Kryptolebias marmoratus (mangrove rivulus): 108239302
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Entry
108239302 CDS
T05608
Name
(RefSeq) retinoic acid-induced protein 1
KO
K19749
retinoic acid-induced protein 1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kmr03000
]
108239302
Transcription factors [BR:
kmr03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
108239302
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
108239302
NCBI-ProteinID:
XP_017277425
UniProt:
A0A3Q3BNQ0
LinkDB
All DBs
Position
LG12:complement(11601409..11654720)
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AA seq
2211 aa
AA seq
DB search
MQSFRERSSGYHSNQPCYQQEPHELSRLETYRQHPHHPHPQHPHPGPGPHPGPGPGQSRS
GYEAHTLASSASMPPAGGAGIGGGPKDCYGQQNYTGYQGNSGGNGNGNGGSTASQTKKTF
RGSKVPPPNPTQHLQSPGGYSNHMGPGSYSAQYMSEGHLQQKWEDPAQLAQYDQEIVGRL
EASATPAPSSSQFVDSNMLGHSQTQCHQPSTPNYTSPHHQPHPPNPAPSPLMYPQSHLHY
PQHSPSPSSYMEKCSPMPHCYKGYNMPPNSQYARQMSSHSSLKQGAYRSPQNSYGYQQSN
PRGYEQQPPLQAMANPQEPHPKYQHYNQPQQNYCLSELPVRSPEQYYQTCSPSSSHSPAR
SVGRSPSYSSTPSPLMTNPESFQYGQPPMTPGAASSSSSSSAGMQEQASANTMLMPPRSH
PSPNIPHATPHSYSTTPQVPTMKERFSEKLLSNPSLWSLNALTSQVENISNNVQQLLLSE
ALVANKKGGKRSSGGSNSSGGSGASSKKGEEYKSPPYPDGCGNVGGGPIQDPYATPQHQS
LPMELHEGGYSSSSDEPLDRGYYYFGQGRSPAQAHNNAQLSLDTASSCSIASPDDMSTRS
GDSGLHNLTPDPTRCQMGQGGDGMSTPAKSIGDETSPTSITVPSPMKQERDSPADIQHIN
QPVKENFEESAWTEKSAEKDKVTTAKTPDSVRDSDTANPTERQEKWSDEEKSPYSKVSTE
MAEKSYCYAETTYQDVQGKYDSDARDSVEQSPAALSDSSNKDHFGQEIKSEAFKSESPTA
SESSVKTLPFTSRGDLEQDQYFTEKEESSENTSPTPEVEVLEDSSSDKRESRDQENEEEG
EDEERGKEIIEEEQCDIQKTTTSLSPLSIGEVEEEQKEEEIENQSLTQEHISSSDSQENY
SGNVSSKTECQNSMLNTDNDFAGAPGHLNAAAATTAADAFSRESAIGDTAPQSQSATPIF
SALNDKTAPPGQIRDHIDHGDAKVLEPDSPQLPGKSILPSAPSWADTPPSPKKGDEDMEP
GISCASAVTPLAKPEPVAPSAQPRAFGRKHARGRRRIVHSGVGIQRQLSLEREGEKEEES
TNSPTQKTRMPPIKTVLFSDQTNLAHQEPIVSPTPKMSTDAFQSRMCTRSFNAPDMTPKV
EPNVKRKPGPKPAPKPGSKPGATPGSKPVAKPRPRPGPKPSIKTVLKPSPKLGTKPGQKP
VPSEPEISPKIEITFKQKPGPKPGLKAGPKPISKPGPKPGLKPGPKPVPKPADVLSSTDA
TPLKASVGRPRGSNSKTKLENQEDASQHFTELQSKGRKSLKVTIPQKNQDVKSTEQHEKQ
AHPELKVPEKESKNMVLRSRKPSQEKVSKEKEKVAEEEIHTQTLTEIKVSDVTPKAEEVL
AVEQNLSPNAVKQTDIPENSPASPALPVQSKESKGKTLPPLKRKCGSDVSITPVKKKRGP
KPKSKTAPPQPALHEQVVPTPEDKSARGPKRRRGQPKKASVVESMIKDTPSTISGTNISD
VQVVTPQCPTKTKVLPPRKGRGQKYEAMVQKITSPSLKKHLPATQQDSNLSDDVTTKALS
EFVLKEGETSTQLSNTETIESIKEGVKQHEGPVKREMSQEREKHEVRQNVSALEGEGVGA
EDEVEHKSDTSLETIKTEAKQDVVDDKVCTLMETQLEVGTPVERTQQASESVSTADTKSA
RTKRKRWAMVESTDASVVALEADSLIITTPRLAKQRAIKNNHEMHLKQRRKKRKGEAPLE
