Kryptolebias marmoratus (mangrove rivulus): 108240183
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Entry
108240183 CDS
T05608
Symbol
cyfip1
Name
(RefSeq) cytoplasmic FMR1-interacting protein 1 homolog
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04810
Regulation of actin cytoskeleton
kmr05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
108240183 (cyfip1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108240183 (cyfip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmr03019
]
108240183 (cyfip1)
Messenger RNA biogenesis [BR:
kmr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
108240183 (cyfip1)
Factors involved in mRNA localization
Other mRNA localization factors
108240183 (cyfip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Cypovirus_WIV_4
Spore_SspJ
Motif
Other DBs
NCBI-GeneID:
108240183
NCBI-ProteinID:
XP_017278913
UniProt:
A0A3Q3BAR0
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All DBs
Position
LG24:complement(19960670..19994739)
Genome browser
AA seq
1253 aa
AA seq
DB search
MTSAVTLEDALSNVDLLEELPLPDQQPCIEPLPSSLIYQPNFNTNFEDRNAFVTGIARYI
EQATVHSSMNDMLEEGQEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMNFMYFQRTAIDRFCGEVRRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMSEPSSIQESQNLSMFLANHNKITQSLQQQLEVINGYEELLAD
IVNLCVEYYENKLYLTPSEKHMLLKVMGFGLYLMDGNSSNIYKLDAKKRINLTKIDKFFK
QLQVVPLFGDMQIELSRYIKTSAHFEENKSRWTCTSISSSPQYNICEQMIQIREDHMRFI
SELARYSNSEVVTGSGRQEAQKTDSEYRKLFDLALQGMQLLSQWSAHVMEVYSWKLVHPT
DKYSNKECPDNAEEYERATRYNYTSEEKFALVEVIAMIKGLQVLMGRMESVFNHAIRHTI
YSALQDFSQVTLRDPLRQAIKKKKNVIQSVLQAIRKTVCDWETGREPHNDPALRGEKDPK
GGFDIKVPRRAVGPSTTQLYMVRTMLESLIADKSGSKKTLRSSLEGPTILDIEKFHKESF
FYTHLLNFSETLQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEASM
MEYVLYPLDLYNDSAHYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAHYKILAGS
LLLDKRLRSECKNQGANIPWPASNRYETLLKQRHVQLLGRSIDLNRLITQRVSAALHKSL
ELAINRFESEDLTSVMELEGLLEINRLTHKLLSKFVTLDSFDAMFREANHNVSAPYGRIT
LHVFWELNYDFLPNYCYNGSTNRFVRTILPFSQAFQRDKPPNAQPHYLYGSKTLNLAYTS
ICSSYRNFVGPPHIKAMCRLLGYQGIAVVMEELLKVVKSLLQGTILQYVKTLMEVMPKIC
RLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQNLREVGNAILFCLLSEQSLSQEEVC
DLLHAAPFQNILPRVHVKEGERLDAKMKRLEAKYTALHMVPLIERLGTPQQIAIAREGDL
LTKERLCCGLSMFEVILARVRGFLDDPIWRGPLPSNGVMHVDECVEFHRLWSAMQFVYCI
PVGAHEFTVEQCFGDGLHWAGCMIIALLGQHRRFDILDFSYHLLKVQKHDGKDEVIKSVP
LKKMVDKIRKFQVLNDEIFAILNKYLKSGDGENMPVEHIRCFQPPIHQSLASS
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccgcagtgactttagaggacgccctgtccaacgtggacctgctggaggagctg
ccgctcccggaccagcagccatgcatcgagcccctcccctcctcgctcatatatcagccc
aacttcaacaccaacttcgaggaccgaaatgcgtttgtcaccggcatcgccagatacatt
gagcaggccaccgtccactccagcatgaacgacatgctggaggagggccaggagtacgct
gtcatgctttacacctggaggagctgctcacgtgcaataccacaggtaaagtgcaatgag
cagcccaaccgagtggagatctatgagaagactgtggaggtcctcgagccagaagtcacc
aagctgatgaacttcatgtacttccagcgcacggccatcgatcgtttctgcggggaggtc
cgtcggctgtgtcacgccgagcgcaggaaggactttgtctccgaggcgtacctgctgacc
ctggggaagttcatcaacatgtttgcggtgctcgatgagctgaagaacatgaagtgcagt
gtcaagaacgaccactctgcgtacaaacgagccgctcagttcctcagaaagatgtctgaa
ccgtcctccatccaggagtcccagaacttgtccatgttcctggcaaaccacaacaaaatc
actcagtcgctgcagcagcagctggaagtgattaacggatatgaagagctgctggcggac
