Kryptolebias marmoratus (mangrove rivulus): 108239074
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Entry
108239074 CDS
T05608
Symbol
stxbp5b
Name
(RefSeq) syntaxin-binding protein 5 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
kmr04131
]
108239074 (stxbp5b)
Membrane trafficking [BR:
kmr04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
108239074 (stxbp5b)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
108239074 (stxbp5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_HPS5
ANAPC4_WD40
WD40_Prp19
Beta-prop_IFT140_1st
WD40
Beta-prop_TEP1_2nd
Lgl_C
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_NUP159_NUP214
EIF3I
Synaptobrevin
Beta-prop_VPS8
Beta-prop_Vps41
WD40_like
Motif
Other DBs
NCBI-GeneID:
108239074
NCBI-ProteinID:
XP_017277042
UniProt:
A0A3Q3AVR9
LinkDB
All DBs
Position
LG10:5250369..5291340
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AA seq
1178 aa
AA seq
DB search
MKKFNIRKVLDGLTAASSSSAAAAAQPGTPRENDVVQETLQSEHFQLCKTVRHGFPHQPS
SMAFDPVQKILAIGTQTGALRLFGRAGVECYCQHESGAAVIQLQFLINEGALVSALADDS
VHLWNLRQKIPAILHSLKFNRERITYCHLPFQSKWLYIGTERGNIHIVNVESFTLSGYVI
MWNKAIELSTKTHPGPVVHISDNPMDEGKLLIGFECGVVVLWDLKCKKADCRYNYDEAIH
SVAWHHEGKQFVCSHSDGTLTTWNIRVPAKPAQILTPHGKQPKDGKKPEPCKPILKVEYK
TTRAGDPFMVLSGGLSYDTVGRRACLTVMHGKSTAVLEMDYPIVDFLTLCETPYPNDFQE
PYAVVVLLEKDLVVIDLGQIGYPIFESPYPLSIHESPVTCCEYVADCPAEIIPALYSVGS
RQKRQGYSKKEWPVSGGNWGQGNQSYPEIIITGHADGSIKFWDASALMLQVLYKLKTVKV
FERARGKEEKPNTDIVDEDPFAIQTLFWCPESRMLCVAGVSAHVIVYRFSKQELTTDVVQ
LLEVRMQCDFNDVDSPDPGGEQTPTLPTSAASCSPQETEPPNQLSIGSNSSEGPRDNIPC
LQVRSSPLKQSPGYQVELVIQLVWVSGEPPQQITSLAVNSSYGLVVFGNSNGLAVVDYLQ
KTLLLNMGTSELYSPSDPCQRQPRSPRKPRQPSGGLCDSNDGSNNSEDRCKSPTSGSTSP
FNSDDERKQNFIEKVKVKSRRFSKTVANDFAKMSRKISSPSEQKPDLENRTQLWRSVTCK
RTRMCLKGPINRTKSDPNYYAKDNAFSRSRSSSVTSIDRESRETISSFYFCESFPRKSES
LVSPCLLVGTTQGSVMMLALCLPPGGDQRLQQPVSFSSCGTLVRLKGGILTMALLDATGT
LLPPSYEQWYDPNASDEEKEKGRRRRPASPPSSQEGQDTQFTVLCSEKQAKVVAMPSHTC
IYKHNITETSFVLRADVVQMAGAYCIACFCANGHIMTLSLPSLRPLLDVNYLPLTDMRIA
RTFCFSNLGQALYLTSPTEIQRITYSQETCDNLQEMLSELFTPVETPEAPNRGFFKGLFG
GGAQSLDREDLFGETTAGKASRSLAQHIPGPGSMEGMKGAASGVVGDLARARIALDERGQ
KLGELEERTAAMMASAESFSKHAHDMMLKYKDKKWYQL
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttaacattaggaaggtgctggacggcttgacggcggcgtcctcctcctcc
gccgccgccgccgctcagccgggtactcccagggagaacgatgtcgtccaggagaccctc
cagtcggagcatttccagctgtgtaagactgtgcgtcatggctttccacatcaaccgtcc
tctatggcttttgaccccgtacagaaaatcttggccattgggactcagactggagctttg
agactctttggccgtgcaggtgtcgagtgctactgtcagcatgagagcggtgctgctgtc
atccagctccagttcctcatcaacgagggggcgctggtgagtgccttagctgatgacagc
gtccacctgtggaacctgagacaaaaaatccctgctatcctgcattctctcaagtttaac
cgggagagaatcacatactgccacctgcccttccagagcaaatggctgtacatcggcaca
gaacggggaaacatccacattgtcaacgtggagtccttcactctctcaggctacgttatt
atgtggaacaaagccatcgaactgtccaccaagacacatccagggcctgttgtgcacatc
agtgataaccccatggatgaaggcaagcttctgattggatttgagtgcggggtggtcgtg
ctgtgggatttaaagtgcaagaaggccgactgccgctacaattatgatgaggctatccac
