Kryptolebias marmoratus (mangrove rivulus): 108239057
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Entry
108239057 CDS
T05608
Name
(RefSeq) afadin
KO
K05702
afadin
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04517
IgSF CAM signaling
kmr04520
Adherens junction
kmr04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
108239057
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
108239057
04530 Tight junction
108239057
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GFIT
Motif
Pfam:
DIL
RA
PDZ
PDZ_6
PDZ_2
RA_2
RA_3
RASSF8-10_RA
Motif
Other DBs
NCBI-GeneID:
108239057
NCBI-ProteinID:
XP_037833875
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All DBs
Position
LG10:5736175..5753590
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AA seq
1223 aa
AA seq
DB search
MSDEEEREKLAKVIRQWNSSRLDLFEMSQPDEKLEFHGVIRFYFEDDIKGNVATKCLRVS
SSSPSREIVETLSEKFRPDMKMLSTNYSLHEIHTDKERKLEQDEKPLIVQLSWKSDSRGG
RFVLKKDQDSLEESCLEREKGGVLQTFKRTLSRKGKKAAGLTQGAENGSAEELLNVTSLR
LSNFSTRRHSKGNERQQSQTLEDFSKQPGLPVRVQISDNAEEAFLSAVINYTNSSTVHFK
LSPAYILYAASRFVLLRHHSRGSQSSGSAHTVASITNKMVAMTRNVIQRQQTIAGALAFW
MANSSELLNFLKHDEDLRPLTQQSQLDLSHLVQKAYSLLLRCQQNELRKHLPIFLIDPEQ
HGALPAGIEMVLNTLMNAMSLFRRCRVNPALTIQLFSQLFHFISAWLFNQLMKPEATAPG
LRSHYWGSALRRRLAPIEAWAERQGLELAADCHLGHIIQATTLLTMNKYSTQDAKDIRST
CFKLNSLQLRVLLAGYLYATNEPHIPPDLIDAVVGAAGASDLSQSEGQDIQLEESLDLPL
PFLLPEGGYSCDTVRGIPQGFQEFLEPICQKGLCSLTRHPKSKGDWTVYFSELAHTEEDT
YLEIQRQPEIETISLHKPLNSGMGISIVAAKGAGQENVGIYIKSVVRGGPAEMSGRLAAG
DQLLSADGQSLLGLSQERAAAVMTQTGPVVTLQVAKSGASYHGLEALLNDSTPGDEDHPK
EASMPPCVVDLCPSGRLLGGSRSKKEQIMQRNRQLYRSNPNMTADFGLQGGEESADPDVK
RNIATSISSINLCTDTFQREYLTLPNPKSRDRVESELSRPQQTFKASLSPSHGQSSCYRT
LMRQALSQESLCVDSGGPLLDKRQSTREQRDQISSSPIRSSVSTHNICSDHSSPLKQQQG
SHKSTAGAWRTPFSQQSTPSARPICIDIPLTRAVSAQSNPLLSTFQQSSLVAVKRSQALK
TKQSPQSPIYASPISATKKQPRPPVPWQQQRPSTCGGRAEKPQVSVTPAKHVSFQEPPSK
PKTAGPVKQRDRRELRDPWRREAQEKLREQGRLQAVELLQKEVQLLQAKAERTAAENEQL
GRLSLEWRFQMRLQEVQKRGEEEEEDEDWDTMVTLQQLGDTTPKAENNGCCGGNNWEQKE
EKQTGSHFSHKEDKEKGANELKQDDYVTQTENVPKQTCKKRKTIQVFRLYFRRNPEERIK
RASAPEKLPFGERRRLFTLASSA
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacgaggaggaacgggagaaattagctaaagtcatcagacagtggaacagcagc
agactggacctgtttgaaatgagccaacctgatgagaagctggagtttcatggtgtgatt
cgcttctactttgaggatgacataaagggaaatgtggccacaaagtgtctgcgtgtttcc
agcagctctccaagccgagagattgttgaaacgctgtcagagaaattcaggcctgacatg
aaaatgctgtcgactaattattctcttcatgaaatccacacagataaagaacgtaagttg
gaacaagatgagaaacctttgattgtccaattaagctggaaatcagacagccgaggagga
cgctttgtgctgaagaaagaccaggacagtttggaggaaagctgtctggagagagagaaa
ggaggcgttcttcaaacctttaagaggacactgtcgaggaaaggaaagaaagcggcaggc
ctcacacagggggcagagaacggatcggctgaagagttgctgaacgttaccagcctgcgt
ttgtccaacttcagcactcggagacactccaaaggaaacgaacggcaacagagccagact
ctggaggatttttcaaagcagcctggattaccagtcagagttcagatcagtgataatgct
gaggaggccttcctgtcagcggtcataaattacaccaacagctccacagttcatttcaag
ctctcacctgcgtacatcctttacgctgcgagccggtttgttctgcttcgccatcacagc
cgaggctctcagtcctctggaagcgcacacactgtcgcgtctatcacaaacaaaatggtg
