Kryptolebias marmoratus (mangrove rivulus): 108239091
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Entry
108239091 CDS
T05608
Symbol
smc6
Name
(RefSeq) structural maintenance of chromosomes protein 6
KO
K22804
structural maintenance of chromosomes protein 6
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kmr03400
]
108239091 (smc6)
DNA repair and recombination proteins [BR:
kmr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
108239091 (smc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
TMF_DNA_bd
CCDC93_CC
AAA_29
HR1
DUF745
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
108239091
NCBI-ProteinID:
XP_017277077
UniProt:
A0A3Q3AX58
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All DBs
Position
LG10:complement(5480743..5519479)
Genome browser
AA seq
1092 aa
AA seq
DB search
MSKRKGKVIHEEATLKVRKLTAVTTENAPDDASRQGPPPNSFAHSASGDIGLIESITLKN
FMCHHSLGPFQFGPHVNFIVGNNGSGKSAILTALIVGLGGKATVTNRGVSLKDFVKAGEN
TADITVKLRNKGADAYKKDVYGDYISVEQRILSDGSRSYKLKNKSGQIVSNKKEELTAIL
DHFNIQLDNPVSILSQEMSKQFLHSKNESDKYKFFMKATLLEQMKRDYIHIKHTETITRQ
QVERQEECLKDLKQEFLQKKERYENLSSYSELMEVLENLKKKMAWCLVREKEQSIQQLKE
ETEKEENNNKLQDNLRLCQTKIVQVEKRLQLIKKRSDSLKEEQKTLTGDNLKLKQQVKNI
SKAHKEQELVYFRALNKLKQSEREQNLLQEKINKAKTSEILNNSGKTKHTKQQLSLSNLK
RQLAELQSTCTQLNEEIKKKHQGLLKGKEERDKLRGEEKSLQFAYESKLKRKNQLLASRS
NKLKRFGDFVPDLMAAIDEAYAAGQFLKRPVGPIGACISLKDPSLAVAVECCLRSFMKAF
CCDNYKDESILQELMGRFYPKGNRPQIIVSQFSDKLYNVYGRKVHHPDYPAVLDTITATS
PIIINCLIDMRGIETILVIKEKNKARAVMQRGRPPKNCREAFTAEGDQVFPNRYYTSEFS
MAKYLSGDIETEISLLESELENLQAQLSRFQLQVSSVTEDIVTMENGLNNTIKTLKKTQT
SENQVKAAITELETATEERSDDISSLEDVAQENHQKIEAEEQIVQEAKAEFDKHKKMLEE
ADSKYSSVRNKIDQLSEEIEPLKDEQVKLEAECVKHERNLKILDKKLKTHEDNIQAMKSD
LSEKEEELQEYVDKATQISPERLIVTCSTKSIDTEITRLKKKLKVYESSHGEQEQVVREY
AEALSLYKEKTIQVRDLRKFIDRLRNIMSDRQNRYKILRRSLSVRCKLYFNNFLIKMNCC
GSMIFDHNNETLSILVKPPGREKDGASDMRSLSGGERSFSTVCFMLSLWEITESPFRCLD
EFDVYMDMHNRRICLDLLLELSERQHLRQFIFITPLNTSFLLTNALIRIHHLHDPERQDN
HSGDKDVETYTR
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagaggaaaggtaaagtgatccatgaagaggctactctgaaggtccgtaaactg
acagctgtgactactgaaaatgcaccagatgatgccagccgtcagggaccgcctccaaat
agttttgctcactccgcttcaggagacatcggtctcattgagagcatcactttgaaaaac
tttatgtgccaccattctctgggtccgttccagttcgggccccatgtgaacttcatcgta
ggcaacaatggaagtggaaaaagtgccatcctcaccgccctgattgtaggcctcggtgga
aaggccactgtgacaaacagaggggtgtcgctgaaggattttgtgaaagccggtgaaaac
accgcagatataacagtaaagctgagaaacaaaggagcagacgcctacaaaaaggacgtc
tacggcgactacatctccgtcgagcagcgcatcttaagcgatggatcccggagctacaag
ttgaagaacaaatcaggtcaaattgtctcaaacaagaaagaagagttaacagcaattttg
gaccactttaacatccagctggacaacccagtatccatcctcagccaagaaatgagcaaa
cagttcctgcattcaaaaaatgaatcggacaagtacaagtttttcatgaaagcgacgctg
ctggagcagatgaagagagattacatccacatcaaacacacagagaccatcactcgccag
