Kryptolebias marmoratus (mangrove rivulus): 108239387
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Entry
108239387 CDS
T05608
Symbol
cftr
Name
(RefSeq) cystic fibrosis transmembrane conductance regulator
KO
K05031
cystic fibrosis transmembrane conductance regulator [EC:
5.6.1.6
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr02010
ABC transporters
kmr04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108239387 (cftr)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
108239387 (cftr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
kmr02000
]
108239387 (cftr)
Enzymes [BR:
kmr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.6 channel-conductance-controlling ATPase
108239387 (cftr)
Transporters [BR:
kmr02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC7 subgroup
108239387 (cftr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFTR_R
ABC_membrane
ABC_tran
AAA_16
AAA_21
AAA_29
SMC_N
DUF87
RsgA_GTPase
MMR_HSR1
nSTAND3
T2SSE
FtsK_SpoIIIE
AAA_30
Dynamin_N
Zeta_toxin
NTPase_1
MeaB
AAA_23
nSTAND1
Motif
Other DBs
NCBI-GeneID:
108239387
NCBI-ProteinID:
XP_037836554
LinkDB
All DBs
Position
LG17:179377..247001
Genome browser
AA seq
1503 aa
AA seq
DB search
MQKSPVEDANFLSKFFFWWISPLLRKGFTKKLELSDVYKAPSFDLADTLSERLEREWDRE
VVSAKRPKLLKALARSFFRPFAFFGILLYFGEASKTVQPQLSGRIIASFDPFHAPERSQG
YYLALGLGLLFTARFILLQPAIFGLHHLGMQIRIALFSLIYKKTLKLSSRVLDKISTGQL
VSLMSAHLNKLDESLGLAHFIWITPLQCILCTGLIWELIEVNGFCALAALTLLGIVQAWL
SMKMGPHRVKRAGLISRRLALTSEIVENIHSVKAYGWEEVMETIIKNIRQDEMTLTRKIG
SLRYFYSASYFFSAILVIISAIVPHALSKGIILRRIFTTASYCIVLRMTLTRQLPGSIQM
WYDTLALVKKIEDFLLKEEYRMLDYNLTAVGLELVNVSASWDEGIVELFEKIKLENKNSA
HLNGDSGLFFTNLYVTPVLRNISLCLEKGTMLAVAGSTGSGKSSLLMMILGELVPSEGKV
RHSGRISYSSQTSWVMPGTIRDNILFGLTYDEYRYTSIIKACQLEEDFALLPEKDKTPLL
EEGVTLSGGQRARICLARAVYKDADLYLLDAPFTHLDIATEKEVFEKCLCKLMASKTRVV
VTSKLDHLKRADRILLLHNGDCYFYGTFSELQAKRPDFSSLLLGIEAYDNITAERRSSIL
TETLRRVSVDETAGFRGTEPIRQSFRHAPPQNHVVGDGYPEKRKQSLILNPLAAARKFSL
IRNSEQANNYQSTTIEDGVHELSERRFSVVPEDDQVEEVLPRNNFYHHGLQHLNGQRRQS
VLQFITNSQGHERREQMQSSFRKKLSITPQCNLASELDIYARRLSKDSVFDISEEVDEED
MEECFADERENIFQTTSWSTYLRYISTNRSLIYVLIFIMIIFVIEVAGSVIGIFLITSKI
WRDGANPNSPNYIDEQHPNASSPPVHLAVIFTPTSAYYIIYIFVAHSDSILALGAFRGLP
LVHTLLTVSKRLHEQMLSAVLRAPMSVLNTMKTGRIMNRFTKDMTIIDDMLPLVLFDLIQ
LTLLVIGCIFTVSIIRPYIFIAAIPLAVIFVVIRKYFLRTGQQLKQLEAEARSPIFSHLI
ISLKGLWTIRAFGRQTYFETLFHKALNTHTATWFHYLSSLRWFLFRCDVLFVLFFTAAAF
IAVGTNQDKPGEIGIIVALAMLILGTFQWAIITSISVDGLMRSVDRVFKFIDLPSEEMLL
GKSGGKGGSDLVINNPQVHNYWPNRGQLDIQGLTVKYTEAGRAVLNNISFSVEGGQSVGL
