Kryptolebias marmoratus (mangrove rivulus): 108238627
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Entry
108238627 CDS
T05608
Symbol
acin1a
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03013
Nucleocytoplasmic transport
kmr03015
mRNA surveillance pathway
kmr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108238627 (acin1a)
09122 Translation
03013 Nucleocytoplasmic transport
108238627 (acin1a)
03015 mRNA surveillance pathway
108238627 (acin1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmr03019
]
108238627 (acin1a)
03041 Spliceosome [BR:
kmr03041
]
108238627 (acin1a)
Messenger RNA biogenesis [BR:
kmr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
108238627 (acin1a)
Spliceosome [BR:
kmr03041
]
Complex C
Other components
EJC/TREX
108238627 (acin1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
108238627
NCBI-ProteinID:
XP_017276325
UniProt:
A0A3Q3BD87
LinkDB
All DBs
Position
LG20:18079175..18094826
Genome browser
AA seq
1713 aa
AA seq
DB search
MADLEDVTLDGRPLQSLRVADLKAALEERGLSKSGQKNALVKRLKGALMLENLQRTSTPH
IGLQPNSQIGEEMSQNSFIKQYLAQQQELLRQRLEREAREAYETNDQQDHRDVNNSTSCP
PPAQDVTPPVQHKPPGPSVGEGLFGSVNAGQENRNQEADVSSAPASASVAMRGPGGEQRS
ERGSASSEVAGESDDEDSEGGGGDDDDDWGSSASRRNLREPPRVPTARERSGAPRQPQQQ
HIPSLLSPQLRQPTPPPSPPPELSFPLPDTPKQSPPSPPAAQARHSPSSSSSGSSSSGSR
SSSPEPQRSGHAERKPGPLTLLARKMESEGAFSGAGWHRTDGEGDRQDGSSPSAMLFPGR
GAPDGLVSAVPHTANTASHIPFPMIPGSHQGVTHSVPLSVSVLKATAAEERDREREAEME
RERALELERQEKLRQLEQERAAEEERERALALEREEQERALEREMFERQQALEREEREKA
LQRERELALEKERQEREMALAKEREERKRAIELERQRELERQRALEEERLQREREEKEKQ
EREEMERAMELERAKALELQRLEREKALEQERLERERALEAERREKERIEREKALEQERL
EKERIEREKALEQERLEKERIEREKALEQERLEKERIERERALEQERLERERALEAERRE
KERIEREKALEQERLEKERIEREKALEQERLEKERALEQERIEREKALELEKREKERIER
EKALEQERLEKERREREEKEKAEREAALERERMEKEKAEKERKEREKALEQEKLERAKVL
EKERALKQEKERALEQERLEKEKAKQKEEEEREKALKEEKLKMAEKDRGDHLSPSKSGHE
VYVSPQPTSSLLSEGVAQTSSTEAGQEDVHAPVSQTKAQAGDSDATPLSPHLSFKKFRFL
RDSPIQTKSSSTSLVIKRPRTFSDSPQPQVSPVISPTSVGERRSSAKQGEPPIGRNQEVG
AATVGSAEAEPQKTAEKVAQDPSPKEEGAKHLALEKKNQVPSPQTTKESIKSAKEREESK
ASPSPVDASEQRGRDARKGEKRARQRPSSNDSSSSESDSGSSSSRSSGSSTSSQDKTSSS
SRGRKEVKCKGESPSLHMETAEAVKDKKVPVERSNTADEVHTTKLVTEGSTRGEPLRKRK
HSEGEEERENQRQVKETVMADPEKLSGTSEEVPKVFSARKISLGSSKSSPGTGSGEAEQE
SVPVAGRKRRWGSSTAVTAKKPSISITTDSLKSLIPDIKPPLGQEAVVELHPEEAVVSGA
DDEDQESPEQNLQIRRTVTQVVHAEENGQQEAKRSRCEEFEEEDSQLEPERIKVHEEQMD
TSIPGALETQSPTQTSQDVEISTVMPSETLIRRSISQQKTGVSITIDDPVRTSRQPSPPR
GKVSNIVHVCNLVRPFTLGQLKELLSRTGTLVEDGFWIDKIKSHCYVTYSCIEEAVATQA
ALHGVKWPQSNPKVLRVDFCEQDELDFHKGLIVADKPGEEEAGPASGRGRTSVLPSLLPE
RDLWAEREREMERRERARAEREWDRDKVKEFGKPGEEKDGGPRRSRSRERRRKERGKSKE
KKTEKKPEDPPAKLLDDLFRKTKAAPCIYWLPLTEEQSLQREADRAERSKQREKQRKERE
EEEAKKREEERKERVKAAGATTGDRSEGEKDKDRDRERDRDKGRDKDRDRNRDRDRERER
