| Entry |
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| Symbol |
polr1a
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| Name |
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
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| KO |
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| Organism |
kmr Kryptolebias marmoratus (mangrove rivulus)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:kmr00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
108240035 (polr1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:kmr03021]
108240035 (polr1a)
Enzymes [BR:kmr01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
108240035 (polr1a)
Transcription machinery [BR:kmr03021]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
108240035 (polr1a)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
LG9:complement(5968233..6003822)
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| AA seq |
1678 aa
MLFAKEVPWRRLEGMSFGMYSAEEIRKLSVKAVTNHRFLDAVGNVAPNSLYDLALGPADN
KEVCSTCCQDFNNCPGHFGHVDLPLPVYNPLFFDKLFLLIRGSCLACHMLTCSRSAIHLL
LNQLKLLDHGAMQEVYQIEHILNQHLEENPKTTGDEIERVLNEFTNMIVGANHEGSESSR
PIKHLVEKKSSLINDFWKVHLKPRKCPHCRSGRSTVRREHNSKLIVTMPSGPQTTNNTNE
DLMAGKKIYLTASTAREHINKVWQKEGFFLKCLFPGLEEEKGFYPDLFFLELLVVPPCRY
RPINRLGDQMFTNGQTVNMQAVMKNCGVIRKLLALIAGEKNTEEAEAVEPDDQTFLSGIV
GHSLPDKLYNMWIHLQSHVNIVFDSDMDKLMTEKYPGIRQILEKKDGLFRKHMMGKRVDY
AARSVICPDMYIETNEIGIPMVFATKLTYPQPVTPWNVKELRQAVLNGPSVHPGASIVIN
EDGRKTILSATNFAQREAVAKELLTPSPGPHKMTMKIVNRHIKNGDVLLLNRQPTLHRPS
MQAHCARILPGEKVLRLHYANCKAYNADFDGDEMNAHFPQSELGRAEAYTLVSTNQQYLV
PKDGKPLAGLIQDHMVSGTKMTIRGCFFTRDQYTELVYRGLTDKAGRVKLLPPAVLKPQH
LWTGKQVVSTLLLNIIPEKAVPLNLVGKSKIPSKAWIQVPPRAAPGYKPDSMCDSQVVIR
QGELLVGVLDKAHYGSSAYGLVHCCYELYGGESSGKLLSCLARLFTAYLQLYRGFTLGVE
DILVKPGANMQRKKIINESLEIGTKALQAAFNLQPDVDPAEARSRWQDAHLNPDQRDFSM
ADHKFKEVANQVNNEINKVCMPVGLHTSFPDNNLQLMVQSGAKGSTVNTMQISCLLGQIE
LEGRRPPLMPSGKFLPCFQPYDPSPGAGGFVSGRFLTGIKPQEFFFHCMAGREGLVDTAV
KTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYGEDGLDIPKTQFLQPRQFPFI
EDNYEVIRRAQGLDSVLAHLDPQSASRHFAAIKRWKAKRETACPRRGAFLLFSQKKLAKL
RETIQGAEATSNQDPAVLELVKQWHSLDEASRAKYCKKSSRCPEPSLGVFRPDVCLGSVS
ENFHDITEKYLQNKTSGKQDSVDSHSLRQLLHYKWQRSLCDPGEAVGLLAAQSIGEPSTQ
MTLNTFHFAGRGEMNVTLGIPRLREILMVASSNIKTPMMSVPVLSNKKALKRAKTLRKKL
SRVCLAEVLQKVDVVETLRIENHRKLRIFKVTFNFLPPDRYHDDKLLSPHQILRYMETRF
FHLLLEAVKKRTAKLASIAVETRKATLRDKDLDVDETAGTAGLDDGEGEEEGEIVDDQGD
EGDADASDAKRKSKQEEEVDYESEDEAEGDDAGDKEGQGEDETQENPESNTVEESQPESA
ELKRRTRTETGEASSLQMRVNSVLQINPAIEKYSFDQQQELWCEVELALPVNKVHFDLTS
ILSALAQNAVIMETKGLTRCLLSETTTRSGEKRTVLNTEGINMHEIFKYSDILDINRLYS
NEVHTMAKTYGIEVALKVIEKEIKDVFAVYGIEVDPRHLSLVADYMCFEGVYKPLNRHAI
QSNSSPLQQMTFETSYKFLKQATMLGSHDQLVSPSACLVVGKVVKGGTGLFELKQPLQ |
