Kryptolebias marmoratus (mangrove rivulus): 108239411
Help
Entry
108239411 CDS
T05608
Symbol
prpf38b
Name
(RefSeq) pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108239411 (prpf38b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
kmr03041
]
108239411 (prpf38b)
Spliceosome [BR:
kmr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
108239411 (prpf38b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
108239411
NCBI-ProteinID:
XP_017277594
UniProt:
A0A3Q2ZU40
LinkDB
All DBs
Position
LG20:complement(13362048..13366430)
Genome browser
AA seq
471 aa
AA seq
DB search
MANVGNQLPTQAVAKPGKHGNVLPLWGNEKTMNLNPMILTNVLSSPYFKVQLYELKTYHE
VVDEIYFKVTHIEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTRKQ
LMGLITHTDSPYIRALGFMYIRYTQPPTDLLEWYDGFLDDEEELDVKAGGGCVMNIGEML
RSFLTKLEWFSTLFPRIPVPVQKQIDQHMKARPRKVAQKEPEEETAYAESGKQGERRHSR
TPRRSPSPRRSPKRSRSRSHHRERDRRGPSFDCELERERDRQKKEKEREGRDRDRDRGDR
GDRGDRDRRRSRSADRNQERRERKRSRSGSKERRSERREKERDGGEDRSRRKERDHHKDK
DRGTERDRSRERKNRGEADERRHKDDRDRHREDRKSKRSSRSRSRERKHKSGGEEKSRKR
ERSHSRERDRERDGEQRSHKRSGSKERNRHQRDSSNEHSKHSDRRRSQSTE
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggctaacgtcgggaaccagttaccaacacaggccgttgccaagcctgggaaacatgga
aacgtactgcccctgtggggcaacgaaaagactatgaacctgaacccaatgattctcacc
aatgtactgtcctcgccgtatttcaaagttcagctctacgaattaaaaacttaccatgaa
gtcgtggacgaaatttatttcaaggtgactcacattgagccctgggaaaaaggaagcaga
aagactgcaggtcagacaggaatgtgcggaggggtgcgtggcgttgggaccggtgggatt
gtttctactgctttctgtcttctttacaaactgttcaccctgaagctgacacgcaaacag
ctgatgggtctgatcactcacacagactctccgtacatcagagcactcggattcatgtat
ataagatacactcagcctccgacagatttattagagtggtacgatggcttcctggatgat
gaggaggagctggacgtaaaagcaggaggtggctgtgtgatgaacatcggggagatgctg
cgctcgttcctgaccaaactggaatggttctccactctgttccctcggatcccagtgcct
gtacaaaagcagatcgatcagcacatgaaggcaaggccacgtaaggtggctcagaaagag
cccgaggaggagaccgcttacgcagagtcggggaaacaaggagagcgacgccactccagg
accccgagacgatcgccaagccccagaaggtcgcccaaacggtcaagaagcaggagccac
caccgtgagagagaccgccgcggcccgagctttgactgcgagctggagcgagagcgtgac
cgccagaagaaggagaaggagagggaggggagggaccgagacagggacaggggggaccgg
ggagacagaggggacagggacaggcggagatcccgtagtgcagacaggaaccaggagcgg
cgagaacgcaaaagaagtcgcagtggcagcaaggagcggcggagcgaacgcagggagaag
gaaagagacggaggggaggacaggagcaggaggaaggaacgggatcaccataaggataag
gacagagggacggagagggacaggtccagggagaggaagaacaggggagaggctgatgag
cgaaggcacaaagacgacagggacagacacagggaagacaggaagtccaaacggtccagc
cggagccgcagcagagaaaggaagcataagagcgggggagaggagaagagcaggaagagg
gagcgcagccacagcagggagagggaccgagagcgcgacggagaacagaggtcccacaag
cgcagcggcagcaaagagaggaaccgccatcagcgagactccagtaatgaacatagtaag
catagtgaccgcagaaggagtcagagcactgagtaa
DBGET
integrated database retrieval system
