILYSIGAKHKKTGYSHKEWPIAGGTWTLGSHTYPEIIITGHADGSIKFWDASAFTLQMLY
KLKTSKVFEKPKPGEGRAADLVEEDPFAVQMVSWCPQSRIFCVVGISAHIILYRFSKYDA
NTQIVALEVRLQCDAEDVITPSENENNPCFSEPGSHSPQPHHQYPVSPGSRTPEGAKDSV
PCLKVKDRVVRVPPGYQSDLVIQLLWVDGEPPQQITSLDINSAYGLLAFGNCNGLAVVDY
LQKTVILCMSTLDLYGATDPYQRLTRSPRRNRQSTSEHCMRGLSNLYSDSKKRIRTSYQS
LTELTDNQQSIDMERSKSPTSVHYPTSLHNDPRVLPEPVASLRASHCSPVFYLLDNVKGP
GRKLSLPTDLKTDLDHVNGHCTSPTSQPCSAGKPRVPMGPEGPRLTRRGPGRPPFRKAQS
AACMEISLPVSHTEGHASRRAMLQQLHGVTMYSHDEHHTTTSYCWNERESRENSFSRSRS
SSVSSIDRDTKEAITTLQFGESYGRKSDALPTPCLWVGTSLGVVLLIPLSIPIDQEERME
EPVAIGPSGAVQMLKGSVLRFAFLDCMGVLIQSPYEVWRDLNAPEDPDRPRRRKLVHFSP
SSSQDAYGEGHLAVVCSERQAKVFIMPLQTCLFVHNITESSFVLRADVVSVCNSVCLACF
CANGHVMTLSLPSLRPLMDVNYLPLTDMRIARTFCFTNGGQALYLSSPTEIQRITYSQEM
CDNLQEMLGELFTPIETPEAQNRGFLKGFFGGNAHTFDREELFGEAAAGKASRSLAQHIP
GQGGVEGMKVAAGGAVGELARARIALDERGQRLGELEERTALMMTSAETFSKHAHELMLK
CKDKKWYQF
NT seq
3810 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagttccggaaggtgttggacggcttgaccacatcctctcccggagggaccatc
gggtccccgtcgtgcggcagcgcggccgggactcccacctcggcgccaactcccagggaa
atcgacgtccaggagacgcttgcgtcggaaaactttcagttgtgtaagacggttcgtcat
ggtttcccttaccagccgactgctttggcctttgaccctgtgcagaagatcctcgccatc
ggttcaagatcaggtggtgtaagaatactgggacggccaggggtggactgcttctgtcag
catgaaagcggggcagctgtacttcaactgcagttcctcatcaatgagggggcgctggtc
acagcctgtgcagatgacacgctacacttgtggaacctacgccagaggcgaccagctgtc
ctgcattcactcaaattcaacagagagaggatcacattttgccacctgccctttcagagt
aaatggctctatgtggggacggagcgtgggaacacacacattgtcaacattgagtctttt
attttgtctggatatgtcatcatgtggaacaaggccatagaactatcaactaaaactcac
ccaggacctgtagttcatctgagtgacagcccaaaggatgaaggcaagttgcttataggg
tttgaaggtgggaccattgtacagtgggaccttcgggccaaaaaagcagacttcagaatc
tactatgatgaggccatccactcagccagctggcaccatgaagggaaacagttcatgtgt
agtcactcagatggaagcttgacgttatggaatctcagaaatactaccaagccattccag
atcaccttccctcatggaaagattcagaaggatgggaggaaggagtcatgtaaacccatt
ctcaaagttgaatacaagacctcaagaaacagcagtgagccttttgttatcttctctggt
ggcctttcatacgacaaggcaggacgacggccagcattgaccatcatgcatggcaaagct
atgaccgttctagagatggactatcctattgtagagttcatggcgctctgtgagactcct
tataataatgaggttcaggagccgtatgcagtggtagtgctgttggagaaggacttaatt
gtagtggatctgacacagagcaccttccctgtgtttgagaacccttactccatggacatc
cacgagtctccagttacctgcacagcttattttgcagattgtccaccagacattataccc
attctctactctataggcgcaaaacacaagaagacaggctacagtcataaggagtggcca
attgctggaggaacatggacattaggctcccacacctacccagagatcatcatcacagga
catgctgacggatcaataaaattttgggatgcatctgcattcacactgcagatgttatac
aagctgaagacctccaaagtctttgagaagccaaagcctggagagggtcgggctgcggac