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| NT seq |
5037 nt +upstreamnt +downstreamnt
atgttatttgctaaagaggtaccatggcggcgcttagagggcatgtcgtttggcatgtac
tcagccgaggagataaggaaattgagtgtgaaggctgtgactaaccacaggtttcttgat
gcggttggaaatgtggcccctaacagcttgtatgatctggctctggggccagcagacaac
aaggaggtttgttcaacctgctgccaggatttcaacaactgtccggggcacttcggacac
gtagatttgcctttacctgtgtacaacccactgttctttgataaactcttcttgttgatc
cgtggttcgtgtctggcgtgtcacatgttgacgtgctcccgaagtgccatccacctgctg
ctgaaccagctcaagctactggaccatggagccatgcaggaagtctatcaaattgaacac
attctgaaccagcacctggaggagaaccctaaaaccacgggagacgagattgagcgagtg
ctgaacgagtttacaaacatgatagttggagcgaaccacgaaggttcagaaagctccaga
cctattaaacacctggttgaaaagaagagcagcctcataaatgatttctggaaggttcac
ctgaaacctcggaagtgtcctcactgcaggagtggcaggtctacggtgcgacgtgaacac
aacagtaagctcatcgtcaccatgccctcaggaccacaaaccaccaacaatacaaatgaa
gatctgatggccgggaagaaaatctacctgactgccagtacagctcgagaacacatcaac
aaagtgtggcagaaagaaggtttcttcctgaagtgtctgtttcctgggctggaggaggag
aagggtttctatccagacctcttcttcctcgagctgctggtggtcccgccctgcaggtat
cgtccaatcaatcgactgggtgaccagatgtttaccaacggtcagaccgtcaacatgcag
gctgtgatgaagaactgcggagtcatcagaaaactcctggctctcatcgcaggagagaaa
aataccgaggaggcagaggctgtagagccagacgatcagacctttctttctgggattgtt
ggacattcattaccagataaactctacaacatgtggatccacctgcagagccacgtcaac
attgtctttgacagcgacatggacaagctgatgacagagaaatatcctggaattagacag
atccttgagaaaaaagacggactgttccggaaacacatgatggggaaacgagtggactac
gccgcacgatcggtcatttgtcctgacatgtacatcgaaacaaacgagataggaatacct
atggtttttgccaccaagctgacgtaccctcagccagtcacaccgtggaacgtaaaggag
ctccgtcaggccgttctaaatgggcccagcgttcaccccggcgcctccattgtgataaac
gaggacggcagaaagaccatcctatcagccaccaacttcgcacagagggaagcggttgcc
aaggagctgctgacgccctctccgggtccacataagatgaccatgaagatagtaaatcgt
cacataaagaacggagacgttctgttactgaacagacagccgactctgcacagaccctcc
atgcaagcccactgcgctcgcatcttaccaggagagaaggtgctgaggctccactatgca
aactgcaaggcgtacaacgctgattttgatggagacgaaatgaacgctcacttccctcag
agtgagctgggccgagcagaagcctacacattagtcagcactaaccagcagtacctcgtc
cccaaggatggtaaacccttagcaggtctgatccaggaccacatggtgtcaggaacgaag
atgacgatacgaggctgcttcttcaccagagaccagtacaccgagttggtgtacagagga
ctgactgacaaagcaggcagagtgaagctgctgcccccagccgtcctcaaaccgcagcat
ctgtggaccggaaagcaggtggtgtccacattgctgctgaatatcatcccagagaaagcc
gtgcctcttaacctggttggaaaatccaaaatccccagcaaggcgtggattcaggtccca
ccccgagctgcacctgggtacaaaccggacagcatgtgtgactcacaggtggtgattcgt
cagggggagctgttggttggggttctggacaaagctcactatggttcctcagcctacggt
ttggtccactgctgctatgagctttacggaggggagagcagtggaaaactgctcagctgc
ctggctcgactcttcacagcgtacctgcagctgtacagaggcttcactctgggtgtggaa
gacatcctcgtcaaacctggtgccaatatgcagaggaagaaaatcattaatgaatcactg
gagatcggcaccaaagccctccaggcagcgttcaacctgcagcctgacgtggatccagct
