Kryptolebias marmoratus (mangrove rivulus): 108239614
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Entry
108239614 CDS
T05608
Symbol
irf4a
Name
(RefSeq) interferon regulatory factor 4a
KO
K09445
interferon regulatory factor 4
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kmr03000
]
108239614 (irf4a)
Transcription factors [BR:
kmr03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
108239614 (irf4a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
108239614
NCBI-ProteinID:
XP_017277907
UniProt:
A0A3Q3AUP6
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Position
LG20:complement(9957037..9963251)
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AA seq
461 aa
AA seq
DB search
MNLDEDSGLSVSCGNGKLRQWLIEQIDSRRYSGLVWENDEKTIFRIPWKHAGKQDYNREE
DSALFKAWAMFKGKYKEGVDKPDPPTWKTRLRCALNKSNDFDEIVERSQLDISEPYKVYR
IIPEGTKKGMKMSRLEETPSHVNAHGYIPPYTSLHNQVPGFVVSQERRDWRDYHAPPEQS
VSNTHPHGQHAELQYGQCHYQPSIGRVWPGSHTENGFQLSFHTYFSDSQPPMYAMDHNSA
MLDCSLHVSLYYRESLVKEVTITNPDGCRITSSSASSPSSSSSSPCPEDKFHSGAEVVLF
PAPYPESQRQGAEMLPNILEKGVLLWMTADGLYAKRLCQGRVYWEGPLAPYLDKPNKLEK
DQPCQLFNTQQFFDELQNISHNSRHLPRHQVTLCFGDEYPDPQRPQKLITAQVEPVFAKR
LLYYYQQNTSPYLRAYDHIQEQNTSPSIDYASQRPLQHIQE
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggatgaagacagtggtctgtcagtcagttgcggcaacggcaagctgagacag
tggctgatagagcagattgacagcaggcgatattccggccttgtgtgggaaaacgatgag
aaaaccatcttcaggattccttggaaacatgcaggaaagcaagactacaacagagaggag
gattctgcactcttcaaggcatgggcaatgtttaaaggaaaatataaggaaggtgtagac
aaaccagacccccccacatggaaaaccagattacgctgtgccctcaataaaagcaatgac
tttgatgaaatcgtagaaagaagccagctggacatctccgaaccgtacaaagtttacaga
atcatcccagagggaaccaaaaagggaatgaagatgagccgcttggaagagacaccctca
catgttaatgcacatggctatattcctccttacacatcactgcacaaccaggtgcccggc
tttgtggtttcccaggagagaagagactggagagattatcatgcaccgccagaacagtct
gtgtctaacacacaccctcatggacaacatgcagagctgcagtacggccagtgccactac
cagccgtcgattgggcgggtttggcccggttcacacacagaaaatggttttcagctctcg
ttccacacctacttttcagactctcaaccgcccatgtatgcgatggaccacaacagtgcc
atgctagattgcagtctgcatgtgtctctatactacagagaatctctggtgaaagaagtt
accatcaccaacccagacggttgtcggatcacctcctcctctgcatcctctccatcatcc
tcctcatcttctccgtgtccagaggacaagtttcacagtggtgcagaagttgttcttttc
ccagccccatatcccgagtcccaaagacagggcgctgagatgcttcccaacatactggag
aaaggggtgcttctgtggatgacagctgacgggctgtacgctaaacgcttgtgtcaggga
cgggtgtactgggaaggacctctggctccatatctggataaacccaacaagctggagaag
gatcagccttgccaactgtttaacacccaacagttctttgatgagcttcaaaatatatcc
cataatagtcgtcatctaccacgccaccaggtgactctgtgttttggagacgaataccct
gatccacaacgtccacagaagttgatcacagcacaggtggagccagtgttcgccaagagg
ttgttgtactattaccaacagaacaccagcccctacctgcgggcctacgatcacattcag
gaacaaaacacctctccatcaatagactatgcttcccagagacctctgcagcatattcag
gagtga
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