LGRTGSGKSTLLSALLRLASTEGEMSIDGISSSSIPLQTWRKAFGVVPQKVFILTGSFRM
NLDPYGRYSDEELWRVAEEVGLKSVIEQFPDKLDFQLEDGGSVLSNGHKQLMCLARSILS
KARILLLDEPSAYLDSITLQVLRKTLKQSFSGCTVILSEHKVEPLLDCQSFLMIENSSLK
SYDSIQKLMNEVSHLKQAMSPADRLRLFPALHRLNSTKRAPPPAAKISSLLEEAEDEVQD
TRL
NT seq
4512 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaatcaccggtggaagatgccaacttcctctccaagtttttcttttggtggata
tccccactgctgaggaagggcttcactaagaagctggagctgagtgacgtgtacaaggct
ccatcttttgatcttgcagacaccctctctgagaggcttgaaagagaatgggacagagag
gtggtgtcagccaagaggcccaagctcttaaaggcacttgccagaagcttctttcgcccc
ttcgccttttttggcatcctactctactttggggaagcatccaagactgtgcagcctcaa
ctttcaggtcgcatcattgcttcctttgacccattccatgctcctgagcggagtcaggga
tactacctggcccttggcctcggcctcctcttcaccgctcgcttcatcctgttgcagccc
gccatcttcggcctgcatcacctaggcatgcagatccgcatagctcttttcagtctcatt
tacaagaagaccctgaagctgtccagtcgagtcttggacaagatcagcactggtcagctt
gtcagcctgatgtctgcccacctcaacaagcttgatgagagcctgggtctagcacacttt
atctggatcacccctctgcagtgtatcctgtgtactggtttgatctgggagctgatcgag
gtgaatggtttctgtgctctagcagctctgactctgctgggcatcgtccaggcctggctc
tccatgaagatgggacctcaccgggttaagcgagcaggactgatcagtcgccgcctggct
ctgacctcagagattgtggagaacattcactctgtaaaagcgtatggctgggaggaggtg
atggagaccattattaagaacatcagacaggatgaaatgacgctgacaaggaagattggg
tctctgcggtatttctacagtgcctcgtacttcttctctgccatcttagttatcatctca
gccattgtgccacatgcactcagcaaaggcattattctgcgtcgtattttcaccacagcc
tcctactgcatagtgctacgtatgacacttacccgccagctaccaggatccatccaaatg
tggtacgacacgctggcactagtcaaaaagattgaggatttcttgttgaaggaagaatac
agaatgctggattacaacctgaccgctgttggactggagcttgtcaatgtgtctgcatcc
tgggatgaggggattgttgagctctttgagaagatcaagctggagaacaaaaacagcgca
cacctgaacggagacagcggactcttttttaccaacttgtacgttacacctgtcctcaga
aacatcagcctgtgcctggaaaaaggcacgatgcttgcagtggctggatctactggctca
ggaaagagttccctgctcatgatgatcctgggagagttggtcccatcagagggtaaagtc
agacacagcgggcggatttcttattcatcacagacttcgtgggtcatgccagggaccatt
cgtgacaacatcttgtttggtttgacctacgacgaataccgctacacctctattatcaag
gcctgccagcttgaagaggactttgccttgctgcctgaaaaagacaagacacctctcctt
gaagaaggagtgaccctcagtggtggtcagagagcgaggatttgtcttgccagggcggtg
tataaagatgcagatctctacctgctcgatgcacctttcactcacctggacattgcgaca
gagaaagaggtctttgaaaaatgtctctgtaaactcatggcctccaagactcgtgttgtg
gtcaccagcaagttggatcatctcaaacgtgctgacagaattcttctgctgcacaacgga
gactgttacttctacggcacattctcagagctgcaggcgaagcgcccggacttcagctcc
ctcctgcttggaattgaggcctatgacaacataaccgcagagcgacgcagctccatcctc
acagaaactcttcgcagggtttcagttgatgaaactgctggtttccgtggcacagagccc
attcgccagtcattccgccatgcacctcctcaaaaccatgttgtgggggacggctaccct
