Kryptolebias marmoratus (mangrove rivulus): 108239292
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Entry
108239292 CDS
T05608
Symbol
cacna1ia
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I isoform X1
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04010
MAPK signaling pathway
kmr04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108239292 (cacna1ia)
04020 Calcium signaling pathway
108239292 (cacna1ia)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
kmr04040
]
108239292 (cacna1ia)
Ion channels [BR:
kmr04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
108239292 (cacna1ia)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
TMEM208_SND2
ETRAMP
Motif
Other DBs
NCBI-GeneID:
108239292
NCBI-ProteinID:
XP_017277404
LinkDB
All DBs
Position
LG12:complement(12714118..12793718)
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AA seq
2271 aa
AA seq
DB search
MVILLNCVTLGMYQPCENIDCTSDRCQILQAFDAFIYIFFALEMVIKMVALGIFGRRCYL
GDTWNRLDFFIVMAGMVEYSLDLQNINLSAIRTVRVLRPLKAINRVPSMRILVNLLLDTL
PMLGNVLLLCFFVFFIFGIIGVQLWAGLLRNRCYPEENFTVPSGMTLPAPYYRPEEDDER
PFICSLASDNGIMSCSDVPARREGGRICCLDKEDALHRQALGLSPEPLANGSGAGEALGL
CINWNQYYTRCHTGNTNPHKGAINFDNIVYAWIVIFQVITLEGWVEIMYYVMDAHSFYNF
IYFILLIIIGSFFMINLCLVVIATQFSETKQREHQLMQEQRAQCLSSSTLASMTEPGDCY
EEIFQLVCHVLRKAKRRSAALYYTLRGKPPPASGGRGNRRGGGNVNGEQHHFRQPKSIKC
PHHSKQDHSSQTQTNSISLSVPENPEDCPICALSLKEGARTAGDSTNGEESEGDAVKETD
KEEDHLGEKENRERKKKRRTCFGSCKALWTDMRRKLWGIVESKYFSRGIMIAILINTISM
GIEHHNQPDELTNVLEICNIVFTSMFTLEMILKLTAFGFFEYLRNPYNIFDGIIVIISVC
EIIGQADGGLSVLRTFRLLRVIKLVRFMPALRRQLVVLMKTMDNVATFCMLLMLFIFIFS
ILGMHIFGCKFSLKTEAGDTVPDRKNFDSLLWAIVTVFQILTQEDWNMVLYNGMASTSPF
AALYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSYSDDDRSSCNFDENDKQKDSLHL
SDPKICTLTPNGHLDPSMLPAGLFPGEKLTFSLGSRKNSVISLGRADLEKRAMYPGRGYH
NWGRPLHPQPHPLWARRSSWSSLGGRPCSSSSPTASPAFTPTSTRPFYGYGLGGLGQVVG
GSLRIRGPRASSSPQHHHLHHIHPDEEESLLSPPAVASHCLQLPPPNLHGCFAPRRDRRA
LSLEFPHVLQVPAGPQDPHHLLHHRKKSFSGGLVISSSGDLERVHQDCNGKTPLSHLQLP
LRRQTPQTRGENPVSHLITDVFPQVNARNKDKEDLDDDIDYSLCFRIQKMLEAYRPDWCE
TREDWSVFLFSPQNKFRLMCQSIIAHKLFDYVVLVFIFSNCITVALERPKILQGSLERVF
LTISNYIFTAIFVGEMTLKVVSMGLYVGEQAYLRSSWNVLDGFLVFVSLIDIVVSMAGGA
KILGVLRVLRLLRTLRPLRVISRAPGLKLVVETLITSLKPIGNIVLICCAFFIIFGILGV
QLFKGKFFYCLGPDVKNITNKSDCLLATYKWVHHKYNFDNLGQALMSLFVLASKDGWVNI
MYHGLDAVGVDQQPVTNNNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQHQEVEE
AKRREEKRQRRMEKKRRKAQKLPYYSSYGNMRLMIHTLCTNHYLDLIITFIICINVITMS
LEHYNQPHSLDLALKYCNYFFTSMFVLEAVLKLIAFGFRRFFKDRWNQLDLAIVLLSVMG
ITLEEIEISAALPINPTIIRIMRVLRIARVLKLLKMATGMRALLDTVVQALPQVGNLGLL
FMLLFFIYAALGVELFGELVCNEDYPCEGMSRHATFENFGMAFLTLFQVSTGDNWNGIMK
