Kryptolebias marmoratus (mangrove rivulus): 108239984
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Entry
108239984 CDS
T05608
Symbol
lrrc4ca
Name
(RefSeq) leucine rich repeat containing 4C, genome duplicate a
KO
K07523
netrin-G1 ligand
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
108239984 (lrrc4ca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
kmr04515
]
108239984 (lrrc4ca)
Cell adhesion molecules [BR:
kmr04515
]
Immunoglobulin superfamily
NGL family
108239984 (lrrc4ca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
ig
Ig_3
V-set
Ig_2
LRR_14
LRR_9
LRRNT
DUF7617
Ig_6
Sp38
DUF4293
DUF6821
Syndecan
Motif
Other DBs
NCBI-GeneID:
108239984
NCBI-ProteinID:
XP_017278555
UniProt:
A0A3Q3EN82
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All DBs
Position
LG11:complement(19231193..19285871)
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AA seq
644 aa
AA seq
DB search
MFNKMTSSQQQQMMRGPRWNRALSDPLFVLLLALQLLVVAGLVRAQTCPSVCSCSNQFSK
VICTRRGLREVPDGISTNTRYLNLQENLIQVIKVDSFKHLRHLEILQLSKNHIRKIELGA
FNGLASLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLSYISEGAFEGLSNLRYLNLGMCNLKEIPNLTPLVKLDELEMSGNQLSIIRPGSF
KGLIHLQKLWMMHAQIQTIERNSFDDLQSLVELNLAHNNLTLLPHDLFTPLHHLERVHLH
HNPWDCNCDILWLSWWLKEMVPANTSCCARCSSPSNFKGRYIGELDQNYFHCYAPVIVEP
PADLNVTEGSAAELKCRASSLTSVSWITPNGSIMTHGAYKVRISVLNDGTLNFTNVTMQD
TGTYTCMVSNSAGNTTASATLNVSSTENSSFSYFTTVTVETIETPHNEGFTTTVQQKVGP
TPSAGTWETLSPTFTTTTTFRTPISTRATEKTYTISVTEGSLNGLDEVMKTTKIIIGCFV
AITLMAAVMLIIFYKMRKQHHQQNHHAPTRTIEIINVDEDCVTGGPGMEGHLTLPPLEHE
HLNHYNTYKTAYNHASTINSIHSSAHEPLLIRATSKDNVQETQI
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaagatgacctcctctcagcagcagcagatgatgcgaggtcctaggtggaac
cgggccttgtccgaccccttatttgtactgctccttgccttgcagctgctagtggtggca
ggactggtgcgtgctcagacgtgtccgtctgtttgttcctgtagcaaccagttcagtaaa
gtcatctgcacccgcaggggcttgcgagaagtacctgatggcatctctaccaacacgcgc
tacctgaatctgcaagaaaatctcattcaggttattaaggtggacagcttcaagcaccta
agacatttggaaattctacaactgagcaaaaaccacattcgcaaaattgagctaggagcc
ttcaatggactggccagtctcaataccttggagctttttgataatcgactcaccaccatc
ccaaacggtgcatttgaatacctttccaaactaaaagaactttggcttaggaataaccca
atagagagcattccatcttatgctttcaacagagttccctcattacgaagactcgacctt
ggggagcttaaacgactctcctacatttcagagggagcctttgaaggactcagcaatcta
cgctacttaaatttgggaatgtgcaatctgaaggaaattcccaatcttactcctctggta
aagcttgatgaacttgagatgtctggaaaccagttatctattattcggcctggttcattt
aaagggcttatccacttgcaaaaattatggatgatgcatgctcagatccagaccattgaa
aggaactcatttgatgacctgcagtccctcgtggagctcaatttagcccacaacaacctt
acccttttgccccatgatcttttcactcctttacatcacctggagagggtgcacttgcac
cacaatccatgggattgcaactgtgacatcctctggctcagctggtggctaaaggagatg
gtaccagcaaacaccagctgctgtgctcgctgcagttcaccttcaaactttaaaggacga
tacattggtgagctggaccagaattactttcattgttatgctcctgttattgtggagcct
cctgcagacctaaatgtgacagagggaagtgctgcagagttgaaatgcagagccagctct
ttgacctcagtaagctggattacacctaatggttccattatgacacatggcgcatacaag
gtcagaatttcagtcctaaacgatggtacattaaatttcaccaatgttaccatgcaggac
acaggcacatatacatgcatggtcagtaattctgcaggtaatacaacagcatctgccaca
cttaatgtgtcttcaacagagaacagcagtttcagctactttaccacagtgacagtagag
acaatagaaacacctcataatgaaggcttcaccaccactgttcaacaaaaggttggcccc
acaccctctgctggtacatgggagactctttcacccacctttaccacaaccactacattt
cgaaccccaatctccacccgagcaacagagaagacctacacaatctctgtgacagagggc
tcacttaatggcttggatgaggtaatgaagacaaccaagatcatcattggctgctttgtt
gcaatcacacttatggcagctgtcatgctgataatcttctacaagatgcgtaagcaacac
caccagcagaaccaccacgcacccacacgcactattgagattattaatgtggatgaggac
tgcgtcactggaggcccaggaatggagggtcacctgactctgccacctcttgagcatgag
cacctcaaccactataacacctacaagactgcttacaaccatgcctctactatcaattcc
atacacagctcagcgcacgaacctttgttaattcgggcaacctcaaaagacaatgtgcaa
gagacccaaatctaa
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integrated database retrieval system
