Kryptolebias marmoratus (mangrove rivulus): 108239800
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Entry
108239800 CDS
T05608
Name
(RefSeq) protocadherin-17-like
KO
K16499
protocadherin delta 2
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
kmr04515
]
108239800
Cell adhesion molecules [BR:
kmr04515
]
Cadherins
Protocadherins
108239800
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
DUF4788
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
108239800
NCBI-ProteinID:
XP_017278237
UniProt:
A0A3Q3B134
LinkDB
All DBs
Position
LG6:complement(13177056..13191853)
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AA seq
1091 aa
AA seq
DB search
MRLSVPIFFLLWVKALTLKNLNYSVPEEQGPGTVIGNIAKDAGYGTMERGKKSNFRVLEN
SAPHLVDVDPESGLIFTKQRIDRETLCRRNPKCQLSMEVFANDKEICMIKIDIQDINDNS
PSFPSDHVNIDISENAAAGTRFPLTIAHDSDSGENGIKTYQVTRDDYNTFSLDLKVRGDG
TIYPELVVQRPLDREDQSHHTLLLTAIDGGEYPRSGSMQINVRVTDSNDNSPVFEKSSYV
LEIPENSPPGKVLIDLNATDQDEGSNGQVVYSFTGYASERIQDLFSIDPNTGVIKVQGEI
DFEENPIIEFDVQAKDLGPNPIPGHCKITVKVLDKNDNLPIISFVSVRQGAISEAAPPES
VIALVRVTDKDSGRNGQLQCRVLGNVPFRLQENNDNFYTLLTDRPLDREAKDEYNVTIVA
RDNGIPSLNNTRSFTVKILDENDNAPRFTKTLYALQVPENNIPGEYLGSVLAHDPDVGRN
GTVSYSILPSHIGDVSVYTYVSVNPTNGAIYASRSFNYEQTKSFEFKVQAKDGGSPHMES
TSSVRVNIFDVNDNLPVIILPLLQNDTAEIPVPRNVGIGYIVATVKAVDHDHGESGHLTY
EITEGNDDHLFEMDPVGGEVRIAHALWEEIAPVVELVVKVTDHGKPPLSAVAKLIIKANT
EAAAGGGSSASGEQQHWDVSLPLIVTLCIISVMLLAVMTAIAVKSKHQDKETGNYNCRMA
EYSNPPVGKGKKKRINKSDIMLVQSEMEERDSASRMNVVSSPSLITSPICFDYQSPLPLT
LPRSEVMYLKTTSNSLTVPRSGCHSSFAGLSSDTPANRMSVIQTENFSSEPNYSGSRQPF
VQSSTFKDAERASLRDSGHGDSDQADSDQDTNKGSHCDTSAREALKMKAAAVNGQPFEKE
QDKSVHCTDECRALGHSDRCWMPKLRVGSQADSADNRTNLFIPVGMDAMVETEIYGTISC
NSRKTLTTFGKEQRDSTILVANVKPYLKSQRALSPPLQESPSASSSPTKSSTPLDLANQE
SKEERDGASDSSAYGPPDGQCSPLHTELEEPSYLTCELRPKSLSSSLIHSSVISQECGGS
DCALDPRDSGN
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctctctgtacccattttctttcttctctgggtaaaagccctgacattgaaaaat
ctgaattattccgtccctgaggagcaaggacctggaactgttataggcaatatcgcgaaa
gacgccggctatgggacgatggagagagggaagaaatcgaacttcagagtgctggagaat
tctgcaccgcatctggtggatgttgaccctgagagtggactaattttcaccaaacaaagg
attgacagggagacgttgtgcaggcgcaacccaaagtgccagctctccatggaggtgttt
gccaacgacaaggagatttgcatgatcaagattgacatacaggacataaacgacaactcg
cccagttttccctcagatcatgtgaatattgatatttcagaaaacgcagctgctgggaca
cgcttccctctgactattgcacatgactccgattctggggaaaatgggataaaaacgtat
caggtgacaagagatgattacaataccttctcgttggatttaaaagtgaggggtgacggg
actatttacccagagctggtggttcagagacctctggatagagaggatcagagccatcac
actctgcttctcactgcaatcgatggtggggagtatccaagatcaggctcaatgcagatc
aacgtcagagtgactgattcgaatgacaatagcccggtttttgaaaaatcctcctatgtg
ctagagattcctgagaattcaccccctggaaaagtgcttatagacctgaatgccaccgac
