Kryptolebias marmoratus (mangrove rivulus): 108239666
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Entry
108239666 CDS
T05608
Symbol
gigyf2
Name
(RefSeq) GRB10-interacting GYF protein 2 isoform X2
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmr03019
]
108239666 (gigyf2)
Messenger RNA biogenesis [BR:
kmr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
108239666 (gigyf2)
Surveillance factors
Other surveillance factors
108239666 (gigyf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
Motif
Other DBs
NCBI-GeneID:
108239666
NCBI-ProteinID:
XP_017278022
LinkDB
All DBs
Position
LG20:11317850..11333847
Genome browser
AA seq
1350 aa
AA seq
DB search
MAETQTLNFGPEWLRALSGGGGGGGSGGGGSGSGLGGVSGSSSLIASPPLSPALPKYKLA
DYRYGREEMLALYVKDNKIPIDLHDKEFLSILQEEPLPPLALVSFTEEEQRNFSMSVNSA
AVLRLTGRGGGPIAGAPRGRSTSRGRGRGRGDGGFYQRSFDDVEGFGRGVREMHRSQSWE
ERGERRFEKPGRKDPAEAAPGHFPMNHIRGAYEDGGAGLPRKHDFTRSESENWRTSRDDQ
NGEDDEGVWRLAGSQRDNDRWCPPSPDGPRSAGWREHPDQRRRFPFDAREDERGYRRQRS
GSGSFEDERDSLPEWCLEDADEEAGTFDSSGAFLSLKKASKEPIPEEAELDFKPLEECEE
GLEEADTSPRDTKETEKEAKREADRKEFARVSEEAPAVHPPVASAALESHPPAQSLSPSH
PHRTEESERPAERQPPLELPPEPCKAPMRVPMSTSILESLPMTHVSSALPEVSAPSSSVH
LPQQKPMEVPMVMSNPSPFTSSILAPISRPTIMPHDTDEDEGLKHFEQEAEKMVAYLQDS
GVDDDRLTAKTSEKPKPAGLPLTHEAALKWFYKDPQGEIQGPFSNQEMSEWFQAGYFTMS
LLVKRGCDEVFQPLGEIMKIWGRVPFSPGPAPPPLQSDGDQERLKRQQELTALNLYQLQQ
LQYQYLLRQQYAQAMAQQKALVLNSAPLQQQQQHQQQINHLLQQYQALKISASDSLLPPV
TRSLSVPDSGSVWEMQNPSSQASCTPNLQQAAASTWEGSSVWDLPIDSMAQAPTIEQMQQ
FEKAKSAKLELERREAEMRAKREEEERKRLEEALRARQEEERKRREEEELARQKQEEALR
RQRELEEAQRRQKEEEERLAQEEALQKLEERRREEEEKQKREEFLRKQEEEQRKQEELEA
LRRHEEEKRAEEEAAAAAAAAAAAAAAALAQQQEEQKRREQEAQRHQELQRQRQQQQEAL
RRLQQQQQQQQQLAQIKLPSSSKWGQQSTNTLNPAQNALSLAEIQKLEEERERLTLEEQR
RQQQEHLKQQQQAALQQAQQSHAKLSGWGNVAKQPAMTKSLLEIQREEAQQMKQRKEQPH
HPHPVATQQARPQNRTPSLSNSVWGSVNTSTNWGSDPSSIWGDTHNSNMGFWDEAVKEAV
QQPPQNKKGNSQKNNKGNANLSNSLSGRSSKKVEEEEKLLKLFQGVSKSQQDTFMQWCEQ
TLHTLNTANNLDVPTFASFLKEVDSPYEVHDYVRAYLGDTPESKDFAKQFLERRAKQNAN
QQKQAPSNQQLAKQQQQQQQDSVWGGTGPSTIYQSNHMSSQQQQRFETVTSGKKKKKQKM
VRADPSLLGFSVNASSERLNMGEIETLEDF
NT seq
4053 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaacccagacgcttaactttggaccagaatggctccgtgccctgtccggaggc
ggtggcggtggcggcagcggcggtggcggcagcggcagtggactcggtggagtcagtgga
agcagcagcctcattgcctctccacccctctcacctgcgttgccaaagtataaactcgca
gactatcgctacgggagagaagaaatgctagcactttatgtaaaggataacaagatccct
atagacctacatgataaggagttcctgtccatactgcaagaggaacccttaccacctctg
gcacttgtgtcttttacagaggaggaacagagaaacttttccatgtctgtaaacagcgca
gctgtacttcggctgacagggcggggaggcggaccgatagccggggcgccgaggggccga
agtacatcaagaggtagaggtcggggaagaggtgacggaggcttttaccaaagaagtttt
gacgacgtggagggttttgggcgcggagtgcgagaaatgcatcgctctcaaagctgggaa
gaaaggggggagagacgatttgaaaagccaggacgaaaagatccagcagaagctgctcca
ggacattttccgatgaatcacattcgaggcgcttacgaggacggcggggcgggactgccg
aggaagcacgactttacgcgctcagagagcgagaactggcgcacttctcgcgatgatcag
aacggtgaggatgatgagggggtctggcgcctggcaggttctcaacgggacaatgaccgg
tggtgccccccgagcccagacgggcctcggtcggcagggtggcgggaacacccggaccag
cgtcggcgtttcccgttcgacgcgcgggaagacgagcgcggctacaggaggcagaggtcg
ggcagcggcagctttgaggacgagagggacagcttgcccgagtggtgtctggaggacgca
gacgaagaagcgggcacattcgactcctcgggggcatttctgtctctaaagaaagcatca