atcgtcaacctgtgtgtggagtactatgagaacaagctgtatctcactcccagtgagaaa
cacatgcttctcaaggtgatgggcttcggcttgtacctcatggatggaaacagcagcaac
atatataaactagatgccaagaagagaatcaacctcacaaagattgacaagtttttcaag
caacttcaagtggtcccgctgtttggtgacatgcagatcgagttgtcccggtacattaag
accagcgctcactttgaagagaacaaatccaggtggacctgcacttctatatccagcagc
ccccagtacaacatctgtgagcagatgattcaaatcagggaggaccacatgcgcttcatc
tctgagctcgctcgctacagcaacagtgaggtggtgactggatcagggcgtcaggaggcc
cagaagactgattcagagtacaggaagctgttcgacttggccctgcagggcatgcagctg
ctctcccagtggagcgctcacgttatggaagtgtactcgtggaaactggttcacccgacg
gacaaatactcgaacaaagagtgccccgacaatgctgaggaatatgagagggccactcgc
tacaactacacgagcgaggagaagttcgccctcgtagaggtgatcgctatgataaaggga
ctgcaggtgctgatgggacgcatggagagtgtgtttaaccacgccatccgccacaccatc
tactcggctctgcaggacttttcccaggtgactctgcgtgacccgctgaggcaggccatc
aagaagaagaagaacgtcatccagagcgtccttcaagccatccggaaaacggtctgtgac
tgggagactggccgggagccgcacaacgacccggctctccgcggagagaaggatccaaag
ggaggatttgacattaaggttcctcgtcgagccgtggggccctccaccacacagctctac
atggtgaggaccatgctggagtctcttattgctgacaaaagtggctcaaagaagactctg
cgcagcagcctcgagggccccaccatcctggacattgaaaagtttcacaaggagtccttc
ttttacacacacctgctgaacttcagcgaaactttgcagcagtgctgtgacctctcccag
ctctggttcagggagttctttctggagctcactatgggccgcaggatccagttccccatc
gagatgtccatgccgtggatcctcaccgaccacattctggagaccaaggaagcttccatg
atggagtatgtgttgtatcctctggacttatacaacgacagcgcacactacgctctgacc
aaattcaagaagcagttcctttatgatgaaattgaggccgaggtcaacttgtgcttcgat
cagtttgtctacaagctggctgatcagatatttgcccactacaagatactagctggaagt
cttctgcttgacaaacgtttaaggagcgaatgcaagaaccagggggccaacattccctgg
cctgcctccaatcgctacgagactctgctgaagcagcgccacgtccagctcctgggccgc
tccattgacctaaaccgactcatcactcagagagtttcggcagctcttcacaaatctctg
gagctcgcaatcaaccggtttgagagtgaggacctcacctcagtaatggaactggagggt
cttctggagatcaaccgcttgacgcacaaactcctcagtaagtttgtgaccctggacagc
ttcgacgccatgttccgcgaggccaaccacaacgtgtcagccccgtacggcaggatcact
ctccatgtcttctgggaactcaactatgacttcctgcccaactattgctacaatggttca
accaacaggtttgtccggaccatcctgcctttctctcaggcgttccagagggataagcct
cccaacgctcagcctcactatctgtacgggtcaaagaccctgaacctggcatacaccagc
atatgtagctcctacaggaactttgtgggccccccacacattaaagccatgtgcagactg
ctgggctaccagggcatcgccgtggtgatggaggagctgcttaaagtcgtcaagagcctg
cttcagggaaccatattgcagtatgtgaagactctgatggaggtgatgcccaagatttgc
aggcttccacgccacgagtatggctctcccgggattctggagttcttccaccaccagctg
aaggatattgttgagtacgctgagctcaagacggtgtgtttccagaacctgagggaggtg
ggaaacgccatcttgttctgcctgctgagtgagcagagtctgtcgcaggaagaagtttgt
gatttgctgcacgctgcaccgttccagaatattcttcccagagttcatgtcaaagaaggg
gaacgcctggatgccaagatgaagcgcttggaggccaaatacacagcgctgcacatggtc
ccactcatagagcgccttggaaccccacagcaaatagccattgcgcgtgaaggtgacctg
ctgaccaaggagaggctgtgctgcggtttgtccatgttcgaagtaatcctcgcgcgtgtg
cgaggcttcttggacgaccccatctggcgcgggccgttgcccagtaacggtgtgatgcac
gtggacgaatgcgtggagttccaccgcctctggagcgcaatgcagtttgtgtactgcatc
cccgtgggagcgcacgagttcacagtggagcagtgcttcggagacggcctccactgggcg
ggctgcatgatcatcgctctcctgggccagcacaggcgcttcgacatcctcgacttcagc
tatcacctcctcaaggtccagaaacatgacggcaaagatgaggttatcaagagcgtgcct
ctgaagaagatggtggacaaaatccgcaaattccaggtcctcaacgatgagatcttcgcc
atcctgaacaagtacctgaaatcaggagacggggagaacatgccggtggaacacatccga
tgcttccagcctccgatccaccagtcacttgccagcagctga
DBGET
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