caggtcgagaggcaggaggagtgtctgaaggacctaaagcaggagtttctacagaagaaa
gagcgatatgagaacttgtcctcttacagtgagctgatggaggttttggagaacctgaag
aaaaaaatggcatggtgtttggttagagagaaggagcagtccatccagcagctgaaggag
gaaacggagaaagaagaaaataacaacaaacttcaggataaccttcggctctgtcagact
aagattgtacaggtagagaagaggctgcagctcatcaaaaagagaagcgacagtctaaaa
gaagagcagaagactctgacaggagacaatctcaagctgaaacaacaagtgaagaacatt
agcaaagctcacaaagagcaggagcttgtttattttcgggccctgaacaaactcaaacag
tcagaacgagagcaaaaccttcttcaggagaaaataaacaaggcaaaaacaagtgagatt
ttgaacaacagcggaaagaccaaacacacaaaacagcagctgagcctgagtaatttgaaa
aggcagcttgcagagcttcagagtacatgcacacagctgaacgaagagatcaagaagaaa
catcagggacttcttaaaggaaaggaagaacgggacaagctgagaggcgaagaaaagagt
ctccagtttgcatacgagtccaaactgaagaggaagaaccagcttcttgccagtcgatcc
aataagctgaaacgttttggagactttgttcccgatctgatggctgcaatagatgaggcg
tatgctgctgggcagttcctcaagagacctgttgggccaataggggcatgcatcagttta
aaggatccctccctggctgtggctgtggagtgctgcctgcggagcttcatgaaggctttc
tgctgtgacaactacaaagatgagtcaatcctgcaggagctcatgggccgcttttatccc
aagggcaacagaccgcagatcattgtcagccagttctccgataaactttacaacgtctat
ggaagaaaagtgcatcatccagattacccagccgtgttggacacaatcacagcaacaagc
ccgatcatcatcaactgtctgattgacatgagagggatcgaaactattctcgtgatcaaa
gaaaagaacaaagcgagggccgtcatgcagagaggccggccccctaaaaactgccgtgaa
gctttcacagcagagggagaccaggtgtttccaaaccgttactacacctctgagtttagc
atggccaaatacctgagtggagatattgagactgaaataagtttgctggagtccgaactg
gagaatcttcaggctcagctgtccaggtttcagcttcaggtgagctccgtcactgaggat
atagtgaccatggaaaacggcctgaacaacacaatcaagaccctgaagaagactcagacg
tctgagaatcaggtcaaagctgcaataactgagctggagacggctactgaggagcgcagt
gatgacatcagctctttggaagacgttgcccaggagaaccaccaaaagattgaggccgag
gagcaaatcgttcaggaggcaaaggcagaatttgacaagcataaaaaaatgttagaagag
gcagactccaagtactcatctgttaggaataaaatcgatcagctttcagaagaaattgag
cctctgaaggacgagcaggtgaaactggaggcagagtgtgtgaaacatgagagaaatctg
aaaatcctagacaaaaaactgaagactcacgaagacaacatccaagccatgaaaagtgac
ctttctgaaaaagaagaagagctacaggaatacgtggacaaggctacccagatcagccct
gaacggctgatcgtcacctgcagcaccaagagcattgacacagaaatcacccggctgaag
aagaaactgaaggtgtacgagagcagccacggcgagcaggagcaggtggtcagggaatac
gctgaggccctctccctctacaaagagaaaaccatccaagtgagagatctgcggaagttc
atcgaccgtctcagaaacatcatgtcagacaggcagaacagatacaaaatactgcggagg
tccctctcggtcaggtgtaaattatacttcaataacttcctgataaagatgaactgctgc
ggctccatgatctttgatcacaacaatgagacgctttcgatcttggtaaagcctccaggc
agggagaaagacggcgcgagcgacatgaggtcgctgtccggcggcgagcgctccttctcc
accgtgtgcttcatgctctccctgtgggaaatcacagagtcgccgttcagatgcctcgac
gagttcgacgtctacatggacatgcacaatcggagaatctgtttggatctcctcctggag
ctgtcagagcggcagcaccttcggcagttcatcttcatcactcctttgaacaccagtttt
cttctaacaaacgccctcatcagaatccaccacctccatgatcctgagagacaagacaat
cactcaggggacaaagatgtggaaacgtacacaagatga
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