aaggagccgatcccagaagaagcagagctcgacttcaaacccttggaggagtgtgaagag
ggcctggaggaggcggacacgtcgcccagggacaccaaagagacagaaaaggaggccaaa
agagaagctgacagaaaagagtttgccagagtctcggaagaggctccagctgttcatcca
cctgttgcctcggcggccttggaatcccatcccccggcgcagagtttatcccccagccac
ccccacaggacggaggagtccgagagaccggccgagcgccagccgccccttgagctcccg
ccagagccgtgcaaagcgcccatgcgtgtcccgatgtccacaagcattttggagtctcta
cccatgacccacgtttccagcgccctgccagaggtgtctgctccatcatcatcggttcat
ctaccacagcagaagcccatggaggtccctatggtcatgagcaatccctcacccttcaca
tcaagcatattagcacctataagcaggcccaccattatgccacacgacaccgacgaagac
gagggactaaaacactttgagcaagaggcagaaaagatggtagcgtacctacaagacagc
ggcgtggacgatgacagactgaccgcgaagacgtcagaaaagcccaagcctgcaggcctg
cctctgacccacgaagcagccctcaagtggttttacaaagacccgcagggggagatacag
ggtccgttcagcaatcaggagatgtcggagtggtttcaggctggttatttcaccatgtcg
ttgttggtcaaaagaggctgcgatgaagtgtttcagcctctgggagagatcatgaagatt
tgggggagggtgccattttctccaggccctgcacctccacccctacaatctgatggtgac
caggaaaggttgaaaaggcagcaggagctcaccgccctcaacctttaccagttacagcag
ctccaatatcaatacctcctcaggcagcaatatgcccaggctatggcccagcagaaagct
ttagttcttaactcagctcctcttcagcagcagcagcagcaccaacagcagataaaccac
cttctacagcaataccaagctctgaagataagcgcttcagatagtcttctacctcccgtg
actcgatccctgtctgtaccagactctggttctgtgtgggaaatgcagaacccatcctct
caggcttcctgcacaccaaacctccaacaagctgccgcaagcacatgggaaggcagcagc
gtctgggatttgccgatagactcaatggcgcaggctccgacgatcgagcagatgcagcag
tttgagaaggccaagtctgcaaagctggagctggagcggcgcgaggcagaaatgagagcg
aaacgggaggaagaagagcggaaacgcttggaggaggctctcagggctcggcaggaggag
gagcggaaacgacgggaagaggaggagctggcgcgacagaaacaggaggaggctttgagg
cggcaaagggaactagaggaggcgcagcgtaggcaaaaagaagaagaggagaggctggcg
caggaggaagcactccaaaaattagaagaaaggcggagggaagaggaagagaaacagaaa
cgggaagagttccttcgtaaacaagaagaggagcagagaaagcaggaagaactagaagca
ttaaggaggcatgaggaggagaaacgggcagaggaagaggcagccgccgccgcagcagct
gctgcagctgccgccgccgccgctcttgcacaacaacaggaggagcaaaaaagaagagag
caggaggcccaaagacaccaggagctgcagagacagcgacagcagcagcaggaggccctc
agacggctgcagcagcaacagcagcagcagcagcagcttgcacaaataaagcttccatct
tcttctaagtgggggcagcaatcaaccaacactctaaacccggctcagaacgccctgtcg
ctggccgagatccagaaactcgaggaggagagggaacgactgacgctggaggagcagaga
cgtcagcagcaagagcacctgaagcagcagcagcaggcggccctgcagcaggctcagcag
tcccacgccaagctgtccggctggggcaacgtggccaaacagcccgccatgaccaagtct
ctgctggagatccagagggaagaagcccagcagatgaagcagcggaaggagcagccgcac
catccgcaccccgtcgccacccaacaggcccgaccgcaaaaccgaaccccgtcactcagt
aactcggtatgggggtctgtcaacaccagcaccaactggggctcagatcccagcagcatc
tggggcgacacccacaactcaaacatgggcttctgggacgaagccgtgaaggaggcggtc
cagcagcccccccagaacaaaaaaggcaactctcagaagaacaataagggcaacgccaac
ctcagtaactctctgagtgggcgaagcagcaagaaagtagaagaggaggagaagctgctg
aagttgttccaaggcgtcagtaagagccagcaggacaccttcatgcagtggtgcgagcaa
acgctgcacacgctcaacaccgccaacaacctggatgttcctacgtttgcatccttcttg
aaggaggtggactccccgtacgaggtgcacgactacgtcagggcctacttgggagacacc
cccgagtccaaggactttgccaagcagttcctcgaacgccgtgccaaacagaacgccaac
caacagaagcaggcgccatcgaaccaacagctcgccaagcagcagcagcagcagcagcag
gactcagtgtggggcggaaccggaccctcgacaatctaccagtcgaaccacatgagcagc
cagcagcagcagcggtttgagacggtcacctcagggaagaagaagaagaagcagaagatg
gtgcgagcagaccccagccttttaggtttttctgtcaacgcgtcgtccgagaggctgaat
atgggagaaatcgagactctggaggacttttaa
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