KTETVEEPNNETVEKQENFEEKVTATEPTALLPISQDEIIEPPLVVSTELIQKPRRGRKP
SVNPSKRKRGKTSTEPIPGKRVKVHKKPGPKPGMKDAIEVIEAVVRAAGCEQAEKEEREK
EEMEKRENETVDKEETSIVGPVVTVTEKQTEVISVKRIRRKPAHQYSNSFCPYVRINNSR
NFSSWCAIVNKPEDAVVFQRRRKKGILRMRNPFTVAKVVPHAAAMLLGPMLNTNLIGRCL
TCCLCGKPANYKDLGDLCGPYYSEESIPRKALTVTHTQSDKTSRDDGSTPEAPGTSSNSE
DAEKKGTAEASSQEAGSSRHHHWHYRRPERPERPERLCQEGRPRRLTLRERFRKMKQLRT
VGTGDPGDQEGNESKFQRLQMEAEAKEHWAHENCAIWTKGIIMVSGRLYGLKEAANKSAQ
MSCYKCQIVGASLSCCWRGCSYKYHYVCAKEIGCTFHEDDFSIKCPKHEDL
NT seq
6636 nt
NT seq
+upstream
nt +downstream
nt
atgcagtccttccgtgagcgcagcagtggttaccacagcaaccaaccctgctaccagcag
gagccccatgaattatctcggctggagacctaccggcaacacccacatcatccccacccc
cagcacccgcacccaggccctggtccgcatcccggcccgggtccagggcagagcaggtcg
ggctatgaggctcataccttggcaagctcggctagcatgcctccagccggtggagcggga
attggaggaggacccaaagactgttacggccagcaaaactacactggttaccaaggaaat
agtggaggaaatgggaatggaaatgggggctcaacagcctctcagacaaaaaagactttc
agaggaagcaaagtacccccaccgaacccaactcagcacttgcagagtcctgggggctac
agtaaccacatgggccctgggtcttattcagcccagtatatgagtgagggacacctccag
cagaagtgggaggacccagcccagttagcacagtatgaccaggaaattgtgggacgtttg
gaggctagtgccacgcctgcacctagctcctcccagtttgtggactcaaacatgcttgga
cactctcaaacccagtgccaccagccttcaaccccaaactatacaagcccccatcaccag
ccccaccctcctaaccctgccccctcacctctcatgtatccccagagccacttacactac
ccccagcactccccctctccatcatcatatatggaaaagtgcagtcctatgccccattgt
tataaaggttataacatgcctccaaattctcagtatgccaggcagatgagtagccacagc
agtttgaagcagggggcctataggtctcctcaaaacagttacgggtaccagcagtcaaat
ccaagagggtatgagcaacagccccctttacaggcaatggccaatccccaagaaccccac
cctaaatatcaacactacaaccaaccccaacaaaactactgtctctcagagctgcctgtc
agatctccagaacaatattatcaaacttgtagcccctcctcaagccactcccctgcacgc
tctgtagggcgctccccctcgtatagttccaccccttcacctctaatgactaatcctgag
tcattccagtatggccagccacccatgacgcctggggcagcctcctcttcttcatcctct
tcagctgggatgcaagaacaagccagtgccaacacaatgttgatgcccccacggtcacac
ccttcacccaacattccccacgcaacccctcacagctactcaacgacaccacaagtaccc
accatgaaagaacgattctcagagaagctgctgtcaaaccccagcttgtggagtctgaat
gcgctcacctctcaagtggaaaacatctccaataatgtccagcaactgctgctttcagag
gcgttagttgcaaacaagaaaggcggtaagcggagcagcggtgggagcaacagcagtggt
ggaagtggagcatcctccaaaaagggagaagaatacaaaagtcctccatatccagatggt
tgtggtaatgtaggtggggggcccatacaagacccttacgctaccccacagcaccagtct
ctgcccatggaactccatgagggtggttactctagcagtagtgatgaaccactagacagg
gggtactattactttggccagggcagaagtccggcccaggctcataacaatgcacaactt
agtctggacacagcctcctcttgctccattgcatctccagatgatatgtccaccaggtct
ggggactcaggtctgcacaaccttacccctgatcctactagatgtcagatggggcagggg
ggggatggcatgagtactccagcgaagagcattggtgacgaaacatctccaacaagcatt