DTLRECPPDPSNTDVDYACNPSLQFISPMYFVSFVLTAQFVLINVVVAVLMKHLDDSNKE
AQEEAEMDAEIELELAQGTLCCMGAPGCGGGGVDKGLLPVGSVPGGPIGRKDRGSSRGER
GEGVRRLQHAVTSARMGPYNSCDSNRSSYSPAQESQWLDSVSLLIKDTLEGEMLMIDNLS
GSVFHHYSSPAPVCKDCKGQQQEQIRMAEIEQASLKSEQLSDKSSSPALPDDLSLDEHTV
YQLLSLEGKGRCSSGSHSSEEAGEEGGHNGGHQTQTAGQVQVQGPSLQSRAPSTGTESDT
VLQEVEMQTYQQHKCSPQCSPEGGVSSINNKERHKEEEEGGGGGGGGGGASGISTLFHLP
TEFFHSSGAAIPIPSRSRSLRLTRGLRLTSPSSWASFRSHGAHRKMLCAQYPSHSDSSLA
TGSSEGSLQTTLEEGLSFSVSPPQNLDLPAASLSLISPISQPEDGMTISSLVQTRKPRPN
PQSAVTLLATRGHQRSQSSGRGSTSPGYNRDDSIDPSDEDLGIGIGSSIGGCGSSQAGNS
EHLSETMSSLSLTSLLLPSSLVCLGVPVKKCNSTGSLDKGGMLLSSRGREGRREILDLEL
MDHQGFLANPWRGVLVDTRKGEGRREIEDGEHGLRGKSSSQTTVGSCRKNR
NT seq
6816 nt
NT seq
+upstream
nt +downstream
nt
atggtgatcctgctcaactgcgtgacgctgggcatgtaccagccctgcgagaacatcgac
tgcacctcggaccgctgccagatactgcaggcctttgatgcatttatctacatcttcttt
gcactggagatggtgataaagatggtggctctggggatctttggtcgtcgctgttacctg
ggagacacctggaaccgactggactttttcatcgtcatggctgggatggtggaatactca
ctggacctgcagaacatcaacctgtcggccattcggacggtgcgggttcttcggccactg
aaagccatcaatagagtcccaagtatgcggatcctggtgaacctgctgctcgacactcta
cccatgctgggcaacgtgctgctgctctgcttcttcgtcttcttcatctttggcatcatc
ggtgtgcagttatgggcagggctattgagaaaccgctgctaccccgaggagaacttcaca
gtcccttcaggtatgaccctgccggccccgtattaccgaccagaggaagacgatgagcgc
cccttcatttgctccctcgcttcggataacggcatcatgtcgtgttctgacgtgccagca
agacgtgaaggaggacgcatatgttgtctggacaaagaagatgctctgcacagacaggct
ctgggtctgagccctgagcctctggcgaatggcagtggtgccggtgaggcgctaggtctg
tgcatcaactggaaccagtattacactcggtgccacactggaaatacgaaccctcacaaa
ggggccatcaacttcgacaacattgtttacgcctggatcgtcatttttcaggtgattacc
ttagagggctgggttgagatcatgtattacgtgatggacgcccattccttctacaacttc
atctacttcatcttactcatcatcattggctcattcttcatgatcaacctgtgcctggtg
gttattgccacccagttctcagagaccaaacagcgggaacaccagctgatgcaggagcag
agggcgcagtgcctgtcctcctccaccctggccagcatgactgagccaggagattgttac
gaagagatcttccagcttgtctgccatgtccttcgcaaggcgaagaggaggtcagcagct
ctctactacactctgaggggcaagccccctccggctagtggaggcagggggaacaggcga
ggaggggggaatgtgaacggagagcagcatcatttcaggcaaccaaaatcaatcaaatgt
ccacaccacagcaaacaggaccacagctcacagacacaaaccaactccatcagtctgtct
gtccccgagaacccagaggactgccctatctgcgcgttgtctttgaaggaaggtgccagg
actgcgggagattcaacaaacggcgaagaaagtgaaggggatgccgtgaaggaaacagac
aaagaggaggaccacttaggggagaaggaaaacagggagaggaagaagaagaggaggaca
tgctttggaagttgtaaggccctttggactgatatgaggaggaaactttggggcattgtg
gagagcaagtacttcagcaggggcatcatgatcgctattcttattaacaccatcagcatg
ggcatcgagcaccataaccagcctgatgagctgaccaacgtcctggagatctgtaacatt
gtcttcaccagcatgttcaccctggagatgatccttaagctcactgcttttggcttcttc
gagtacttgaggaacccgtacaacatcttcgacggcatcattgtcatcatcagcgtgtgt
gagatcatcggccaggcagatggcggtctgtcagtgctgaggacgttcaggctgttgagg