ERENDKRRDGYRKPGGSSARRSRSRSDPRERRR
NT seq
5142 nt
NT seq
+upstream
nt +downstream
nt
atggcggacctcgaagacgttacgctggacgggagaccgctccagtccctccgtgtagcc
gacttaaaagcagctctagaagagagaggactgtcgaaaagcgggcagaaaaatgctctc
gtcaaaagactcaagggggctctcatgctggagaatttgcagaggacctccactcctcat
attggactgcagccaaactcccagattggggaggaaatgagccagaacagttttattaag
cagtatctggctcagcaacaggagctcctgaggcagcgtctggagagagaggctcgggaa
gcctatgaaacaaacgatcaacaggaccacagagacgttaacaacagtacatcttgccct
cctcctgctcaggatgtcacaccacctgtgcagcacaagccgcctggcccttctgttgga
gaggggttgtttggttctgtgaatgcaggacaagaaaacagaaatcaggaggctgacgtg
tccagcgcacctgcttcagcctccgtggccatgcggggtcctggcggtgagcagcggtca
gagcgaggttcagcttccagcgaagttgcaggcgagagtgatgatgaagatagcgagggt
ggtggtggcgatgatgatgacgactgggggagcagcgcttcaaggaggaacctcagagag
ccgcccagagttcccacagcaagggagaggtctggtgcaccacgtcaaccccaacagcaa
cacatcccttcccttttgtcgcctcagctccgccagccaacgccgcctccatccccacct
ccagagttatcgttccccttacctgacacccctaaacagagtccacctagtcctcctgct
gcccaagccaggcactcacccagctcctccagctctggttcctccagcagcggcagtcgc
agtagcagtccagagcctcaaaggagtggccatgccgagcgtaagcctggtccgctgacc
cttctggctcgcaaaatggagtcagagggggctttctccggagcaggttggcaccgcaca
gacggtgaaggtgataggcaggatggcagctcaccttcagccatgttgtttccaggcagg
ggtgctccagacggtctggtttccgctgtccctcacacagccaacactgccagccatata
ccatttcccatgattcctggctcccaccagggtgtcacacattcggtccctctttctgtg
agtgtgcttaaggccactgcagcagaggaaagggaccgagagagggaggctgagatggaa
agagaacgagcacttgaactggaaaggcaagagaagctgagacagcttgaacaagagcga
gcagccgaggaagagcgggagcgagccctcgcactagagcgagaagaacaggagagagct
ctggaaagggagatgtttgagcgccagcaggccttggaaagagaagaaagagagaaggca
ttacagcgagagcgagaacttgctctagaaaaagaaagacaggagagggaaatggctttg
gctaaagagagagaggagcgcaagagagccatagagctggagagacaaagggagctcgaa
agacagagagccctggaggaagagcgcctgcagagagaaagagaagagaaggaaaagcag
gaacgagaggaaatggagagggcaatggagctagaaagagccaaggctttggagctacaa
cggctagagagagaaaaggctcttgagcaagagaggttggagagggaacgagctctggag
gctgagagaagggagaaggaaagaatcgagagagaaaaagccctggaacaggaaaggctg
gaaaaggaacgaatcgagcgagaaaaggccctagaacaggaaagactggaaaaggaacgc
attgagagagaaaaggctcttgagcaggagaggctggaaaaggaaagaattgagagagaa
agggctcttgaacaggagaggttggaaagagagcgagctctggaggctgagcgaagggag
aaggaaagaatcgagagagaaaaggctcttgaacaggagaggttggaaaaggaaaggatc
gagagggagaaagccctggaacaagagagactagaaaaagagagggctttggaacaagag
aggattgagagagaaaaggccttggagctcgagaagagggaaaaagagagaattgagagg
gagaaagcactggagcaagagagactagagaaggaaagacgagagagagaggaaaaggag
aaggcagagagagaggcagctctggaacgagagaggatggagaaagaaaaagctgagaag
gagaggaaagaaagagaaaaggctttagagcaggagaagcttgaaagagcaaaagtactg
gagaaggagagagctttgaagcaagaaaaagaaagggctcttgaacaggaaagactggag
aaggagaaagcaaagcagaaagaagaagaggaacgagaaaaggcactgaaagaggagaag
ttaaagatggctgaaaaggacaggggggatcatctttctccatccaaaagtggccatgaa