ttggtggaagaagacccatttgctgttcagatggtcagctggtgccctcagagtcggatc
ttctgtgtggtcggcatatcagctcacatcatcctgtatcgcttcagcaaatatgatgcc
aacactcagatagtggcactagaagtgcgcctgcaatgtgatgctgaggatgtcatcact
ccgtcagagaatgaaaataatccctgcttctcagagccaggctcacactcaccccaacca
caccaccagtacccagtgagcccaggcagcagaacgccggagggggccaaagacagcgtc
ccctgcctcaaggtgaaagaccgagtggtccgagttcctcctggctaccagtcagacctg
gtcatccagctgctgtgggttgatggagaaccaccccaacagatcaccagcctagatatc
aattctgcatatggcctcttggcgtttgggaactgcaacggtctagcagtggtggactac
ttgcaaaaaacggtcatattgtgcatgtcgacactggatttgtatggagccaccgacccc
taccagcgccttacccgttcccctcgtaggaacagacagtccacctcagagcattgcatg
cgcggcctgtctaacctttattcagattcaaagaaaaggatccgtacatcctatcagagc
cttactgaactcactgacaaccagcagtccatcgacatggagagaagcaaatcaccaacc
tcagttcattacccaacctcccttcacaatgacccacgcgtcctgccagagcctgtggcc
agtctgagagccagccactgcagtccagtcttttacttgctggacaatgtaaagggaccc
ggcagaaagttaagtctgcccacagatcttaagactgatcttgatcatgtcaatggacat
tgcactagccccacctcccagccctgctcggcggggaagcctcgcgttccaatgggtcct
gaggggccacggcttacccgcagaggccctggccgaccacccttccgcaaggcccagtct
gctgcttgcatggagatctctttgcctgtgtcccacactgaagggcatgcatccaggagg
gcaatgcttcagcagttacatggagtcactatgtactcccacgacgagcaccacaccacc
acctcctactgctggaatgagagagagagtcgtgaaaactccttcagccgctcccgcagc
tctagtgtgtctagcatagaccgggataccaaagaggccatcaccacactgcagtttgga
gagtcatatggacgcaaaagcgatgccctgcccacaccatgtctgtgggtaggcactagc
ttaggcgtggtcctgctcatcccactgtctatccctattgaccaggaggaaaggatggag
gagcctgtcgccattggccctagtggtgcagtccagatgctgaagggttctgtgttacgc
tttgctttcttggactgtatgggagtcctcattcagagcccatatgaggtttggcgggac
ctaaacgcccctgaggaccctgatcgaccacggaggcgtaaactagtccacttttcaccg
tcatcctcccaggacgcctacggagagggacatttggctgtggtgtgctccgagaggcag
gccaaagtcttcataatgcccttgcagacttgcctgtttgtccacaacatcacagagtcg
tcctttgtactgcgagccgacgtggtatctgtgtgtaacagtgtgtgcctggcctgcttc
tgtgccaacggacatgtcatgactctcagtttgcccagtttaagaccgctgatggatgtc
aattacttgcctctgacagacatgcgcattgctagaacattttgtttcaccaatgggggg
caggcgctttatctcagttcccccacggagattcagagaattacatacagccaggagatg
tgtgacaacctccaggaaatgctgggagagctcttcactccaatagaaacaccagaagcc
cagaaccgaggatttttaaaaggattctttggaggaaatgcccatacatttgacagagaa
gagctttttggtgaggccgcagctgggaaggcttcccgcagtctggcgcagcacatcccc
ggtcaaggaggggtggagggcatgaaagtggcagcaggcggagcggtgggtgagttggct
cgagctcgcatagctctggatgagagaggccaaaggctgggtgagctggaggagcgaact
gccctgatgatgaccagcgcagaaaccttctccaaacacgctcatgagctcatgctgaaa
tgcaaagacaagaaatggtaccagttctaa
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integrated database retrieval system
