Kryptolebias marmoratus (mangrove rivulus): 108238941
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Entry
108238941 CDS
T05608
Symbol
gabra1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-1 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04080
Neuroactive ligand-receptor interaction
kmr04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108238941 (gabra1)
04082 Neuroactive ligand signaling
108238941 (gabra1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
kmr04040
]
108238941 (gabra1)
Ion channels [BR:
kmr04040
]
Ligand-gated channels
GABA-A
108238941 (gabra1)
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
108238941
NCBI-ProteinID:
XP_017276803
UniProt:
A0A3Q3AET4
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Position
LG13:7192915..7224848
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AA seq
461 aa
AA seq
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MCGRSRAASLHLWACLLVTSSVLGGKSSGQNSMTDELKDNTTVFTKILDSLLDGYDNRLR
PGLGERVTEVKTDIFVTSIGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMAVLRLNNLMA
SKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEEGTLLYTMRLTVRAECPMHLEDFPMDAH
ACPLKFGSYAYTRAEVVYVWTRGAAESVVVAEDGSRLNQYDLMGQSVDSGVVQSSTGEYV
VMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSI
SARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVPEKQKKKK
ESLLKKNNTTAYPTATATPFAPNPARNPGLATIAKSAPPPPDEPKEEPKPKPPEAKKTFN
SVSKIDRIARIAFPLLFGTFNLVYWATYLNKKPKLQGINPI
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggacggagcagggcggcctctctgcatctgtgggcttgtttgcttgtcaccagt
agcgtactgggtgggaaaagctctgggcaaaacagcatgacagatgaactgaaagataac
actacagtgttcacaaagatcttagacagccttctggatggctatgacaatcgcctcagg
ccaggactgggagagcgtgtaactgaagtcaagactgacatttttgtgactagtatcgga
ccagtttcggaccatgacatggagtacaccattgatgtgttcttcagacagagctggaag
gatgaaagactaaagttcaagggcccaatggccgtgctgcgtctcaacaacctgatggcc
agcaagatctggacccctgacacgttcttccacaatggcaagaagtcagtggcccacaac
atgaccatgccaaataagctgctgcggattacagaggaaggcacactgctttataccatg
aggctcacagtaagagctgaatgtcccatgcatctagaagatttccccatggatgctcat
gcttgtccactgaagtttggcagctatgcttatactagagcagaggtggtgtacgtgtgg
accagaggagcagctgagtctgtggtggtggcagaggatggctctaggttaaatcagtat
gatctgatgggacagagtgtggattctggtgtggttcagtccagcacaggagagtatgtt
gtgatgacaacccacttccacctgaagaggaaaattggttactttgtgatccagacatat
ctgccctgcatcatgacagtcatcctctcccaagtgtctttctggctcaacagagagtcc
gttcctgccagaactgtctttggagtgaccactgtcctgacgatgactactctgagtatc
agtgccaggaactctctccctaaagtggcctacgccacagctatggactggttcattgct
gtctgctatgcctttgtcttctcggccctcattgaatttgctacagtcaactacttcacc
aagaggggttatgcctgggatggaaaaagtgtagtgcccgagaagcaaaagaagaagaag
gagtctctcctcaagaagaacaacactacagcctatccaactgccactgctacacccttc
gcccctaatcctgccaggaatcccggattggccacaatcgcaaaaagtgcccctcctccc
ccagatgagcccaaggaggagccaaaacccaaacccccagaggccaagaagacctttaac
agtgtgagcaagattgacaggattgccagaatagccttccctctgctctttggaaccttt
aacttggtctactgggcaacctacttgaataagaagcccaagttgcaagggatcaatcca
atctaa
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