gaagctcggagccgctggcaggacgctcacctcaaccccgaccagagagacttcagcatg
gccgaccacaagttcaaagaagtggccaaccaagtgaacaacgagattaacaaggtgtgt
atgccagtcggactgcacacttctttcccagacaacaacctgcagctcatggtccagtca
ggagccaagggctccacagtcaacaccatgcagatctcatgtctgcttggtcagattgaa
ctggagggccgcaggcctccactgatgccttctgggaaattcctgccgtgcttccagcca
tatgacccctcacccggtgccgggggctttgtttctggaaggtttctcacaggaatcaaa
cctcaggagtttttcttccactgcatggctggaagagaaggactggtggacacagctgtg
aaaacatcccgatcaggatatctgcagagatgcatcataaagcatctggagggtttggtg
gtgcagtacgacctgactgtgagggacagcgacggatctgtggtccagttcctgtacggt
gaggatgggctggacatccccaagactcagtttctgcagccgagacagttccccttcata
gaagacaactatgaggtcatcaggagggctcagggcctggacagcgttctggctcatttg
gacccgcagagtgccagtcgccactttgcagccatcaaacgctggaaagcaaagagagag
acggcgtgtcctcggagaggagcgttcttgctcttttcccagaagaagttggcaaaacta
agagaaactattcaaggagcagaggccacctctaaccaagatcccgctgtactggagctg
gtgaagcagtggcactctctggatgaggcgagcagagcgaaatactgcaaaaagtcctcc
cgctgcccagagccctcactgggcgtgttcaggcccgacgtctgcttagggtccgtgtct
gaaaactttcacgacatcacagagaaatacctccaaaacaaaaccagtgggaaacaggat
agcgtggactcccacagccttcggcagctgcttcactataagtggcagcgttcgctgtgt
gatccgggtgaagcagtgggtctgctggcagctcagtccataggcgaaccctccacccag
atgaccctcaacaccttccacttcgccggcagaggagagatgaacgtcactttaggaatc
cctcgtctgagagagatcctgatggtggccagttccaacatcaaaacccccatgatgagc
gtcccggtgctgagcaacaagaaagccctgaagagagccaaaacgctgcggaagaagctc
agcagggtgtgcctggctgaggtgctgcagaaggtggatgtcgttgaaacgctgcggatt
gaaaatcatcgaaagctgcggattttcaaagttacctttaacttcctgcctcctgatcgt
taccacgatgacaagctgttatctccccaccaaatccttcgctacatggaaacaaggttt
ttccatctcctcctcgaagcagttaaaaagcgcacagccaagctggcctccatcgccgtg
gagacgaggaaggccactctcagagacaaagaccttgatgtggatgagacagccggcact
gctgggttagatgatggagagggagaggaagagggagagattgttgatgaccagggggac
gaaggagacgccgatgcatctgacgccaagaggaaaagcaaacaggaggaggaggtggac
tacgaaagcgaggatgaagctgagggggacgacgccggagataaggagggtcagggggag
gacgagacccaggagaaccccgagtccaacaccgtggaggagtctcagcccgagtctgca
gaactgaagagacgaacaaggacagagacaggagaggcgtcctcgctccagatgagagtg
aattctgtcctgcagataaacccggcgatagagaaatattcttttgatcagcagcaggaa
ctctggtgtgaggtggaactggctctgcctgtgaacaaggtgcacttcgacctgacctcg
attctgtcagcgctggcccagaacgcagtcatcatggaaaccaagggtctgacccgctgc
ctgctgagcgagaccacgacgaggtccggagagaaacggacggtcctcaacacggaggga
atcaacatgcacgaaatattcaaatacagtgatatcttggacatcaacagactgtactcc
aatgaagttcacaccatggctaagacttacgggattgaagtggctctgaaagtcatagag
aaggagatcaaagacgtttttgccgtttacggtatcgaggtcgaccccaggcatctgtcg
ctggtggcagattacatgtgctttgaaggtgtatacaagcctttaaaccggcacgccatc
cagtccaactcgtctcctctgcagcagatgaccttcgagacgagctacaagttcctcaaa
caggccaccatgctggggtcacatgatcagctggtgtctccctcggcctgcctggtggtg
ggaaaggtcgtcaaaggaggaacaggactgtttgaactcaagcaacctctgcagtag |
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