Kryptolebias marmoratus (mangrove rivulus): 108239734
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Entry
108239734 CDS
T05608
Symbol
pcdh8
Name
(RefSeq) protocadherin-8
KO
K16499
protocadherin delta 2
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
kmr04515
]
108239734 (pcdh8)
Cell adhesion molecules [BR:
kmr04515
]
Cadherins
Protocadherins
108239734 (pcdh8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
108239734
NCBI-ProteinID:
XP_017278129
UniProt:
A0A3Q3GHV2
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All DBs
Position
LG6:complement(13214857..13218860)
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AA seq
967 aa
AA seq
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MGCCQLASAGVSLLLAAFSLTVHGTTTRYFTYEEDAPGTEIGNLSQDLKIDPADDPDTSF
RFMQESNSSVIHMRERDGLLSVAERIDREQLCPRSLPRCFVAFDIVALSREKFQLIHVEI
EVKDINDHSPRFARNETSLEIVENVPLESRFPLQIALDLDVGENYIQSYNISPSSHFAVE
VREGEDGLKFAQLVLVRELDREVEDSYTVQVTAYDGGVPAKSGSMTVNIKVLDFNDNSPT
FEHSSLKVELNEDAPVGHRVLRVHAFDPDQGVNGEVTYAFADGLSPEAARVFHVDPHSGD
VTLRAPVDFEKRRSYELRVRASDLGENSVPSTCSVAIDVVDVNDNAPEVNIKPMTSSSDG
VAFITEAAAAESFVALISTSDRDSGSNGYVRVSLLGHEHFALQQAYGDTFMIVTTSTLDR
EKIQEYNLTVVAKDLGTPPFKTLRQYTISVTDENDNPPLFSKPFYEVSVLENNIPGSFIT
TVVARDPDVGKNAKVSYKLLDSEVPGGSPVSTYVSVDSVSGSLYTLRSFDYETLQQIEVV
IQAEDRGSPSLSSTSTISVRVVDQNDNYPYFTFPVLLNNSADVPLPYNAPSGYLALCVSA
EDADDGVNGELSYHVVQGDPKLFTLNKNTGEIALKQWLTAEIGDVLEITIAVSDSGRSPL
SSSATIRFVVSDTKPPEDQVVIVLRSSEEESSSFDGSLIIIIVLSGGCALLLIAIVAVVV
TCKRGRRGRSRTRKRDVCQGLFDSRPLPRLSSAEPNIYTGQQGFFQERTSLSLDDSCLYE
ERSRDSDTKMFLPSKHFQPTSVWQTDRYCLQVSGISSNDQLSVKDSGKGDSDFNDSDSDT
SGDGGKKNFSTFQPRRKSTANSLSRDCQGSYCAIPPRSFRTSRDSAYTMGFSPVPDFTNP
HGIKNDCSYGTNQPKPRSSMQTFSRAGTLPSYFPQQPHDAVVGLAAVQKESPDIETVATE
LEVATVF
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgggatgttgccagcttgcgtcagctggagtgtccctgctgcttgctgcgttctccctc
acagttcacggtacaaccacaaggtatttcacctatgaggaggacgcacccgggacagaa
ataggcaatttgtcacaggatttaaagattgatccggctgacgacccggacacatccttc
cgcttcatgcaggagagcaactcctcggtgatccacatgcgggagagggacggactcctg
agcgtggcggagagaatcgaccgggagcagctgtgccccaggtccctcccccgctgcttc
gtcgctttcgacatcgtggccctctccagggagaagtttcagctcatccacgtggagatc
gaggtgaaggacatcaacgaccactctcctcgctttgcgcgcaacgagaccagcctggag
atcgtggaaaacgtgcccctggagtccaggttcccgctgcagatcgctctcgacctggac
gtgggtgagaactacattcagagctacaacatctcccccagcagccacttcgccgtggag
gtgcgcgaaggggaggacgggctgaagtttgcgcagctggtgctggtgagggagctggac
