Kryptolebias marmoratus (mangrove rivulus): 108239325
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Entry
108239325 CDS
T05608
Symbol
srebf1
Name
(RefSeq) sterol regulatory element-binding protein 1
KO
K07197
sterol regulatory element-binding transcription factor 1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
108239325 (srebf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kmr03000
]
108239325 (srebf1)
04131 Membrane trafficking [BR:
kmr04131
]
108239325 (srebf1)
Transcription factors [BR:
kmr03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
108239325 (srebf1)
Membrane trafficking [BR:
kmr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
108239325 (srebf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
108239325 (srebf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
SHNi-TPR
ZapB
Motif
Other DBs
NCBI-GeneID:
108239325
NCBI-ProteinID:
XP_017277465
UniProt:
A0A3Q3BNN1
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All DBs
Position
LG12:11585687..11599025
Genome browser
AA seq
1169 aa
AA seq
DB search
MNRLSFDDPSLDNLDPTLSLHDPSDIDTALLSDIDDMLQLINNQDMEFGGLFDPSPFSGG
PPTQEITGLSQTITSAAPPATTTTPSPSSASSILSSNPHLDALLGPPITRSSTTPDKAFR
PLTFQQSPLSHVASSPPRQQPPSTPQPQSLRQPQVEQPQPSFSPSAPVQAASPHGSPNPA
FSSTTQTVFISAAPPTPPQPQPQTPPQAQSNYKSQTSYTAGSPIGGSTPSSSSPPSVQTQ
LQGLTTTAPLLATTASPPVQTIAPQVQQVPVLLQPQFIKAESLLLTTLKPDTCMVTTVAS
PTSLATTTQVQSTSLQAFMGGSTILTTLPVMMDSEKLPINRIAIAGKPMGQPPKGEKRTA
HNAIEKRYRSSINDKIIELKDMVAGTEAKLNKSAVLRKAIDYIRYLQQANQKLKQENMAL
KMAAQKNKSLKDLVAMEVDGQTEVKNELPTPPASDVGSPTSFSHCGSDSEPDSPMGEDTK
PSIGVLDQSAAGAGVSGMLDRSRMALCAFTFLFLSMNPLAALLCSSGGSSAGNPADITTH
HTSRSVLGVDVAAESWGWMDWMLPTILVWLLNGILVSGVLIRLLVYGEPVTRPHSGSSVL
FWRHRKQADLDLARGDFAQASHNLRTCLKALGRPLPTSQLDLACAALWSLLRFCLQRLWV
GRWLAAKAGGLRSDRPLQEDACKSSRDAALVYHRLHQLHMTGKLNGSHLSAVHMALSAVN
LAECAGSCLPVASLAEVYVSAALRVKASLPRILHFTSRVFLSSARQACLSSSGSVPPAMQ
WLCHPLGHRFFVDGDWAIRSTPKESIYSQAGNTVDPLAQVTQAFREHLLEKALYCVAQPH
GEKSPSQGEGEYADALEYLQLLISASDAAGATSQSFAICSNMATVTGCDPHSKWWSSVAI
VIINWLQGDDAAAERLYPTVEHLPRSLQNAENLLPKACLNTFRAVRALLCKPENCQLSLS
YTDKASVLLRDSLNMGPHCHSSSLDKVVELLVCDLLLVLRTNIWHVQQQGPASPTGPVSV
GTTGPASLHQASPPELQGFQQDLSSLRKLAQSFRPAMRRLFLHEATARLMAGASPTRTHQ
LLDRSLRRRATPGAKTEEFEARPGQREQAEAVMLACRYLPPSFLSAPGQRVGMLADAART
LEKLGDKRTLHDCQQMIIKLGSGTTVTNS
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcttgtcttttgacgatccctcgctggataacctggatccgacgctgtcgctc
cacgacccgagtgatattgacacggccctgctgagcgacattgatgacatgcttcagctc
atcaataaccaggacatggagtttggtggactctttgatcccagtcctttttcaggaggc
cctcccacccaagaaattactggcttgtcgcagaccatcacctctgctgctcctccagct
accaccacaacgccttcgccctcgtctgcttcttccatcctcagcagtaaccctcaccta
gatgctctcttgggccctcccatcacccgtagctccaccaccccagacaaggccttccgg
cctctcacctttcagcagtctcccctctcccacgtagccagctcccccccgaggcagcag
ccgccctcgacgccgcagcctcagagcctcaggcagcctcaggtggagcagccccaaccc
tccttcagtccgtctgcccccgtccaggcggcttctccacacggttcgccaaacccggca
ttcagctccaccacgcagacagtcttcatctccgctgcacctccgactccacctcagccc
cagccacagacgcctccacaggcacagagcaactataagagccaaactagctacacagct
