Kryptolebias marmoratus (mangrove rivulus): 108238942
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Entry
108238942 CDS
T05608
Name
(RefSeq) F-box only protein 40-like isoform X2
KO
K10315
F-box protein 40
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
kmr04121
]
108238942
Ubiquitin system [BR:
kmr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
108238942
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box_4
zf-TRAF_2
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
108238942
NCBI-ProteinID:
XP_017276811
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All DBs
Position
LG13:9299007..9305613
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AA seq
714 aa
AA seq
DB search
MSHRSRASRTQQQQQHLHCDSCYSRRCRTRVEVSVSCAVVPCRLLCGAVFHLCKEEDHLL
LCPNVREPCLNAASGCPAQLPRSSQAAHLQVCPASVVCCSMEWLRWPADDTNPHGFIALQ
DNVLKERDAQGEALDVAMALVDQSDLYSRLKMKPLYPELMEEEEEEEMKDEMKEGAAAGG
FPNGVQDRNPSEGLSENSVSESVSAEETAAICRGRGTVINREKYDLFEMMFSMDKRACDV
AQENLESSKQEAGEKGPAQGGERQEKTREAQKNSKTDGSAAPPPDTSKTGLAPWQEGVME
RLGQELTPQEYNMYLVHHGRMLLAFGQIEACTPKERDFVYGSLEPIEVQTLRSFKVPESY
RYKRRIHLYDTAARVQTESRGVDTSDLGASEEDWCTDEAATTLLGYAEMTVMGHAISESK
GADGLYVDLGTQTHFFRSAPFKGTTTLADVVADKPPKLHLQLEAEGVNSRNNRSSCVFTF
LCGHSFHRRELATHFRNVHSDIQAGLNGWFEQRCPLAYLGCTYSQRRFHPNTHEATVSYN
RQLRTFNLRPTLAPSLDNGSPSSSSEAPRKRRMGERGAEGEDSLSSLPYEVLVHVASFLD
SLSLSQLSLVSRLMRQVCSSLLQDRGMVTLRWEKKSSSRGGSKWRAKPVWEFSHLFSAVD
SWHMADTPPISAHLKVCPYYQTSERSEPVPLPSMSEKERNRRNPSLIGHFTGNR
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatcgttctcgggcctccaggacgcagcagcagcagcagcatctccactgtgac
tcctgctacagccggcgctgcaggacccgggtggaggtgtctgtgagctgcgcggtcgtc
ccctgccgcctgctctgcggcgccgttttccacctgtgcaaagaggaggaccacctgctg
ctctgccccaacgtgagggagccctgcctcaacgcggcgtccggctgcccagcccagctg
ccccgctcctcgcaggcggcgcacctccaggtgtgtccggccagcgtggtgtgctgctcc
atggagtggctccgctggcccgccgacgacacaaaccctcacggcttcatcgccctgcag
gacaacgtgctgaaggaacgtgacgctcagggggaggctttagacgtcgccatggctctt
gtcgatcagtcagatctttacagccgactcaaaatgaagcccctctatccagagttgatg
gaggaagaggaggaggaggaaatgaaggatgagatgaaggaaggggcagcagctggaggg
tttccaaatggtgttcaggacagaaatccaagtgaaggcctctctgaaaatagtgtgagt
gaaagtgtgtctgcagaggaaacggcagccatctgcagaggacgaggtacggtcatcaac
agggagaagtacgacctgtttgagatgatgttcagcatggacaagcgcgcctgcgacgtc
gctcaggagaacctggaaagctcgaagcaagaggctggagagaagggaccggcccagggc
ggcgagaggcaggagaaaacacgtgaagcccagaaaaactcaaagacggacggctccgct
gcgcctccgcccgacaccagtaagaccgggctggctccgtggcaggagggggtcatggag
cgcctgggccaggagctcaccccccaggagtacaacatgtacctggtgcaccacggacgc
atgctgctcgcctttggacaaatcgaggcctgcacgccgaaggaaagagactttgtttac
ggcagcctggagcccattgaggtccagacgctgcgctccttcaaggttcctgaaagttat
cgctacaagcgacgcattcatctgtacgacacggcggcgcgagtgcagaccgaaagccga
ggcgtggacacgtcagacctgggtgccagtgaggaggactggtgcaccgatgaagcagcg
acaaccctgctgggctacgctgagatgaccgtcatgggtcacgcgatcagcgagtcgaaa
ggtgcagacgggctctacgtagacctggggacgcagacgcacttcttccgctcagcaccg
tttaaagggacgacgaccctggcggacgtggtggccgacaagccgccaaagcttcatctg
cagcttgaagcggagggcgtgaacagcaggaacaacagatccagctgcgtcttcaccttc
ctctgtgggcactccttccaccgcagagagttggccacacacttcaggaacgtgcacagc
gacatccaggcaggtctgaatggatggttcgaacagaggtgtcccctggcgtatctgggc
tgcacctacagccagaggaggtttcaccccaacacacatgaagctaccgtctcctacaat
cggcagctgaggactttcaacttgcgtccgactctggccccctccctggacaacggctca
cccagcagctcctccgaggctccgaggaagaggaggatgggtgaacgtggagctgaagga
gaggactccctcagctcgctgccctacgaggtgctggtccacgtggccagcttcctggat
agcctgtccctgtcccagctgtccctggtgtcccggctgatgaggcaggtttgctcctcc
ctgctgcaggacagagggatggtcacgctccgctgggagaagaagagctcctcacgtgga
ggatccaagtggagggcaaagcctgtgtgggagttcagccacctgttctcggcggtggac
tcgtggcacatggccgacacgcctcccatttctgctcatctaaaagtctgcccttactac
cagacctccgaacggagcgagccggttccccttcccagcatgtctgagaaggagaggaat
cgcaggaacccaagcctcatcggccattttacaggaaaccgatga
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