Kryptolebias marmoratus (mangrove rivulus): 108239511
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Entry
108239511 CDS
T05608
Name
(RefSeq) nucleoprotein TPR
KO
K09291
nucleoprotein TPR
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108239511
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmr03019
]
108239511
Messenger RNA biogenesis [BR:
kmr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108239511
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
GAS
DUF1664
DUF7310
Motif
Other DBs
NCBI-GeneID:
108239511
NCBI-ProteinID:
XP_024863010
LinkDB
All DBs
Position
LG20:complement(15140665..15167389)
Genome browser
AA seq
2524 aa
AA seq
DB search
MAVVLLQALERTELNKLPKGIQNKLEKFVTELQNANEALKTQHERFKADSEQQYFDIEKR
LAESQEQILSATKDLQVLKEENKKLNEELSTLKGTESEACEEKLLQQQTKTKDEIEAEKR
ELDRLLEKRTQEVENLTDDVKRLNEKLTETNKIKMELQLKLDDIQSSATSVQHREKRMEQ
EKELLDKKMEYLTTELKTKTNELLNTNREKGKEILDLQGSLKSSNEQVARLESQLSSLRE
ISENQNKRAEDLNNKLKQAKDEQCAMEEKYRNELNAHVKLSSLYKGAATDMETKNQELSR
AVEELSKLVKETGEANKSLEKKVSEVEELKTQLKAELEEKIKKMEKELENATMKAAGKRC
CTPSLTEEQLDSMCPSAAAIAAIVKPSMKFFDLYNAFVECQTQLQLEKQETRRVSRVLDE
IVQEVESKAPVLKRQREEYESMQRSMTSLCSKLEQARTEIYSLQKEKDEAKQRSDAIERD
KLRTERLLEDTSDQLCSVLVELEKARGNQVAKDDGSSADISSTSEVISSSQLSFRSVTDL
QRQNQTLLGRLRELEEEKDREQTRVTSARIKELETLVEKLQKEAEQLREQRNQQKTLADS
STRQRDMYKALLTQSTGFSLPPQGQGSAPDRPSAPATRSTPQRATAAESAQTAQTKAALK
QLNDAFTLYKKEKAENDRMLNETNDRLQRELTELRSSRAKLTSQLEFSNKRYEILQETVS
AYRREISALQERNQKMAATAQRHEHIIHTMSQDLRQSNEKLALEEVRVENLTKERDILRQ
AESRLNQEREAMLAEHRNQNLLLSNLKTIQLTMEHSDTQTRQRLNNKIEQLEAELTSMRT
RLQQEVAQRHALGRTSDAKLLETKNQLKTQTTLLQKTKELLRSTEQQLTVLKTQPTSASS
SEAAAASNSTTTPATRAAGLRAPPRVHSPVPAASQQPSQSEQELSEVKNLVRVTKEQNTE
LTDQLKNANARVEQYQSVVLALEESLKKEKELQTPLKDRLKELEEVQKQLEKKILELEKM
KQQEQEERRKAVDAMEKQVCELQRSLKASQAAQQEALERSAAALTQEQKATQESLLQTKL
AGEAQAKYERELMLHAADVEALQQLKKTSQQETTRKRELEEELKKTTALLQEKTTTWNIM
EKQLKEEQSSLSRRCEELGKQNALLHQQMDEMATRSRQLQQQQQQQQNLDLSFSEEGKTT
EQILEILRFVRREKEIAAARNEASEGEALRYKQRVEHQDRQLKELQETLNAEREKMQATA
KTLAEQQEQLKRMETISSLQETNKLLKMDRDKLEQELQQAQAKVTKLQRDIGPLHNSLSI
LSEKNGSLQADKRLLEEDLKRLKARVQQLLSQHKDGDVEEKQKLTAERESQQKRITQLAE
ETAKLKTELARSNASSNSAQSQLQGLKDSVARLTSERDALKKDVETKNNDILEKNRTINQ
VKKIGRRYKTQYEELKAQHDKMVSETAAKAGSETAPNQESQQDLNKVREDLKKTQDELNA
LKEEAQKKQEEAQKSMQELEATQKENQQTKEKLQEVQNQLTQNQNQLTQVQSQLSQTQTQ
LQQNQNQLTQSQKDLQQAKSHTQQVQNQLKSAQSQAQARQNQIQQVQRELQQTKEALQQN
LAKQKELQQTNQASQQSLSQEVNNLKTSLSQAENKVTELQGKVDSLQKTVVEREADNKRL
QEQLNEAKQAHEANQAAQANQNQNQSSPSTQGTDAKAAGDANQALQDELTKLKQELSEIR
SREEQLKQQMAEKEEKMRKAILGAKLKINQVNSAKEQLSQENEELKQNKEELEVRMNALK
SQFEGKCLRLERELKELRETQTHSDQREESPDQSGAKVSDQARSSDQRQISLKSPVQERG
SSSVSEPPTANIRPTQSTPSPSSKPSPSAGSKATPRASIRPMVTPVTVPIATPTATVMPT
TQTESQEALVSSGPSVHSTSSALVNTPTSITQPTSTQATAFVQPTQQQAANQDAGSSMEA
ERPSTSSSMTGAGSKRKADEEEEESRPESSHTPPTTKKLRLKPTIALQMEGEEEIDGELR