ggcagccccatcggtgggagcacgccctcgtcctcctcgcctcctagtgttcagactcag
ctccaggggttgaccactacggctcccctcctggctacaacagcaagccctccagttcaa
accatcgcaccccaagtgcagcaagtacctgtgctgctgcaaccccagttcatcaaagct
gagtccctgctgctcactactctgaagcctgacacctgtatggtcacaactgtggcctct
cccacatctctggccaccaccacccaagtccagagcacctcactgcaggcctttatgggc
gggagcaccatcctgaccacgctgccggtgatgatggattctgaaaagctgcctatcaac
cgcatcgccattgctggcaagccgatgggccagccaccaaaaggggagaagcgcacagct
cacaacgcaattgagaagcgctaccgctcttctattaatgataaaataatagagctgaaa
gacatggtagcagggactgaagccaagctcaacaagtctgcagtgctgaggaaagccatc
gactacatccgctacctgcagcaggcgaaccagaaactcaaacaggagaacatggctctc
aaaatggccgcacagaaaaacaagtctctgaaggacctggttgccatggaggtggacgga
cagacggaagtgaagaatgagctgcccactccgccagcctctgacgtgggctccccaacc
tccttctcacactgtggcagtgactcagagcctgacagtccgatgggagaggacaccaag
ccaagtattggcgtgctggatcagtctgcagcaggtgccggtgtcagcggcatgttggat
cgttcccgcatggcattgtgtgcttttaccttcctcttcctttccatgaaccccctggct
gctctgctctgctcctctggtggcagctctgcaggaaaccctgcagacatcaccacccat
cacaccagcagaagcgtcctgggtgtggacgttgcagctgagtcctggggttggatggat
tggatgctcccaaccattctggtgtggctgctgaacggtattctggtatcaggagttctg
atccgattgttggtttacggcgaacctgtcaccagaccacactctggctcttctgttttg
ttctggaggcaccgcaaacaggcagacctggaccttgctagaggagatttcgctcaggcc
agccacaacctgcgaacctgcctgaaggctcttggtcgtcccctgcccacctctcagttg
gacctggcctgtgcggcgctctggtctctgctaagattctgcctccagcgcctctgggtc
ggccgctggctcgctgccaaggctggaggtttgcgaagcgatcgccccctgcaggaggac
gcgtgcaaaagcagtcgggacgcggcgctggtttaccaccgtctgcaccagctccacatg
acaggtaaactgaacggtagccacctgtcagcggtccacatggctttaagtgcggtcaac
ctggcagaatgtgctggctcgtgtcttcctgtagcctctctggctgaggtctacgtctct
gcagctctgcgagtcaaagccagtttgccaaggatccttcattttacctctcgagtgttc
ctgagcagcgcccgccaggcgtgcctgtcctccagcggcagcgtgcctccggccatgcag
tggctctgccatcctctcggccaccgcttcttcgtggacggggactgggctattcgcagc
acgcctaaagaaagcatctacagtcaggccggcaacactgtggatcctttggctcaggtg
actcaggcctttcgagaacacctccttgaaaaggctctttattgtgttgcccagcctcac
ggagagaagagtcccagccagggtgaaggggagtatgctgatgccctggagtaccttcag
ctgctcatcagtgcgtcagacgcagccggggccacctcccagtcctttgcaatctgctcc
aacatggctactgtgacgggttgtgacccccactccaagtggtggtcgtcggttgccata
gtgatcatcaactggcttcagggagacgatgccgctgcagagagactttatccgaccgtc
gagcacctgcctcgcagtctgcagaacgcagagaatcttctgcccaaagcgtgtctgaac
acattccgggcagtcagagctctgctgtgcaagccagagaactgccagctgagtctgagc
tacactgacaaggccagcgtcctgctccgagacagcctcaacatgggaccacactgccac
agctccagtttagacaaggttgttgagttgctggtgtgcgatctcctgttggttttgagg
acaaatatctggcacgtgcagcagcaggggccagcgagtcccacagggccggtgtcggtg
ggcaccactggccctgcgagccttcatcaggcctcgccacctgaactccagggctttcag
caagatctcagctccctacgcaagctggcacagagcttcaggcctgccatgcgaaggttg
ttcctccacgaagccacagccaggctgatggcgggagccagtcccaccagaacccatcag
cttctggatcgctcgctgcgacgcagagcaacaccgggagccaagacagaggagtttgag
gcgcggccaggccagcgggagcaggcggaggccgtgatgctggcgtgccgctaccttcct
ccctccttcctgtcagctccgggtcaaagggtgggcatgctggcggatgcggcccgcact
ttggagaagctgggagacaaacggaccctccacgactgccagcagatgatcatcaaactg
ggcagcggcaccaccgtcaccaacagctaa
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