gtcattaagctggtgaggttcatgccggcgctgagacggcagcttgtggtgctgatgaag
acgatggacaacgtggccaccttctgtatgctgctcatgctctttatcttcatcttcagc
attctggggatgcacatatttggctgcaagttcagtttgaagacggaggcaggagacaca
gtgcctgacaggaagaactttgactccttgctttgggccatcgtcaccgtctttcagatt
ctcactcaggaggactggaacatggtgctgtacaacggcatggcgtccacctctcccttc
gctgctctctacttcgtagctctgatgacatttggaaattacgtgctctttaatttgctg
gttgccatcctggttgaaggtttccaagctgagggtgatgcaaaccgctcttactcggac
gatgacaggtcttcctgtaattttgacgagaacgacaagcaaaaagactccctgcacctc
tcggaccccaaaatttgtaccctaaccccgaatgggcatctggacccatctatgttgccc
gctggtctgtttcctggagagaagttgaccttttcgcttggctcaagaaagaatagtgta
atttctcttggcagggctgaccttgagaagagggctatgtatccaggtcgaggttaccac
aactggggccgtccgctccacccccagcctcaccccttgtgggctcgtcgttccagctgg
agcagcctgggaggccgaccctgctcctcctcatctcctactgccagtcctgccttcact
cctacgtccacaaggcccttctatggctacggcctcgggggtcttggacaggtggtcgga
ggaagccttcgcattcgtggtccccgtgcctcctcatcccctcagcatcaccacctccat
catatccatccagatgaggaggagtctcttctctctccccctgctgttgcatcccactgt
ctccagcttccccctccgaatctccacggatgtttcgcacctcgccgggaccgccgagcc
ctctcgctggagttcccccacgtcctgcaggttccggctggaccccaagatccacaccac
ctgctgcaccacagaaaaaagagcttctctggggggctggttatcagcagcagtggtgac
ctcgaaagagttcaccaggactgcaacgggaagaccccgctgtcacacttacagctgcct
ttaagacggcagacgcctcagaccagaggggaaaaccctgtcagccacctgataactgat
gtcttcccccaggttaacgcgcgcaacaaggacaaggaggacctggatgatgacattgat
tatagtttgtgcttccgcatccagaagatgttagaagcatacagaccggactggtgcgag
acaagagaggactggtccgtcttccttttctccccacagaacaagttcagattgatgtgc
cagtccatcatagcccataagctgtttgactacgtggtattggtcttcatcttctccaac
tgcatcacagtggctctggagaggcccaagatactgcagggcagcctggaacgtgtcttt
ctcaccatctccaactacatctttacagccatatttgtgggcgagatgactctcaaggtt
gtttccatgggtttgtatgtgggcgaacaggcttatctgcggagcagctggaacgttctg
gatggattcctggtttttgtgtctttgattgatattgttgtgtctatggcgggaggggca
aagatactgggtgtgctccgggttctccggctgctcagaacactgcgtcccctcagggta
attagcagagctccggggctgaagctggtggtggagactctcatcacgtctctaaaacct
atcggcaacattgtcctgatctgttgtgcattcttcatcatctttgggatccttggagtt
cagttatttaaaggcaaatttttttactgtctcggccctgatgttaaaaacatcaccaac
aagtctgactgtctgctagccacctacaagtgggtccatcataagtacaactttgacaac
ttgggacaggccctgatgtccctgtttgtgctcgcctccaaggatggatgggtcaacatc
atgtaccacggcctggatgcagtgggtgttgaccaacagccggtaaccaacaacaaccca
tggatgctgctatatttcatctccttcctcctcatcgtcagcttctttgtcctgaacatg
tttgtcggggtggtggtggaaaacttccacaagtgccggcagcatcaggaggtggaggag
gccaagaggcgtgaggagaagcggcaacggcgcatggagaagaagaggaggaaggctcag
aagctgccttactactccagctatggcaacatgcgcctgatgatccacacactctgcaca
aaccactacctggacctcatcatcaccttcatcatctgtatcaatgtgatcacaatgtcc
ttggagcactacaatcaacctcactctttggatctcgccctcaagtactgcaactacttc
