Kryptolebias marmoratus (mangrove rivulus): 108240192
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Entry
108240192 CDS
T05608
Symbol
sh3rf1
Name
(RefSeq) E3 ubiquitin-protein ligase SH3RF1 isoform X1
KO
K12171
E3 ubiquitin-protein ligase SH3RF [EC:
2.3.2.27
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
kmr01009
]
108240192 (sh3rf1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
kmr04121
]
108240192 (sh3rf1)
Enzymes [BR:
kmr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108240192 (sh3rf1)
Protein phosphatases and associated proteins [BR:
kmr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108240192 (sh3rf1)
Ubiquitin system [BR:
kmr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108240192 (sh3rf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_1
SH3_9
SH3_2
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_5
zf-C3HC4_3
zf-RING_4
zf-C3HC4_4
zf-RING_11
Prok-RING_4
zf-Nse
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
108240192
NCBI-ProteinID:
XP_017278944
UniProt:
A0A3Q3AN80
LinkDB
All DBs
Position
LG24:complement(18185785..18219530)
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AA seq
845 aa
AA seq
DB search
MDESVLLDLLECPVCLERLDASAKVLPCQHTFCRRCLQGILGSRGELRCPECRTLVECAV
DELPSNILLVRLLDGIKQRPRRAGSGAGVCTNGTSGAVARAHGSGTREQGTPGAQPQRTQ
STAVRGVSQLPCAKALYNYDGKEPGDLKFTKGDIIILRRQVDENWYHGEMGGVHGFFPTN
FVQVIKPLPQPPPQCKALYDFELKDKEADKDCLPFSKDDILTVIRRVDENWAEGMLGDKI
GIFPISYVEFNSAARQLIELDKPSDSSGDSGEGASLGPQSNGAQRAGEKKNSKKRHSFTS
LTMSHKPMLAPPPQRHSMEISGPVLISSSNPTAAARIGEISGGLSSSAPSQVHICTTGLI
VTPPPSSPVTTATVFTFPSESSYTSIALDALPPPPPPPPQASVSGAAYSVAAGQRPSPSS
GDQSGRQRPTVYVAMFPYTPRKEDELELRKGEMFLVLERCQDGWFKGTSMHTGKIGVFPG
NYMSPVSRTASGSSQSKVSMSLCTQAGRGITIVSPSSAPLGAIVQGPDFNKPLTVCSTAG
PPCSQPAAVVTAAQTATGQQPKVPLHVSSQMTVNQARNAVRTAACHSQDRPTVAVTPIQC
ATPVTYVPQPSSSAAQGCTRAGVALSCATISLTPPNVNAASLDVDALRPVPVGNSAALNP
SSNNAACRLDKDGKREKKSLLKLLSSNKKKSRPSPPSSPTLEGEQAAAGEVLHGAVGPDT
APPSGSLSCLESEPAAATSSSSSFSPPVPEPSHRKSSPLDGCAPIAPPPRQPCSSLLSQQ
HDARPIICERYRVVVSYPPQSEAELELKEGDIVFVHRKREDGWFKGTLQRNGRTGLFPGS
FVDSI
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atggatgaatcagtgctgttggatttgcttgagtgtcccgtgtgcctggagcgtctggac
gcctctgccaaggttctcccctgtcagcacaccttctgccgcagatgcctccaaggcatc
ctgggctcacgcggggagctgcgctgcccggagtgccgcacgttggtggagtgcgccgtg
gatgagctcccgagcaacatcctcctcgtgcgcctgctggatggcatcaagcagaggcct
cggagggccggctccggggctggagtctgcacaaacggcacgtccggagctgtggccagg
gcgcatggcagtggaacgagggagcagggcacgccaggggcgcaacctcagcgcacccag
agcaccgctgtccggggtgtctcacagctcccttgtgccaaagcgctgtacaactatgat
ggcaaggaaccaggagatctcaaattcaccaagggcgacatcattatcctgcgccggcaa
gtggatgagaactggtaccacggggagatgggtggagtgcatggcttcttccccactaac
tttgtccaggtcattaagccgctgccgcagccgccgcctcagtgcaaagctctctacgac
tttgagctcaaagacaaagaggccgataaggactgtctgcccttctctaaggatgatatc
ctgactgtaattcgtagagttgatgaaaactgggcggagggaatgctgggagataaaatt
ggaatttttcccatctcatatgtggagttcaactctgcagctcgtcagcttatagagttg
gacaagccgtcggactcgagtggagactccggtgaaggggcctccttggggcctcagagc
aacggtgcccagcgggcaggggagaagaagaacagcaagaaaaggcattccttcacttct
ctcactatgtcccacaaacccatgctagctcctcccccacagcgccactccatggagatt
agcgggccggtcctcatcagctccagcaaccccacagcagccgctcggatcggagagatt
agcggggggctctccagcagcgcaccttcacaggtccatatttgcacaaccggactaatt
gtgaccccaccccctagtagtcctgttaccacagcaacggttttcacgtttccctcagag
tcgagctacacatccattgctttggatgctctcccgccacccccacctcctcccccgcag
gcctccgttagcggagcagcgtattcggtagctgcgggacagagaccctcccccagctcg
ggcgaccaaagtgggagacaaagacctacagtctatgtggcaatgttcccatacactccc
cgtaaggaggatgagctggagctgaggaaaggagagatgtttctggtcctggagcgctgt
caggacggctggttcaagggcacctccatgcacacaggcaagattggagttttccccggg
aactacatgagtccagtcagcaggacagcgtcgggcagctcccagtccaaagtttccatg
agtctgtgcactcaggctggcagaggaatcaccatcgtcagcccttcctctgctcctctg
ggggccattgttcaaggacctgacttcaacaaacccctcaccgtgtgctccaccgcagga
cctccctgctcccaacctgcagctgtggtaacagcagctcagacagccacaggccagcag
ccaaaagtgcccctacacgtcagctcacagatgactgtaaatcaggctcgcaacgcggtc
agaacagcagcctgtcacagtcaggacagacctacagtagcagtgacaccaatccagtgt
gcaaccccagtgacctacgtcccacagccttcctccagcgccgcccagggctgtacccgg
gcaggagtggcactgagctgcgccactatctctctgactccacctaatgtgaacgctgca
tctctggatgtggatgctttaagacccgtgcccgttggcaacagcgctgctctcaatccc
tcatctaacaatgcagcctgtagactggacaaggatggcaagagagaaaagaagagtctc
ctgaagctgttgtcctccaataagaagaagtctcgtccttcccccccctcctctcccacc
ctcgagggggaacaggctgcagctggagaggtgctgcatggagctgtgggccccgacacc
gcccctccctccggctctctcagctgcctcgagtctgaacctgctgctgctacttcgtca
tcctcctccttctcccccccagtccctgagccctcccatcggaagagcagtccacttgac
ggatgtgctcccatcgcgcccccccctcgtcagccctgctcctctcttttatcacaacag
cacgatgcacgtcccatcatatgtgagaggtacagggtggtggtatcatatcctccgcag
agcgaggccgagctggaactcaaagagggggacattgtgtttgtccacaggaagagagag
gacggctggttcaaaggcacgctgcagaggaacggcaggaccggcctgtttcccggcagc
ttcgtggacagcatctaa
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