agggaggtggaggactcctacacggtgcaagtcaccgcctacgacggaggagtccccgcg
aagtccggctccatgaccgtcaacattaaagtgttggacttcaacgacaacagcccgacg
ttcgagcacagctccctgaaagtggagctgaacgaggacgcgccggtggggcacagagtt
ctcagagtgcacgccttcgacccggaccagggcgtcaacggcgaggtgacgtacgcgttc
gcggacggcttgtcacccgaagccgcccgcgttttccacgtggacccgcactcaggcgac
gtgacgctgagggcgcccgtggactttgagaagaggcgctcgtacgagctgcgcgtcaga
gcctcggacctgggggagaactccgtcccgtccacgtgcagcgtcgcgatagacgtcgtg
gacgtgaacgacaacgcgcccgaggtcaacattaagcccatgacctccagcagcgacggg
gtcgccttcatcacggaggccgcggccgccgagagcttcgtggctctgatcagcacctcg
gacagagactcgggctccaacgggtacgtgcgcgtgagcctgctcgggcacgagcacttc
gccctgcagcaggcctacggggacacgttcatgatcgtcaccaccagcacgttggacaga
gagaagatccaagagtataacctgactgtggtggcaaaggatctgggaaccccccctttt
aagactctgaggcagtacaccatcagcgtgacagatgagaatgacaacccccctctcttc
agtaagcccttctatgaagtttcagttctggaaaataacatcccaggttcatttataacc
actgttgttgcacgggatccagatgtagggaagaatgccaaagtctcctataaactcctg
gactcagaggtgccagggggatccccggtgtccacttatgtttctgtagactcagtttca
gggtctttgtacacgctgaggtcctttgattatgagacacttcagcagattgaggtggtc
atccaagcagaggacagaggctccccctccctttcgagcacgtcaacaatcagtgttaga
gtcgtagaccagaatgataactatccatacttcaccttccccgtcctcctgaataactct
gctgatgttcccctgccctacaacgcaccctcgggctacctggctctctgtgtgtcagcg
gaggatgcagatgatggggtgaacggcgagctctcctaccacgtcgtgcaaggtgaccca
aagctgtttaccctgaacaaaaacacgggtgagattgctttgaagcagtggttgacagct
gaaataggagacgtgctggaaatcacaatcgcggtgagcgacagcggccggtccccgctc
tccagcagtgccacgatcaggtttgtggtctccgacacgaagccccccgaagaccaggtc
gtcattgtgctgcggtcgagcgaggaggaaagctccagctttgatggctcgctaattatc
atcattgtgctcagcggaggctgcgcattgctgctaattgcaatagtggctgtggttgtc
acctgcaagcggggccgtcgggggagaagccgcaccaggaagagagacgtgtgccagggc
ctgtttgacagcaggcccctgcccaggctcagctcagcagaaccaaacatttacacaggc
cagcaggggttcttccaagagaggacgtctttgtctctggatgactcctgcctgtatgaa
gagagaagcagggactctgacacaaagatgttcctgccctccaagcatttccaaccaaca
tctgtgtggcaaactgacagatactgcttgcaagtgagtggcatcagcagcaacgaccag
ctgagcgtaaaggacagcgggaaaggagacagcgacttcaatgacagcgactctgatacc
agcggggacggaggcaagaagaactttagcacgttccaacccaggcgaaaaagcactgct
aacagcttatccagggattgtcagggcagctactgcgcgatcccaccaaggagcttccga
acctccagagacagcgcgtacaccatgggcttctccccggtgcccgacttcaccaacccc
cacggcattaagaacgactgcagttatggcacaaatcagccaaagccaagaagcagcatg
cagacgttttccagagctgggactcttccttcctacttccctcagcagccgcatgacgct
gttgtcggcctggctgcggtccaaaaagaaagtcccgatattgaaactgtggcgacagaa
ttagaagttgcaaccgtcttttaa
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