tttacctccatgtttgtgctggaggctgtactaaaactcatcgcctttggatttcgacgc
ttcttcaaagacaggtggaaccagctggatctggccatcgtgctcctgtccgtgatgggc
atcactctggaggagattgagatcagtgctgccctgcccatcaaccccactatcatcagg
atcatgagggttctgaggatagcccgagtgctgaagctgctgaagatggcaacgggaatg
agagccttgttggatacagtggttcaagccctgcctcaggtgggtaacctgggcctgctc
ttcatgctgctgtttttcatctacgccgccttaggagtagagctttttggagaacttgtt
tgcaatgaagactatccgtgcgaaggtatgagtcgtcacgctacgtttgaaaactttggc
atggccttccttactttgtttcaagtctctacgggcgacaactggaatggcatcatgaag
gacacattgcgggagtgcccaccagacccatctaacactgatgtggactatgcctgcaat
ccaagccttcagtttatctcgcccatgtactttgtctcctttgtgctcaccgcccagttt
gtgctcatcaatgtggtggtggccgtgctgatgaagcacctggacgactccaacaaggag
gcccaagaggaggcggagatggatgcagaaattgagctggagctggcccagggcaccctc
tgttgcatgggcgcccccggttgcgggggtgggggggtggacaaaggactacttcctgtc
ggatctgtgcctggaggcccaatagggaggaaggacagaggaagctccagaggggagagg
ggagaaggagtgaggaggttgcaacacgcggtaaccagtgcgcgcatgggaccatacaac
tcctgtgactccaaccggtcatcctactctccagcacaagagagccagtggttggacagc
gtatctctcctaatcaaggacacgttagaaggggagatgctgatgatcgacaacctctcc
ggttctgtcttccaccactactcctctccggcgcctgtctgcaaagactgcaagggccag
cagcaagagcagatcagaatggcagagattgagcaggcgtcgctgaagtcggagcagctc
tcagacaaatcctcgtcccctgctttgccggatgacctcagcctggacgaacacacagtc
tatcagctgttgtcccttgagggaaagggaaggtgcagtagtggctcccacagctctgag
gaagctggggaagaaggaggccataacgggggccaccagactcagacagcagggcaggtc
caggtccaggggccgagcctgcaaagcagagcccctagcactggtactgagtcggacact
gtgctgcaagaggtggaaatgcaaacataccaacaacataagtgctcacctcagtgcagc
cctgaaggtggggtttccagcatcaacaacaaggaaagacataaagaagaagaagaagga
ggaggaggaggaggaggaggaggaggagccagcggtatttctaccctcttccatctgcct
acagagttcttccactcttcaggggcagccatcccgataccttcccgcagtagaagccta
cgtttgacaaggggccttaggctgacctccccatcctcctgggcctcattccgctcccat
ggagctcatagaaagatgctctgtgcgcagtatccatctcacagtgactcatcacttgcc
actggcagctctgaaggcagccttcagaccactctggaagaaggactgagcttcagtgtc
tctccaccacagaacttggatttgccagcagcttccttatcactcatatcccctatctca
cagcctgaagatggaatgaccatttcttctttggttcagacccgaaagccaaggccaaac
ccccagtccgctgtgacccttctggccaccaggggtcaccagcggagccagagcagcggg
cgaggcagcactagcccaggctacaaccgtgatgactctatcgacccctcagatgaggac
ttgggcataggcattggatcgtctatcggtggttgtggctccagtcaagcaggtaacagt
gaacacttgtcagagacaatgagcagcttgtcgctgacgtccctgctgttgcccagctcc
cttgtgtgccttggagtgccagtaaagaagtgcaacagcacaggtagccttgacaaagga
gggatgctgctgtcttcccggggcagggagggccgcagagagattttagacctggagctt
atggaccaccagggcttcttggccaacccgtggagaggtgtattagtggataccagaaaa
ggagaaggaagacgggaaattgaagatggagagcatggtttgagaggaaagagctcaagc
caaacaacagtagggtcttgtcgaaaaaatagatga
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integrated database retrieval system