DVREQLESPDDSQELPEESFPVLAVDLEEEGISQSVPSDQGSQLSAIIRDVIVIDTDSES
PENQKQEGEEDEEEEEEEEEEEEEEEGRGEEQFKEGGDDDDGADDADAADSGMRGAEESI
EESREAEEERNEAGPSGGTNTEENVSGASSGSQCSSEPTFSGEGSSCLMESETPRDSIHL
PPTCSSTYSPSSSSVTPRLPHTRRPPHALPPRLYIQAPAPELGPPHTQRQSSQLRRPSSG
RGPQLTPGIATMPFFDDDDRMVPSTPTLVVPHRTDGFAEAIHSPQVAGLSTRFRFGPPED
LLQQTSASHSDLGQLASQGGLGMYESPLFLAAHDEDGGGRSVPTTPLQVAAPVTVLTESV
PTDSCDNMASQSVPMVTASSGMAAAADDGDEVFMEQEGDGPGIESSLESQTDMESTGQQS
DDAALPSTSQDPDTSSVTLRRAVTSHPLISSLSGRGPRGGRLLSRRGTFPRGGRGGAMGR
GGIP
NT seq
7575 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcgttttactgcaggctctagagcggacggagctgaacaaacttccgaaaggg
atccaaaacaagcttgagaagtttgtgaccgagctgcagaatgctaatgaggcgctcaag
acgcagcacgagcggttcaaagcagacagtgagcagcagtactttgacattgagaagaga
ctggcagagagtcaggaacagatactttctgccacaaaagacctgcaagtcctgaaagaa
gaaaacaagaaactcaatgaagagctgagcactctgaaggggacagagagtgaagcctgt
gaagaaaagctgttacaacagcaaaccaaaactaaggatgagattgaagcggagaagaga
gagttggataggctgctggagaagagaacgcaggaagtggagaacctgacagatgatgtg
aagcgtctgaacgagaaactgacagaaaccaacaaaataaagatggagcttcagttaaaa
ttggatgatattcagtcatctgcgacctctgtacagcatcgagagaaacgcatggaacag
gaaaaagagctgttggacaagaaaatggagtatttaaccacagagctgaagacgaaaact
aatgagctgctgaacaccaacagagagaagggcaaagagatacttgatctgcagggcagc
ctgaagagcagcaacgagcaggtggccagactggaaagtcagctcagttctctgagggaa
atcagtgaaaaccagaacaaaagagctgaagacctcaataacaaactaaaacaggcaaaa
gatgagcagtgtgcaatggaggagaaataccgcaatgagctcaatgctcacgtcaagctg
tcctcactctataagggcgcagcgactgacatggagacaaagaaccaagagctgagcaga
gcagtggaggagctcagcaagctggttaaagaaacaggagaagccaataagtctttagag
aagaaggtgtctgaagttgaagagctcaaaacccagcttaaagcagaacttgaagagaag
ataaagaaaatggaaaaggagctggaaaatgctacaatgaaagctgcaggcaaacgctgt
tgtactccttctctgactgaagaacagctggactccatgtgtccttcagcagctgccatt
gctgcgattgtcaagcccagcatgaagttctttgatctgtataatgcatttgttgagtgt
cagacacaactgcagcttgagaagcaggaaaccaggagggtaagccgggtcctggatgag
attgttcaggaggtggagtccaaagcgcctgttctgaagcgccaaagagaggagtatgag
agcatgcagaggtccatgacctccctgtgcagtaaactggaacaagctcgaactgagatt
tacagtttgcaaaaggagaaagatgaggccaagcagcgcagtgacgccatagagagagac
aaactaaggactgagagactgctagaggatacatctgatcagttgtgctctgttctggtt
gagctggagaaagccagaggcaatcaggtggccaaggatgatggcagctctgcagacatt
tccagcacctcagaggtcatcagctcgagccagctgtcgttccgcagcgtgaccgatctc
cagaggcagaaccaaaccctgttgggaagactgagggagctggaggaggagaaggacaga
gagcagacacgtgtaacatcagcacgcataaaggagctggagactcttgtggagaaactc
cagaaggaggctgagcagctgcgggagcagaggaaccagcagaaaacgctggcagactcc
agcaccaggcagagagacatgtacaaggcgctgctgactcagagcacaggcttcagtctg
ccacctcaaggtcaaggctctgcaccggatcgtccttcggcgccagcaactcgctccact
cctcagagagccactgctgcagagtcggcccagaccgctcagacaaaagctgctttaaag
cagctcaatgatgccttcaccctgtataagaaggagaaggcagagaatgacagaatgctg
aatgaaacaaacgaccggctgcagagggagctgaccgagctgcgctccagccgtgccaag
ctgacctcccagctggagttcagtaacaagaggtatgagattcttcaagagacagtgtcg