tcggtggcctggcaccacgaggggaaacagtttgtttgcagccactccgacggcactttg
accacgtggaacattcgagtcccggccaagcctgcgcagatcctcacaccccacggaaaa
cagcctaaggatggaaaaaagccagagccatgcaagcctatcctgaaagtggagtacaaa
actacaagggctggggacccgttcatggtcctgtccggtggcctgtcgtacgacactgtg
gggaggagagcctgtttgactgtgatgcacggaaagagcactgccgtcctggagatggac
tatcccattgtagactttctaacgttgtgcgaaactccttatccaaacgactttcaggag
ccttacgctgtggtggtcctcctcgagaaggatttagttgtaatagacctcggacagatt
gggtacccgatatttgagagtccgtaccctctgtccatccacgagtctccggtgacctgt
tgcgagtacgttgccgactgccccgctgaaattattcctgcactttactcggtcggcagc
cggcaaaaacgacaaggttacagcaagaaggagtggcctgttagtggtggaaactggggc
caaggcaatcagagttacccagagatcatcatcacagggcacgctgatgggtcaattaaa
ttttgggacgcttctgcattaatgctgcaagtgctgtacaagctgaagactgtcaaggtg
tttgagagggctcgcggtaaggaggagaaaccaaacacagacatcgtagacgaagacccg
tttgccatccagaccttgttctggtgtcctgagagcaggatgctctgcgtggctggagtg
tctgcgcacgtcatcgtctacaggtttagcaaacaagaactcaccaccgatgttgttcag
ctcctggaggtgcggatgcagtgtgactttaatgacgtcgactcccccgatccaggaggg
gagcagacccccaccctgccaacctctgcagcttcctgcagccctcaggagactgagcct
cccaatcagctctctataggcagcaactcctccgaaggaccccgagacaatataccatgc
ctacaggtgcggagctccccgctgaagcagtctccgggctaccaggtggagctggtgatc
cagctggtgtgggtgagcggggagccgcctcagcagattaccagcctggcagtcaactcc
tcctacggccttgtggtgtttggaaacagtaatggtctggctgtggtggactacctccag
aaaaccctgctgctcaacatgggcacttcggagctgtacagcccgtccgacccgtgccag
aggcagcctcgctccccacgtaaaccacgccagccctctggaggactgtgtgactccaac
gatgggtcaaataactcagaggaccgatgcaaatcacctacttcaggatctacttcacca
ttcaattcagatgatgaacgaaagcagaacttcatagagaaggtgaaggtaaaaagcaga
cgcttttccaagacggttgccaatgactttgccaagatgtctcggaaaattagctcgcct
tctgagcaaaagccagatctggagaataggacccagctgtggcgctctgtgacgtgtaag
agaaccaggatgtgcctgaaggggcccatcaatagaactaagtcagaccccaactattat
gccaaggataatgcgttcagccgctcgcggagttcaagcgtaaccagcatagacagagaa
tctcgagagaccatctcctctttttacttctgcgagagtttccccaggaagtcggagagc
ctggtcagcccctgtctgttagtggggaccacccagggctctgtgatgatgctggctctc
tgtctgccaccgggtggggaccagaggctgcagcagccagtcagcttctcctcctgcggc
accttggtcagacttaaaggagggattttgaccatggcccttcttgatgccactggaact
ttgctgcccccttcgtatgaacagtggtatgacccgaatgcctcagatgaagaaaaagag
aagggccggcggcgcaggcctgcctctcccccgtcttcacaagaaggccaggacactcag
tttaccgtgctgtgttcagagaaacaggccaaggtggtggccatgccctcccatacctgc
atctacaaacacaacatcacagagacgtctttcgtgctgagggctgatgtggtgcagatg
gctggggcttactgcatcgcctgtttctgtgctaacggccacattatgactctcagtttg
cccagtctacggcctctgctggatgtgaactacctgccactgaccgacatgcgaatagca
agaacattttgcttttccaacttgggtcaggctctgtacctcacctcccccactgagatc
cagaggatcacctacagccaggagacttgtgacaacctacaggagatgctcagtgagtta
tttacgcccgtggagacaccggaggctccaaacagaggattcttcaaaggcctgtttggt
ggaggagctcagtctttggacagggaggacctgtttggtgaaacgactgctggtaaagcg
tcccgcagcctggcccagcacatccccggccccggcagcatggagggcatgaagggggca
gcgtccggggtcgtgggtgatctcgccagggccaggatagctctggatgagagggggcag
aaactgggcgagctggaggagaggacggcagccatgatggccagcgcagagtctttctcg
aaacacgctcatgacatgatgctgaagtacaaagataaaaagtggtaccagctctga
DBGET
integrated database retrieval system