acagttccaagtcctatgaagcaagaaagagattctcctgcagatatacaacatatcaat
cagcctgttaaagaaaattttgaagagtcagcgtggacagaaaaatcagctgaaaaggac
aaggtaacaactgcaaaaactcctgactctgtgagagattcagacacagctaaccctaca
gaaaggcaggagaaatggtcagatgaagaaaaatctccttacagtaaagtaagcacagag
atggcagaaaaaagctattgctatgcggaaacaacatatcaagacgttcagggtaaatat
gactctgatgcgagagattctgttgaacagtccccagcagctctctccgattctagcaac
aaagaccactttggtcaagagataaaatcagaggcattcaaatcagaatctccaactgca
tctgagagctctgtaaaaacgttgcctttcacttcaaggggagaccttgagcaggatcaa
tatttcacagagaaagaggagagctcagagaacacctctccaacccccgaagttgaagtc
ttggaagacagtagttcagacaaaagagagagcagagatcaggagaatgaggaagagggc
gaagacgaggaaagaggaaaagagatcattgaggaggagcagtgtgatatacaaaaaaca
acaacttctctttcccctctttctattggtgaggttgaagaggaacaaaaagaagaggag
atagaaaaccagtcattgactcaagagcacataagtagtagcgatagccaagagaattat
tcaggaaatgtcagcagcaagacagagtgtcagaactctatgctcaatactgacaacgac
tttgcgggggcacctggacatctaaatgctgcagcagcaactacagctgcagatgccttt
tctagggagtctgccattggtgacacagcccctcagtctcagtctgctacaccaatcttc
tctgctctcaatgacaagacagcaccgccaggtcagattagggatcatattgatcatggc
gatgctaaagtgctagaaccagactctcctcagctgccaggaaagtcaatactcccctca
gccccatcctgggcagatactccaccttctcccaaaaaaggtgatgaggatatggaacca
ggcatcagctgtgccagtgctgtgaccccactggccaaaccagagcctgtggccccatct
gctcagccaagggcatttggacgtaagcatgccaggggtagaaggagaatagtgcattca
ggtgtaggaatacaacggcagctaagcttggaaagagaaggagaaaaggaggaggaaagc
acaaactctcctacacaaaaaacacgcatgccaccaatcaaaactgttttattctcagat
caaacaaacttagcacatcaggaacctattgtgagcccgactcccaaaatgtcgacagat
gcttttcaatcaagaatgtgcacccgatcattcaatgcaccagatatgacacccaaagtt
gaacctaatgtgaaaagaaaaccaggtccaaaaccagctcctaagcctgggtcaaaacct
ggtgcaacacctggatcaaaacctgtagcaaaaccaaggccaagaccaggacctaaacct
agcataaagactgttttaaaaccaagtccaaaacttgggacaaaaccaggacaaaaacca
gtgccaagtgagccagaaatctcccccaaaattgaaattacttttaaacaaaagccagga
cccaaaccaggcttaaaagctggaccaaaacccatatcaaaacctggtccaaaaccaggc
ctaaaaccaggtcctaagcctgtacctaaacctgcagatgttttgtcctcaacggatgct
acacccctcaaggcctcagtgggtcgccctagaggttcaaattccaaaactaagttagaa
aaccaagaagacgcaagtcaacatttcacagaactgcaaagcaaaggcaggaagagccta
aaagttacaataccccaaaagaaccaggatgtaaagtcaacagaacaacatgaaaaacaa
gcacacccagaattaaaggtacccgaaaaagaaagtaagaacatggtcttgagatccagg
aagccctcacaagaaaaggtatctaaagagaaagagaaagtcgctgaagaggaaattcat
acccagacacttacagaaattaaagtcagtgatgttacgccaaaagcagaagaggtttta
gctgtggagcaaaatcttagccccaatgcagtcaaacaaactgatattcctgaaaactca
cctgcatcacctgcactgccagtccagtcaaaagaatctaagggtaaaacactccctcca
ctaaagaggaaatgtggctcagacgtttcaataacaccagtaaagaaaaagaggggtcca