gcgtaccgcagagagatttctgccctgcaggagaggaaccagaaaatggctgcaacggct
caaagacacgagcacatcatccacaccatgagccaggacctgagacagagtaatgaaaaa
ctggccctggaagaggtgcgtgtagaaaacctaactaaagaaagagacatattgagacag
gcagagtctcggttaaatcaagaaagggaagccatgttggccgaacatcgcaaccagaac
ctgctgctaagtaatctcaagaccatacagttgacgatggagcattcagatactcagact
cgtcagcgacttaacaacaaaatagaacaactggaggcagagctgacctcgatgaggacc
agactgcaacaggaagttgctcagagacatgccctcggacgcaccagtgatgcaaagctg
ttagaaacaaagaaccagctgaagacccagacaaccctgctgcagaagaccaaagagctg
ctgcgtagcactgagcagcagctgactgtgctgaagactcagcccacttctgcttcctcc
tctgaggctgccgccgcctccaacagcacgaccaccccagctaccagagctgctggcctc
cgagcaccacccagagtccactctccagttccagcagcttctcagcagcccagccagtca
gagcaggagctctcagaggtgaaaaatctcgtgcgagttactaaggagcaaaacactgag
ctgacagaccagctgaagaacgccaatgccagagttgaacagtaccaatctgtggtactg
gctctggaggaaagccttaagaaagagaaggagttacaaactcctctaaaggacagactg
aaggagttagaagaggtgcagaagcagctggagaagaagattttagagttggagaaaatg
aagcagcaggagcaagaggagagaaggaaggctgtggacgctatggagaaacaagtctgt
gagctgcagcggagtctgaaggccagccaggcagcgcagcaggaggcactggagaggtct
gctgctgctctcacacaggagcaaaaagccacgcaggaaagcctgttgcagactaagcta
gctggagaggcacaagctaagtacgagcgcgagttgatgcttcatgctgctgatgtggag
gctctgcagcagctgaagaaaacatcccagcaagaaacgacacgcaagagggagttggag
gaagaactgaagaagactactgctcttctgcaggagaaaaccacaacctggaacataatg
gagaaacagcttaaggaggaacagtccagtctgagccgtcgctgcgaggagctggggaaa
cagaatgctctcctgcaccagcagatggatgaaatggccaccaggagtcgccagctgcaa
caacagcagcagcagcagcagaatctggacctgtcgttcagtgaggagggaaaaaccaca
gaacagatactggaaatactcaggtttgtacggcgagagaaggagattgctgcagctcgt
aatgaggcgtcggaaggagaagctctacgctacaaacaacgagtcgagcaccaagacaga
caactgaaggagctacaggaaactctgaacgctgagagggaaaagatgcaagcgacggca
aagactttggctgagcagcaggaacagctgaagaggatggagacgatcagttctctgcaa
gaaaccaacaagttgctgaaaatggaccgagacaaactggagcaggagcttcagcaggct
caggctaaagtgacgaagctgcaaagagacatcggtccactgcacaactctctgtctata
ctgtcagagaaaaatggctccctgcaggccgataagaggctgctggaagaggacctcaaa
cgattaaaggccagagttcaacaactccttagccagcacaaagatggggatgttgaggag
aagcagaaactcacagctgaaagagagtctcagcaaaagcgcattacgcagctagctgaa
gaaacagccaagctgaagaccgagctggccagatccaacgccagcagtaattcagctcag
tcccagctgcaaggcctaaaagactctgtggctcgcttaacgtcagaaagagacgctctt
aaaaaagacgtggagacaaaaaataatgacattctggagaagaacaggaccatcaatcag
gtgaaaaagatcggacgacgctacaagactcagtacgaggagctcaaagcgcagcacgac
aagatggtcagtgaaacggctgctaaagcaggaagtgagacggcgccaaaccaggaatca
cagcaggatctgaacaaagtccgagaggaccttaaaaagacccaggatgagctgaacgcc
ttgaaagaagaagcgcagaaaaaacaggaggaggcccagaaatccatgcaggagttggag
gcaactcagaaggaaaaccagcagaccaaagaaaagctccaagaagtccagaaccagctg
actcagaaccagaaccagctcactcaggtccagtctcagttgtctcagacccagactcaa
ctgcagcagaaccagaaccagctgacccagagtcagaaggaccttcagcaagccaagagt
cacacccagcaggtacagaaccagttaaaatcagcccagtctcaagctcaggcccgtcag
aaccagattcagcaggtccagagggagcttcagcagactaaagaagccctccagcagaac
ctcgctaaacagaaagagcttcaacaaaccaaccaagccagccaacagagcctcagccag
