Kryptolebias marmoratus (mangrove rivulus): 108239725
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Entry
108239725 CDS
T05608
Symbol
chaf1b
Name
(RefSeq) chromatin assembly factor 1 subunit B isoform X1
KO
K10751
chromatin assembly factor 1 subunit B
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
kmr03036
]
108239725 (chaf1b)
Chromosome and associated proteins [BR:
kmr03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
108239725 (chaf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
ANAPC4_WD40
EIF3I
CAF-1_p60_C
WDR55
B-prop_COPA_B_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
NBCH_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_EML
eIF2A
Beta-prop_SCAP
Beta-prop_HPS5
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
108239725
NCBI-ProteinID:
XP_017278116
UniProt:
A0A3Q3B7K2
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Position
LG6:14044386..14053433
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AA seq
613 aa
AA seq
DB search
MKVVTCEIAWHNKEPVYSLDFQHSSDGRFHRLATAGVDTTVRMWRVDTGPDGKAVVEYLS
NLARHTKAVNVVRFSPNGEFLASGGDDSAIFLWKLIDCKEPEQAPVFQEDEDAQLNKESW
SVVKTLRGHIEDVYDICWTRDGNLMISGSVDNTAIMWDINKGQKLCILNDHKSYVQGVTW
DPLGQYVATLSCDRVMRVYSTHTKKKAFCVSKMSSGSPTEGEAKQYRMFHDDSMRSFFRR
LSFTPDGSFLLAPAGCVEVGENIINTTYVFSRKSLKRPIAHLPCPTKATLAVRCCPVYFE
LRTKKGEDGSAEALPNLFQLPYRMVFAVASEDSIFLYDTQQSLPFGLVSNIHYHTLSDLT
WSGDGSFLAVSSTDGYCSFLSFSSGELGTPLTEPPTLEIFVPNSGAEKKRKKSSATKSTS
PVSQPPSSAPNATSQPSCGKDAPCPAPAEEKKGTPQTKSKPQPRRITLNTLEGWGKPASP
KTSSASQTAGPGSAPSTLQPRLTPLSPTSSSANQPRLAPLTPSTPKVLNSVNSPGPTTPK
ASTTPKGPTPRRVSLTPVALRSPAVSSLFKNPSSTEKAKHERPSPPTDPLCQPPESKRPK
TSSASPKTGVGKD
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtggtaacgtgtgagatagcatggcacaataaggagccggtctacagcctggac
tttcagcacagctcagatggacgctttcaccgcctggccacagctggagtggacaccaca
gtcagaatgtggcgagtagacacaggtccagatgggaaggctgtggtggagtatttgtct
aacttggcccgacatacgaaggctgtcaacgtggtccgctttagccctaatggagagttc
cttgcttcaggaggagatgattctgctatttttttgtggaagctcattgactgtaaggag
ccggagcaggctcccgtcttccaggaggatgaagatgctcagctcaacaaagagagctgg
tctgtggtcaaaacactgagagggcacatcgaggacgtgtatgacatctgctggacgcga
gacggaaacttgatgatttctggatctgttgacaacactgcgatcatgtgggacatcaac
aaaggacagaagctgtgtatcttgaatgaccacaaaagctatgttcagggggtgacctgg
gatcctctgggccaatatgttgccactctcagctgtgacagggtgatgcgtgtgtacagc
acacacacaaagaagaaggccttctgtgtcagtaaaatgagctcagggtcgcctacagag
ggagaggccaagcagtacaggatgttccacgacgacagtatgaggtcgttctttcgtcgc
ctttcgttcacacctgatgggtcgttcctgctcgccccggctggatgtgtggaggttgga
gaaaacatcataaataccacttacgtcttttccaggaaaagtctgaagagacccatcgcc
cacttgccgtgtccaactaaagccactctggctgtgcgctgctgccctgtttacttcgaa
ctcaggaccaagaagggagaagatggttcggccgaggctcttcccaatttgttccagctg
ccgtaccgcatggtgttcgcggtggcctccgaggactccatcttcttgtacgacacgcag
cagagccttccatttggcctcgtgtccaacatccactaccacacgctcagcgacctgaca
tggtctggtgacggctccttcctggccgtctcctccacagacggttactgctccttcctg
tccttctcttcgggcgagctgggcactccattaacagagccccctaccttggagatcttt
gtcccaaacagcggcgctgagaaaaaaagaaagaagtcatcggcgactaagagcacctct
cccgtgtcccagcccccaagctcagccccgaatgccacatctcagcctagctgtggcaaa
gatgccccctgtcccgccccagcagaggaaaagaagggcacccctcaaaccaaatccaag
ccccagccccgtaggatcaccctcaacaccctggagggctgggggaagcctgctagccct
aaaacgtcctcagcatctcagaccgcaggtcctggaagcgcaccttctactcttcagccc
cgtctgactcccctcagccccaccagctcctccgcaaaccagccccgacttgctcccctc
actccctccacaccaaaagtcctgaacagcgttaactctccagggcccactacgcccaag
gcttcaaccaccccgaagggacccaccccgaggagggtgtccctgactcctgttgcactt
cgatctccagccgtcagctcacttttcaaaaacccgtcctccactgagaaggccaaacac
gaacggccgtctcctcccacagatccgctgtgccagcccccagaatccaaacgacccaaa
accagcagcgcctcgccgaagaccggtgtgggtaaggattag
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