aagccaaaatcaaaaacagcaccacctcagcctgccttgcacgaacaggttgtccccaca
cctgaagataagagtgcccgaggtcccaaaagaagaagaggacaacccaagaaagcttct
gtggtcgagtccatgatcaaagacactccttcaactatcagtggaactaacatcagcgat
gtgcaagtggtgacccctcagtgccccaccaaaacaaaagttctcccgcctcgcaaaggc
agagggcagaaatatgaggccatggtacagaagattacatctcctagcctgaagaaacac
ctcccagctactcaacaggacagcaatctaagtgacgatgtgacaactaaggctttgtct
gaatttgtgttaaaggaaggtgagacttctacacaattaagcaacactgagacaatagag
tcaataaaagaaggagtgaaacagcatgaggggccagtcaaaagagagatgtcgcaagaa
agggaaaagcacgaggtgaggcaaaatgtgtcagcactggagggggaaggagtgggggca
gaagatgaggttgaacataagagtgatacaagtctggaaactattaaaacagaagccaag
caggatgttgtagatgacaaggtttgtactttaatggagacacaattagaagttgggact
ccagttgagaggacacaacaggcatcagagagtgtatcgactgctgacaccaagtctgcc
agaactaaaagaaagagatgggcaatggtggagagtacagatgcctcagtagtagcctta
gaagcagatagtctaataattacaacaccaaggcttgccaaacagagggccattaaaaat
aaccatgaaatgcacctaaaacagagacggaagaaaagaaaaggcgaggcccctttagag
aaaacggagaccgtggaagagccaaacaatgaaacagtagaaaagcaggaaaattttgaa
gaaaaggtgacggccacagagcccacagcactgctgccaattagccaggatgagatcata
gaaccccccctggttgtcagtacagagctcattcaaaaacctcgaagaggccgaaaacca
tcagtaaacccaagcaaaaggaaaagaggtaaaacctcaacagagccgattcccggcaag
cgagtcaaggtccacaaaaagcctgggcccaaacctgggatgaaagatgccattgaggta
attgaggcagttgtaagggcagctggatgtgaacaggccgaaaaagaggagagagaaaaa
gaggaaatggaaaaaagggaaaatgagactgtagataaagaggagacatccatcgtgggt
cctgtagtgactgttacagaaaaacaaaccgaggtcatttctgttaaaagaatcagacgc
aaaccagcccatcaatattcaaattctttttgtccctatgtacggattaacaactccaga
aacttttcctcttggtgtgccatagtcaacaaacctgaggatgctgtggtatttcagaga
cgcagaaaaaagggcatactcagaatgaggaaccctttcacagtggcaaaggtggtgcca
cacgctgctgccatgctgctgggacccatgctaaacaccaatctaattggtaggtgtctt
acatgttgcctgtgtggaaaaccagctaattataaagacctgggtgatttgtgcggaccc
tactactcagaggagagcattccacggaaagctttgactgtcacacacacacagtcggac
aagaccagcagagatgatggaagcacgcctgaagcgccaggcacctcgtcaaatagcgaa
gacgcagaaaagaaggggactgcagaagcttcctctcaggaggcaggcagcagcaggcac
caccactggcactaccgacggccagaaaggccagaaaggccagaaaggctgtgtcaggag
ggtcgtccacgaagattaactcttagagagcggttcagaaaaatgaagcagctccggaca
gtcggcacaggagacccaggggaccaagagggcaatgaaagcaagttccaaaggctacaa
atggaggcagaggctaaggaacactgggctcatgaaaattgtgccatctggaccaaggga
ataattatggtatctgggaggctgtatggactgaaggaggctgccaacaagtcagcccaa
atgagctgctacaagtgccagattgtgggggcgtccctcagctgctgttggagaggctgc
tcttataaataccactatgtctgcgccaaagagataggctgcacattccatgaggatgat
ttttccatcaaatgtccaaaacatgaggatctgtaa
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