gaagtgaacaatttaaaaacatctctgagccaagctgaaaacaaagtgactgagcttcaa
ggcaaggtggacagcctgcagaagacggttgttgagcgtgaagcagacaacaagcgtctc
caggagcagctaaatgaagcaaagcaggctcatgaagcgaaccaagctgcacaggccaac
cagaaccagaaccagagttccccgtctacccagggcactgatgctaaagctgccggtgac
gctaaccaggcactacaggatgagctgacaaaactcaaacaagagctatctgaaatcaga
agcagagaggagcagctcaaacagcagatggctgagaaagaggagaagatgaggaaggcc
atcctgggagccaaacttaaaatcaaccaagtaaacagtgctaaagagcagctcagtcag
gagaacgaagaactgaaacagaataaggaggagctggaggtgagaatgaatgcactcaag
tctcagttcgaaggaaagtgtttacggctggaaagagagctgaaagaactgagagagacg
cagacccactctgaccaaagagaagaatctccggaccagagcggagccaaggtgagcgat
caggccagatcttcagaccagagacagatttctttgaaaagtcctgttcaagaaagggga
agctccagcgtttctgagcctcccactgccaacattcgacccactcagagtactccgtct
cccagtagcaagccaagcccctccgcaggaagcaaggccactcctcgtgccagcatcagg
cccatggttaccccggtaaccgtccccatcgcaacccctacagcaacagtgatgccgact
acgcagactgagagtcaagaggcgctggtgagctcaggaccgtctgtacactcgaccagc
tccgctctcgtaaacactcccacctccataactcagccaaccagcacccaggccacagcg
tttgtccaaccaactcagcaacaggcggccaatcaggatgcaggatccagcatggaggcg
gagcggccatccacatcctcctctatgactggagcaggttcaaagcgaaaggctgatgag
gaggaagaggaaagtagaccagagagttcccacacacctccaaccaccaaaaaactacga
ctaaagcccacaatagcactgcagatggagggtgaagaggagattgatggagagctgagg
gatgtgagagagcagctggagtcaccggatgacagccaggagctcccagaggagagtttt
ccagttttagctgtagacctggaggaagagggcatttcccagtctgtcccctctgatcag
ggctcccagctctctgcaataattcgagatgttattgtgattgacacggacagcgagagc
cccgagaaccaaaagcaggaaggtgaagaagatgaggaggaggaggaggaggaggaggag
gaagaggaggaagaggaaggaagaggagaagagcagttcaaggagggaggtgatgatgat
gatggtgctgatgatgctgatgctgctgacagcgggatgaggggagctgaggagagtatc
gaggagagcagggaagctgaagaggagcgaaacgaagcaggaccttctggtggcacaaac
actgaggagaatgtgagcggagcttcctcaggctcccagtgttcctctgagccgactttt
agtggagaaggcagcagttgtctcatggagtcagaaacccccagggactccatacacctg
ccccccacgtgctcctctacatactctccgtcctcgtcctccgtcacacctcggctgcct
cacacacgcaggccgccgcacgctctcccaccgcggctctacatccaagctccagctcct
gaactgggacccccacacacacaaagacaatcctctcagctgcgtcgaccatcttcagga
cgtggacctcagctaacccctggaattgccacaatgcctttctttgatgatgatgacaga
atggttcccagtactcccactttggtggtcccacatcgcactgatggcttcgctgaggct
atacattctccccaggttgcaggtctgtccaccaggttcaggtttggacctccagaagat
ttgctgcaacagacatcagcttcacactctgacctgggacagctggcctcccaaggaggt
ctaggaatgtatgagtctcctcttttcctggctgctcacgatgaagatggaggaggaaga
agtgtccctactacacctttacaggtggctgcaccagtgacggtcttgactgagtctgtg
cccacagacagctgtgacaacatggcctcccagtcggttcccatggttactgcctcctct
gggatggctgctgcagcagatgatggagatgaagtcttcatggagcaggaaggagacggc
ccaggtattgaatcctcgttggagagccagacagacatggagtcaacaggacagcagagt
gatgatgcagcacttccatccaccagccaggaccctgacaccagcagtgttactctgcgc
cgcgcagtgaccagtcaccctctgattagcagcctgtcagggagaggacccagaggaggg
agactcctcagccgcagaggaacttttcctcgaggaggaagaggaggagccatgggcaga
ggaggcatcccctaa
DBGET
integrated database retrieval system
