Kryptolebias marmoratus (mangrove rivulus): 108238831
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Entry
108238831 CDS
T05608
Symbol
hspd1
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108238831 (hspd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmr03019
]
108238831 (hspd1)
03110 Chaperones and folding catalysts [BR:
kmr03110
]
108238831 (hspd1)
03029 Mitochondrial biogenesis [BR:
kmr03029
]
108238831 (hspd1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
kmr04147
]
108238831 (hspd1)
Enzymes [BR:
kmr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
108238831 (hspd1)
Messenger RNA biogenesis [BR:
kmr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
108238831 (hspd1)
Chaperones and folding catalysts [BR:
kmr03110
]
Heat shock proteins
HSP60 / Chaperonin
108238831 (hspd1)
Mitochondrial biogenesis [BR:
kmr03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
108238831 (hspd1)
Exosome [BR:
kmr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108238831 (hspd1)
Exosomal proteins of other body fluids (saliva and urine)
108238831 (hspd1)
Exosomal proteins of breast cancer cells
108238831 (hspd1)
Exosomal proteins of colorectal cancer cells
108238831 (hspd1)
Exosomal proteins of bladder cancer cells
108238831 (hspd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
108238831
NCBI-ProteinID:
NP_001316302
UniProt:
G4W8Y6
LinkDB
All DBs
Position
LG6:21085325..21091448
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AA seq
575 aa
AA seq
DB search
MFRLPSIMKQVRPVSRALAPHLTRAYAKDVKFGADARALMLQGVDLLADAVAVTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKSIDLKDRYKNIGAKLVQDVANNTNEEAGDGTTTATVLA
RAIAKEGFDNISKGANPVEIRRGVMMAVENVIGELKKLSKPVTTPEEIAQVATISANGDE
EIGNIISNAMKKVGRKGVITVKDGKTLQDELEIIEGMKFDRGYISPYFINTAKGQKCEFQ
DAYLLLSEKKISSVQSIVPALEIANQHRKPLVIVAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKNQLIDMAVATGGTVFGDEALGLALEDIQAHDSGKVGEVQITKDDTLLLKG
GGSPADVEKRAAEIAEQLDNTTSDYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVLGGGCALLRCIPSLDKIKTANSDQKIGVDIIRRALRIPAMTIA
KNAGVEGSLVVEKILQGPSEMGYDAMQGEFVNMVEKGIIDPTKVVRTALLDAAGVASLLS
TAEAVVTEIPKEEKEMPAGMGGMGGMGGMGGGMGF
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgtttacccagcatcatgaagcaggtgaggcccgtgagtcgggcgctggcccct
cacctcacacgagcctacgctaaggatgtgaagttcggggctgacgctcgggccctcatg
ctgcagggggtggacctgttggccgacgccgtggccgtcactatgggcccgaagggtcgc
acagtgatcattgagcagagctggggcagccccaaggtcacgaaagacggcgtgacggtg
gccaaaagcatcgacctgaaggaccggtacaagaacatcggagccaagctggtgcaggat
gttgccaacaacaccaacgaggaagccggtgacggcacaaccaccgccacagtgctggct
cgcgccatcgccaaggaaggcttcgacaacatcagcaaaggggccaaccctgtcgagatc
cgccgcggtgtcatgatggccgtggaaaacgtcatcggggagctgaagaagctgtcgaag
cctgtcacgaccccagaggagatcgcgcaggtcgctacaatctcagccaacggagacgag
gagatcggcaacatcatatccaacgccatgaagaaagttggccgcaaaggagtcatcaca
gtcaaggatgggaagaccctgcaagacgagctggagatcatcgaaggcatgaagtttgac
cgaggttacatctcgccttacttcatcaacacagctaaaggtcagaagtgtgagttccag
gatgcgtacctgttgctcagcgagaagaagatctccagcgttcagagcatcgtgccggcc
ctagagatcgccaaccagcaccgcaaaccgctggttattgtagcggaggacgtggatgga
gaagccctgagcaccctggttcttaacaggttgaaagttggtcttcaggtggtcgctgtc
aaggctccaggcttcggtgacaacaggaagaatcagctgatagacatggccgtcgccacc
gggggcacggtgttcggcgacgaagccctgggcctggctcttgaggacattcaggctcat
gactctggcaaagtgggcgaggtgcagatcaccaaagacgacacgctgctgctgaagggc
ggcggcagccccgccgacgtggagaagcgggcggccgagatcgcagagcagctggacaac
accaccagcgactacgagaaggagaaactcaacgagaggctggccaagctgtcggacggc
gtggccgtgctgaaggtgggaggaacaagcgatgtggaggtgaacgagaagaaggaccgc
gtgacagacgctctgaacgccacgcgagcggctgtggaggagggtattgtacttggcggg
gggtgcgctctgctgcgctgcatcccctcgcttgacaagatcaaaaccgccaacagtgac
cagaaaatcggcgtggacatcatcagacgggcactccgcattcccgccatgaccattgcc
aagaatgccggcgtggagggttccctggtagtggagaagatcctgcaggggccgtcggaa
atgggctacgacgccatgcagggggagttcgtcaacatggtggagaagggcatcatcgac
cccaccaaggtggtgaggacggcgctgctggacgccgcaggggtcgcgtctttgctctcc
accgccgaggccgtggtcacagagatacccaaggaggagaaggagatgccagcagggatg
ggtggcatgggaggaatgggcggcatggggggcggcatgggtttctga
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