caagatgagggaagcaacgggcaagtggtctattcctttactggatacgcatctgagcga
atacaagatttgttctccatagatccaaatactggcgtcatcaaggtccagggagaaata
gactttgaggagaatccaatcatcgagtttgatgtgcaggcaaaagatctggggcccaat
ccgataccaggccactgtaaaattacagtcaaagtgctcgacaagaacgacaacttgcca
ataataagttttgtctctgtccggcagggggccatcagtgaggcagctcctccagagtca
gtcatagctctggtcagagtgacggataaagactcaggacgtaacggtcagcttcagtgc
cgggtgctgggaaatgtccccttcagactgcaagaaaacaatgataatttttacactctg
ctcacagacagacccttggacagggaggcaaaagacgaatacaacgtaacaatcgtcgca
agagataatgggatcccttctctgaacaacacaaggtcttttactgtgaaaattttagat
gagaatgacaatgccccacgctttacaaagacactgtatgcgttacaggtgcctgagaac
aacatcccaggggagtacctgggctccgttttggcccacgatccagatgtgggtcgaaat
ggaacagtgtcatactccatactgccatcccacataggagacgtgtcagtgtacacttat
gtgtctgtaaatcccaccaacggggccatttatgcctcacgctctttcaattatgagcaa
acaaaatcctttgagttcaaagttcaggctaaagacggaggctctccccacatggagagc
acctctagtgtcagggtcaacatttttgatgtcaatgacaatcttccagttatcatttta
cctcttctgcaaaatgatacagctgaaattccagtgcctagaaatgtgggtattggttac
atagtcgctacagtgaaagcagtggaccatgaccacggagaaagtggacatttaacctac
gagatcacagaggggaatgacgaccacctgtttgagatggatccggtgggaggagaggtc
agaattgcccatgctctttgggaggagattgccccagtggttgagctggtggtaaaggta
actgaccatggcaagccccccttatctgctgtggctaagctgatcattaaggcgaacacg
gaagcagcagcaggagggggttccagcgcgagtggggaacagcagcactgggatgtgtcc
ctgcccctcatagttaccctctgcattatctctgtcatgctcttagccgtcatgaccgcc
atcgctgtcaagtccaagcatcaagataaggagactgggaattataactgccgcatggct
gagtactccaatcctccagtgggaaagggaaaaaagaaaaggatcaacaagagtgacatc
atgctggtgcagagtgagatggaggaaagagattctgcgagccggatgaatgtggtgagc
agcccgtcactgatcacctcaccaatatgttttgactaccagagccctctgccgctcacg
ctgcccaggtcagaggtcatgtacctaaaaaccacctcgaacagcctgactgtgcctagg
tcagggtgccactccagcttcgcagggctcagctcagacactccagcgaataggatgtca
gtgatacagacagaaaatttctcctcagagcccaattattctggcagcaggcagccattt
gttcaaagctcaacatttaaggatgcagaacgagcaagcctgagagacagtggccatggt
gatagtgaccaggctgatagtgaccaggatactaataaaggctcacactgcgacacatct
gccagggaggccctcaagatgaaagcggcagcagttaatggccagccttttgagaaggag
caagacaaatcagtccactgcaccgatgaatgtcgtgcactgggacattctgacagatgc
tggatgccaaagttacgggtaggaagccaagcagacagcgcagataatcgcaccaacctt
ttcatccctgtgggaatggatgccatggtagagacagagatttatggcaccatcagctgc
aacagcagaaaaaccctcaccacgttcggaaaagaacagcgggacagtacaatccttgtg
gccaatgtcaaaccttacttaaaatcgcagcgtgcgctaagtccaccgctacaagagagt
ccatctgcatctagcagtcccaccaagagcagcacgcccctggacttggccaaccaagag
tccaaagaggagagggacggggcgtcagacagcagtgcctacggccctccagatggccag
tgctccccgctgcacaccgagctggaggagccctcctacctgacctgcgagctcaggccc
aagtccctgtcaagtagtctcattcacagctctgtcatcagtcaggagtgcggggggtcg
gattgtgctctcgacccgagggactccggtaactga
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