Kryptolebias marmoratus (mangrove rivulus): 108239494
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Entry
108239494 CDS
T05608
Name
(RefSeq) dynein, cytoplasmic 1, intermediate chain 2a-like isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04145
Phagosome
kmr04814
Motor proteins
kmr05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108239494
09142 Cell motility
04814 Motor proteins
108239494
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108239494
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
kmr03036
]
108239494
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
kmr04812
]
108239494
Chromosome and associated proteins [BR:
kmr03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
108239494
Cytoskeleton proteins [BR:
kmr04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
108239494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
Dynein_IC2
WD40_WDHD1_1st
Beta-prop_EML
WDR55
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Beta-prop_WDR19_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Nbas_N
Beta-prop_SPT8
ANAPC4_WD40
Beta-prop_IP5PC_F
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
108239494
NCBI-ProteinID:
XP_017277716
LinkDB
All DBs
Position
LG20:complement(14701909..14709108)
Genome browser
AA seq
690 aa
AA seq
DB search
MPDCLFQHHQSAPPSSCPGSQRPQNWTLLSRLCFRLTSDISMSDKSELKAELERKKQRIA
QIREEKKRKEEEKKKKDGDSKRGAEGGSSMGGEDSDLERKRREAEALLQSVGITPDIPHA
QPLRVVTEDTCLFHYLVPAPMSPSNKSVGSDAGSQDSGDGNAGPRTLHWDPDPSTLQLHS
DSELMGRGAVRLGMSKLTQVDFVPRETVSYSKETQTHTEALSHTDQKADEEEDEEIGAPP
PTEDTQEDKDEHGEKQEDDTPKELTEEEKLQVLHSDEFLSFFERGSRIVERALSEQVDVC
FDYSGRDLEDKEGDLQAGAKLVLNRQFADERWTKNRVVTCLDWSPQYPELLVASYNNNED
APHEPDGVALVWNMKYKKATPEYIFHCQSEVMSAGFAKFHPNLVVGGTYSGQIVLWDNRS
NKRTPVQRTPLSAAAHTHPVYCVNVVGTQNANNLISISTDGKMCSWSLDMLSQPQDSLEL
VFKQSKAVAVTSMAFPLGDVNNFVVGSEDGSVYTACRHGSKAGITEMFEGHHGPVTGLSC
HSAAGPVDFSHLFISSSFDWTVKLWSTKSTRPLYSFEDSCDYVYDAMWSPTHPALFACVD
LSGRLDLWNLNNDTEVPTASVCVDGSPALNRVRWSHTGKEIATGDSEGQVQVYDVGEQIC
VPKADEWTRFVRTLAEINENRDEAEELANV
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgcccgactgtctcttccagcatcatcagtccgctcctccatcatcttgtcctgggagt
caacgtccacaaaactggactcttttgtctcgtttgtgctttcgcctcacttctgacatc
agcatgtctgataagagcgaattgaaggccgagctggagaggaagaaacaacgaattgcc
cagattcgagaggagaagaagaggaaagaagaagagaaaaaaaagaaggatggagactca
aagcgcggagctgagggaggctcctcgatgggcggcgaagactctgatctggagaggaag
aggagggaggcggaggctttgctgcagagtgttggcatcaccccagatatacctcacgct
cagcccctgagggtagtaacagaagatacgtgtctgtttcactacctagtccctgccccc
atgtctccctccaacaaatcagtgggcagcgatgcaggaagccaggattctggggatgga
aacgcaggaccaaggactttgcattgggatcccgacccctccactctgcaactccactcc
gactctgagctgatgggacgtggagcggtgagacttggcatgtccaaactgacccaggtg
gactttgtaccgagggaaactgtgtcctactccaaagaaacacagacccacacagaggca
ttgtcacacactgatcaaaaagcagatgaagaagaggatgaggagataggtgctccccca
ccaacagaggacacccaggaggacaaagatgaacatggtgaaaaacaggaagatgacact
cccaaggagctgacagaagaagagaagctacaggtcctgcattccgatgagttcttgtcg
ttttttgagcgcggcagcagaatcgtggagcgagctctgtctgagcaggtggacgtctgc
ttcgactacagtgggagagatctagaggataaggagggtgacttgcaggcgggtgcaaag
ctggttctgaacaggcagtttgcagatgagcgctggactaaaaacagagtggtgacctgt
ctggactggtcgcctcagtatccagagttgttggtggcctcgtacaacaacaacgaggac
gcgccacatgagcctgatggcgtggcgctggtctggaacatgaagtacaagaaggctacg
cctgagtacatcttccattgccagtcagaggtgatgtcagctgggtttgcaaagtttcac
cccaaccttgtggtgggtgggacatactctggacaaatagtcctttgggacaacagaagc
aacaagcgaactccagttcagagaactcccctgtctgcagctgcacacacacaccccgtc
tactgtgtgaatgtggttggaacccaaaacgccaacaacctgatcagcatttccactgat
ggcaagatgtgctcctggagcctcgacatgctctcccagccgcaggacagtctggagctg
gtgttcaaacagagcaaggctgtggctgtaacctccatggcatttcctctgggtgacgtg
aacaactttgtggtgggcagtgaggacggctctgtctatactgcctgtcgccatggcagt
aaggcaggcatcaccgagatgtttgaaggccaccatggtcctgtgaccgggctgagctgt
cacagtgctgcgggacctgttgatttctctcacctctttatctcatcttcgtttgattgg
actgttaaactgtggagcaccaagagcacccgacctttgtactcatttgaggacagttgt
gattacgtctacgatgcgatgtggtctccaacacatcctgctctgtttgcatgcgtggac
ctatccggacgcctggacctgtggaacctcaacaacgatactgaagttcctactgccagc
gtgtgtgtggacgggtctccagcactgaaccgtgtgagatggtctcacactggaaaggag
attgccaccggagactcggagggtcaggttcaggtgtacgacgtgggggagcaaatctgc
gtgcccaaagcagacgagtggacgcgcttcgtcaggacgctggctgagatcaacgagaac
agagacgaggctgaggaactggccaacgtctga
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