gccatgacaaggaacgtgatccagagacagcagacaatcgcgggggctcttgccttctgg
atggccaactcgtctgagctgctgaacttcctcaaacacgatgaagatctccgcccgctc
acacagcagagtcagctggacctttcccacctggtgcaaaaagcctacagcctcctgctt
cggtgccaacagaatgagctgagaaaacatttaccgatttttctgattgatcctgagcag
cacggcgcactgccagctggtatagagatggtgctgaacaccttgatgaacgccatgtcg
ctgtttcgccgctgtcgggtcaacccggccctcaccatccagctcttctctcagctcttt
cacttcatcagcgcctggctttttaaccagctcatgaagccagaagccaccgctccaggc
ctacgctcccactactggggatctgccctgcgccggaggctggcgcccatcgaagcctgg
gcggagaggcagggcctggagctggctgctgactgccacctgggacacatcatacaggca
accacccttctgaccatgaacaagtactcgacgcaggacgccaaggacatccggagcacc
tgtttcaagttgaactcgctgcagttgcgggtgttgttggctggctacctctatgcaacc
aatgagcctcacatccctcctgatttgattgacgctgtggtaggagctgctggggcctcg
gacctgagtcagagtgagggacaggacatccagctggaggagagtctcgatctgcccctg
cctttcctgctgccggagggagggtactcctgtgacaccgtgagaggcatccctcaaggg
tttcaagagtttttggagccaatatgtcagaaaggtctctgttctttgacacgtcacccg
aaatccaaaggcgactggactgtgtacttcagtgaattagcacatactgaggaggacaca
tacttggaaatacaaagacagccagagattgagaccatctctctgcacaaacctctgaac
agcgggatgggaattagcattgtagctgctaagggagcaggccaggagaacgttgggatc
tatattaaatctgttgtcaggggaggaccggctgaaatgagtgggaggctggcagcagga
gatcagctgctcagtgcggatggtcaaagtctgcttggactcagccaagaaagggcagca
gcagtcatgacgcagaccggccctgttgtgaccttacaggttgcaaagtctggagcgagc
tatcatggtctcgaggctctgctgaatgacagcactccgggcgatgaagaccaccctaaa
gaagcttctatgccgccctgcgttgtggacctctgcccctcagggaggctcctcggaggc
agcaggagcaagaaagagcagataatgcagagaaacaggcaactttaccgctccaacccc
aacatgaccgcagactttggcctgcagggaggagaggaatcggctgaccctgacgtgaaa
agaaacatcgctacgtctatttccagcatcaacctttgcaccgatacatttcagagagag
tacttgacacttccaaaccctaaatccagggacagagttgaatctgaactgagccgacca
cagcaaaccttcaaagcgtcgttgagtccttctcatggccagagttcctgttacagaacc
ttaatgcgtcaggctctctcacaagagagtttgtgcgtggacagtggaggacccctgctg
gacaaaaggcagagcacacgggaacaaagggaccaaatttcatcctccccgattcgctca
agtgtttctacacacaacatctgctccgatcacagctctcctttgaaacaacagcagggc
agccataaaagcactgctggtgcctggagaacccccttttcacagcagtccacgccttca
gcccggccgatatgcatcgacatccctctaaccagagctgtgagcgcacagtcgaatcct
ctgctcagcaccttccagcagagctctttggtagcggtgaagaggagccaagctctgaaa
accaagcagagccctcaaagtcccatttacgcgagtcctatatctgcaaccaagaagcaa
cctcggcctccggttccgtggcagcagcaaagaccaagcacctgtggaggccgagcagaa
aagccccaagtgagcgtcactccagcaaaacacgtttccttccaagaaccgccctccaag
ccgaagaccgcaggtcccgtaaagcagagagaccgccgggagctgcgtgacccctggagg
agggaggcccaggagaaactgcgggagcaggggaggcttcaggccgtggagctcctgcag
aaggaggtgcagctactccaggccaaagccgagcgaacggcggcggagaacgagcaactc
gggaggctcagcctggagtggcggttccagatgaggctgcaggaagttcagaagagggga
gaggaagaggaggaggacgaggactgggacacgatggtgaccctgcagcagcttggagac
acaacgccaaaagccgagaacaatggatgctgtggtggaaataactgggaacagaaagaa
gaaaagcagacagggagtcatttctcccacaaggaagacaaagaaaaaggagcaaacgaa
ctgaagcaggacgactacgtgacgcagacagaaaatgtgccaaaacagacgtgcaaaaag
aggaaaacgatacaagtctttcggttgtattttcgcagaaacccggaggagagaatcaag
cgagcgtcggctcctgaaaagcttcccttcggggagcgtcggcgcctctttacccttgca
tcgagtgcataa
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