gaaaaacgcaaacagtcgcttatccttaaccctctagcagctgctcgaaaattttcatta
atcagaaactccgaacaggcaaacaattatcagtccacaacaatagaggatggggttcac
gaactttcagagaggagattctctgtagttcctgaagacgaccaagtagaggaggtgctt
ccgagaaataacttctaccaccatgggttacagcacctgaatggtcagcggcgccagtct
gtcttgcagttcatcaccaactctcagggccatgagcgtagagagcagatgcagtcgtcc
tttcgaaaaaagctgtccatcacacctcagtgtaacctggcatctgagctggacatctat
gcccgccgcctgtctaaggacagcgtttttgacattagcgaggaagtagatgaagaagac
atggaggaatgctttgcagatgagcgggagaacatctttcaaacgacctcatggagtact
tacctgcgctatatttccaccaataggagcctaatctatgttctaatttttattatgatt
atttttgtcattgaggtggctggttcagtcattggcattttcctcatcacctctaagatc
tggagggatggtgccaacccaaactcacccaactacattgatgaacagcatcccaatgca
tcatcaccccctgttcacctggcagtcattttcactccaaccagtgcttactacatcatc
tacatttttgtggctcattcggacagcatactggccttgggagccttcaggggtcttcca
ttggttcacacattgctcactgtctccaaaagactgcatgaacagatgcttagtgctgta
ctacgagcccccatgtctgtgctcaacaccatgaaaacaggtcggataatgaacagattc
accaaggacatgaccattatagatgacatgctgcctctggtgctttttgacctcatacag
ctgaccttactcgtcattgggtgcatcttcactgtttccatcattcggccatacatcttc
attgctgccatcccactggctgttatctttgtggtcatcaggaagtacttcctacgaact
ggacagcaactcaaacaactagaggctgaagctcgtagccctatattctctcacctcatc
atctcactgaagggtttatggacgattcgtgcatttggtcgccagacctactttgagaca
ctcttccacaaagccctgaacactcacactgccacgtggttccactacttgtcctcactg
aggtggttcctctttcgttgcgacgtgctctttgtgttgttcttcactgccgctgccttc
attgccgtgggaaccaaccaggacaaacctggggagattggcattatcgtggcactggca
atgctcatccttggcaccttccaatgggctatcatcaccagtatcagcgtggacggactg
atgcgttcagtggatcgagtgttcaaattcatcgacctgccatcagaggagatgctgctg
ggaaaatcaggagggaaaggtggatctgaccttgtcatcaacaacccccaagtgcacaac
tactggcccaaccgcggccagttagacatccaaggcctcactgttaaatacacagaagct
gggcgagccgtgctaaacaacatctccttctctgtggagggggggcagagcgtgggtctg
ctgggtcgaacaggctcaggaaagagtaccctgctgtctgccctgctgcggctcgcttcc
actgaaggagaaatgtctattgatggtatttcttccagctccattcccctgcagacttgg
aggaaggcctttggagtggtcccgcagaaagtatttatcttgactggatctttccggatg
aacctggacccgtatggtcgttacagtgatgaggagctatggagggtcgctgaggaggtt
ggtttgaagtcagtcatcgagcagtttcctgataagctggactttcagcttgaagatgga
ggcagcgttctgagcaatggacacaaacagctcatgtgtctcgcccgctccatcctcagc
aaggcccggatccttctcctggatgagccctctgcttacctcgactccataaccttgcag
gtgctgaggaagacactaaagcaatctttttctggctgcaccgtcatcctatcagaacac
aaggtggagccactgctggactgtcagtcattcctgatgatcgagaacagctccttgaaa
agctacgactccattcagaaactcatgaatgaggtgagtcacctgaaacaggccatgagc
cctgctgaccggctccgtctcttcccagcgcttcaccgcctgaactcaaccaagagggca
ccgccgccagctgccaagatctcatccctgttagaagaagctgaggatgaggtccaggac
actcgactctaa
DBGET
integrated database retrieval system
