Kryptolebias marmoratus (mangrove rivulus): 108239312
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Entry
108239312 CDS
T05608
Symbol
rhot1a
Name
(RefSeq) mitochondrial Rho GTPase 1-A isoform X2
KO
K07870
mitochondrial Rho GTPase 1 [EC:3.6.5.-]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
108239312 (rhot1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
kmr03029
]
108239312 (rhot1a)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
kmr04031
]
108239312 (rhot1a)
Mitochondrial biogenesis [BR:
kmr03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
108239312 (rhot1a)
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
108239312 (rhot1a)
GTP-binding proteins [BR:
kmr04031
]
Small (monomeric) G-proteins
Rho Family
Miro
108239312 (rhot1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF_assoc_2
EF_assoc_1
Ras
Roc
SRPRB
EF-hand_6
EF-hand_1
EF-hand_7
Arf
MMR_HSR1
RsgA_GTPase
EF-hand_8
AAA
DUF5096
AAA_22
AAA_25
Motif
Other DBs
NCBI-GeneID:
108239312
NCBI-ProteinID:
XP_017277442
UniProt:
A0A3Q3BGJ6
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All DBs
Position
LG12:complement(12339569..12356687)
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AA seq
619 aa
AA seq
DB search
MRKDVRILLVGEPKVGKTSLIMSLVSEEFPDEVPLRAEEITIPADVTPERVPTHIVDYSE
AEQSEEQLFQEISKANVICIVYSVNNKKSIEKVTSHWIPLINDRIDKDSRVPLILVGNKS
DLVEHSSMETILPIMNQYQDIETCVECSAKNLKNISELFYYAQKAVLHPTGPLYCPEEKE
LKPSCVKALTRIFKVSDLDNDGILNDNELNFFQRTCFNTPLAPQALEDVKNVVRRNMADG
VKDNGLTLKGFLFLHTLFIQRGRHETTWTVLRKFGYDDDLELTQEYLFPMVKIPPDCTTE
LNHNAYLFLQSVFDKHDKDRDCALSPEEVKDLFKVFPYMPWGPDVNNTVCTNDKDWITYQ
GYLSQWTLTTYLDVQRSLEYLGYLGYSIIYEQESQAAAITVTRNKRIDLQKKQTQRSVFR
CNVLGARDSGKSGFLQAFLGRNLQRQRRIREDHKSFYAINTTYVYGQEKYLLLHEVMPDM
DFLSETDLTCDVVCLVYDVNNPRSFEYCAKVYKQYFIDSKTPCVVIAAKSDLHEVRQHHS
LSPHDFCRKHKLHPPQPFTCNTTEAPSKDLYTRLTTMAMYPHMAQADLKNSTFWLRASVG
ATVFAVLGFAMYRALLKQR
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaggacgtgaggatactgctcgtcggggaacccaaagtggggaagacgtcattg
atcatgtctctggtcagtgaggagtttcctgatgaggttcctcttagagccgaggagata
actattccagctgatgtcaccccggagagggtgcccacacacatcgtggactactcagaa
gcagaacagtcagaagagcagctatttcaagaaatctccaaggcaaacgttatctgcata
gtttattcagttaacaacaagaagtcgattgaaaaggtgacgagccactggattcctctt
ataaacgacagaatagataaggatagcagggtgccgctgattcttgtgggaaacaagtct
gacctggtggaacacagcagcatggagaccatcctgcccatcatgaaccagtaccaggac
atagagacctgtgtagagtgttctgccaaaaacctgaagaacatctctgagctcttctac
tacgcccagaaggctgttctccacccgacaggacccctgtactgcccggaggagaaggag
ctgaaaccctcctgcgttaaggctttaacgagaatattcaaagtgtctgacctggacaat
gatggtatcctcaatgacaacgagctcaacttcttccagagaacatgtttcaatacaccg
ctggcaccccaggccttagaggatgtgaagaatgtggtcaggaggaacatggccgacggc
gtaaaggacaacggactcacacttaaaggctttctgttcctgcacacgctcttcatacag
cgaggtcgacacgagaccacgtggacggtgctgcggaagtttggttacgacgacgacctg
gagctcacgcaggagtacctgttccccatggtaaagatccctcccgactgcaccactgag
ctgaaccacaacgcttacctctttctccagagcgtcttcgacaaacatgacaaagacaga
gactgtgcgttgtcaccggaggaggtgaaggacttgttcaaagtgtttccctacatgccc
tggggtccagatgtcaacaacacggtgtgcactaatgacaaggattggatcacataccag
ggatacctctcccagtggacgttaacaacatatttggatgtgcagcggagtctggagtat
ttgggttacctcggctactctatcatctatgagcaggagtctcaagctgctgctataaca
gtgacccgtaacaagcgcatcgatctgcagaagaaacagactcagcgcagcgtctttcgt
tgcaacgtgttgggcgcccgagacagcgggaaaagcggcttccttcaagctttcctgggc
aggaacctgcagcgacagagacggatcagagaagaccacaagtccttctacgccattaat
accacctacgtttacggtcaggagaagtacctgctgctccatgaggtgatgccagatatg
gacttcctgtctgaaacggacctgacctgtgacgtggtctgcctggtgtacgacgtcaac
aacccccgctcgtttgaatactgtgctaaagtatacaagcaatacttcatagacagcaag
acgccctgtgtggtgattgcagccaagtcagacctgcacgaagtgcggcagcaccacagc
ctgtcgccgcacgacttctgccgcaagcacaagctccacccacctcagccgttcacgtgc
aacacgacggaagcgcccagcaaagacctctacaccagacttaccaccatggccatgtat
ccgcacatggcgcaggcggacctgaagaactccaccttctggttgagggccagcgtcggc
gccacggtgttcgccgtgttgggcttcgccatgtacagagcacttctcaagcagcggtga
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