gtttatgtctctccccagccaacgtcttctcttctgtccgaaggagtggctcaaacatca
tcaacagaggcaggacaagaagatgtccatgctccagtgtctcagactaaagcccaggca
ggagactctgatgcaacacccctgtctcctcacttgtcattcaagaagttccggttttta
agggactcccccattcagaccaagtcctcatccacttctttggttattaagcgacctcgt
actttctctgatagcccccagcctcaggtctcacctgtcatctcacccaccagcgttggg
gaacgacgatcctctgctaagcagggagaaccaccgattggaagaaaccaggaggttggt
gctgcgacggtgggatctgcagaggccgagcctcagaagaccgctgaaaaagttgcacag
gacccaagtccgaaagaagaaggagcaaaacaccttgctttggagaagaaaaatcaggtg
ccctcgccccagacgacgaaggagtccatcaaaagtgcaaaagaacgggaagaaagcaag
gcttctccgagcccagtggatgcttcagaacagagaggaagagatgcaagaaagggagag
aaacgagcgcgacaaaggccatcgtcaaatgattcatcttcatccgaatcagattctggg
tcctcgtcatctcgatcgtctggctcatccacatcttctcaagataaaacatcttcctcc
tctagaggcagaaaggaggtgaaatgtaaaggagaatccccatcactgcacatggagaca
gctgaggctgtaaaggacaagaaggtgcctgtagagaggagtaacactgctgatgaggtt
cacactacgaaactggtcacagagggatcaaccagaggagagccactcaggaagagaaag
cacagcgagggagaagaggaaagggaaaatcaaaggcaggtgaaagagaccgtcatggct
gatccagagaagctttcagggaccagtgaggaggttccaaaggttttctcagcacggaag
atctctcttggaagcagtaaatcatctcccggcaccggcagtggagaggctgagcaggag
tctgtgcccgttgctggtcggaagagaagatggggctccagcacagctgtcactgccaag
aaaccctccatcagcatcaccaccgattcactcaagtctctgattccggacatcaagccg
cctctaggtcaggaggcagtagtggagctacaccctgaggaagctgtcgtatctggggcc
gacgatgaagaccaggagagtccagagcagaacctgcagatccgacgcacggtcacacag
gtggtgcatgctgaggagaacggacagcaagaggcaaagaggagcaggtgtgaggagttt
gaggaggaggattcacagttagagccagaaagaataaaggtccatgaagagcagatggat
acttccatccccggagctttggaaacccagtcgccaactcaaacaagccaagatgttgaa
attagcactgtgatgcccagcgaaaccctcatccgccgctccatcagccagcagaaaacg
ggtgtttccatcaccatcgacgaccccgttcgtacgagccggcagccttcgccacctcga
ggcaaagtctccaatatcgttcacgtctgcaacctggtgaggccgttcacactcggacag
ctgaaggagctgctcagcagaactggcactctggtggaggacggcttctggatcgataaa
atcaagtcccattgttatgtcacttactcttgtatagaggaggcggtggctacacaagct
gctcttcacggagttaaatggcctcaaagcaacccaaaagtccttcgggtggacttttgt
gagcaggatgagttggatttccacaaaggcttgatcgtagcggacaaacccggagaagaa
gaagcggggcccgcctctggacgtggacggacgtctgtgctgccctccctcctccccgag
agagacctgtgggccgagcgcgagcgcgagatggagcggagagagcgggcccgagcagag
cgggagtgggatcgagacaaggtcaaagagttcgggaaacccggggaggagaaggacgga
ggcccccggaggtcgcgctccagagagagacggcgtaaggagagggggaagagcaaggag
aagaagacggaaaagaaacccgaagatcccccagccaaactgcttgatgacttgttccgc
aagactaaagcagctccttgcatttactggcttccacttacggaggaacagagtcttcag
cgggaagctgacagagcagaaaggagcaaacagcgtgagaagcagaggaaagaacgggaa
gaagaggaggccaaaaaaagggaagaggagcgtaaggagagggtgaaagctgcgggcgcc
acgacgggagaccgaagtgagggtgagaaggacaaggaccgagacagagagagggacaga
gacaaaggtagagacaaagaccgggacaggaacagagatcgagacagggagagggaaagg
gagagggagaacgacaaacgcagggatggttaccgtaaaccaggaggcagctcggctcgc
cgctcgcgcagccgaagcgatccgagagagaggaggcgctga
DBGET
integrated database retrieval system
