Kryptolebias marmoratus (mangrove rivulus): 108240252
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Entry
108240252 CDS
T05608
Symbol
irx6a
Name
(RefSeq) iroquois-class homeodomain protein IRX-6a isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kmr03000
]
108240252 (irx6a)
Transcription factors [BR:
kmr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
108240252 (irx6a)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
UIM
Motif
Other DBs
NCBI-GeneID:
108240252
NCBI-ProteinID:
XP_017279086
UniProt:
A0A3Q3B243
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Position
LG15:complement(15396913..15402315)
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AA seq
508 aa
AA seq
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MVTKEAAMSFSQFGYPYNATSQFFVSANPSSTCCDSISRSVSDGTGGSQTSAAAAAAASF
CCPSYENRLLASSRTELNAALGMYSSPYAAAAAASQNYANYFPYSTDPSAIYSSLNPQYD
IKDTTGTLHSGITQTAAYYPYDHSLGQYQYDRYGTVDFNGTARRKNATRETTSTLKTWLY
EHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWSPKNKASDDRKEDL
NKSDQECVTKDSPDCKEEKDLHLSDLEDMDEDDCDKLDSDCEKVAADEQDLQRAMAVSRA
PQKRDCGSELHLTLNNNFHSFPCAIKNVTALPPLPSDFLDPVVSKAASLTIPSAGTVSLS
HFEASDKPRIWSLARTAASGVILSPQQHGSELRTGSLTGDCQLQSTRLSGAPTGQCGVTR
GLHDSGGTEGSFPEGSSLHSKVYGTSSYNHKSLQLHSSSYTAVPDTCQYTSIEGFSGGKV
EIQSSDLSEACGTVQDDKVTAFRPVMKR
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggtaacaaaggaagcagctatgtctttctcgcagtttggatacccttacaatgcaact
tcacagtttttcgtgtcggcaaaccccagttccacttgctgcgattcgatttccaggtcg
gtctctgacgggacaggcggctctcagacctccgccgccgccgcagccgccgcctccttc
tgctgcccgtcctacgagaaccggctcctggcgagcagccggacggagctgaacgcagcg
ctggggatgtacagctctccgtacgccgcagcggccgcagccagccagaactacgccaac
tacttcccctacagcaccgacccatccgctatctactcctctctgaatccacaatatgac
attaaggacaccacaggcactttacactctggcattactcaaactgctgcttactatccg
tacgatcattcattgggacagtatcaatatgacagatacgggacagtggactttaatggc
acagctcggagaaagaatgctactcgtgagaccaccagcactttgaaaacatggttgtat
gagcaccgcaagaacccctaccccaccaagggtgaaaagatcatgctggccatcatcacc
aaaatgaccctcacccaggtgtcaacgtggttcgccaacgccaggaggaggctaaaaaag
gagaacaagatgacctggtcgccaaagaataaggcaagtgatgacaggaaggaggacctt
aacaagagcgaccaagagtgtgtcaccaaagattcccctgattgcaaagaggagaaagat
ctgcatctgagtgacttggaggacatggacgaggatgactgtgacaagctggacagtgac
tgtgaaaaggtggcagcggacgagcaggacctccaaagagccatggcagtgtccagagct
cctcaaaaaagagactgcggctctgagctgcacctgaccttaaataacaacttccactcg
ttcccctgtgccatcaaaaatgtcaccgccctcccccctctcccatctgactttctggat
cctgttgtgtctaaggcagcctctttgaccatcccatcagcgggaacagtgtccctgtct
cattttgaagcatcggacaagccacggatttggtctctggctcgaacagcagcttcaggg
gtcatactgagcccccagcagcatggctcagagctgaggacaggaagcctcactggagac
tgtcagctacagagcaccaggctttctggggctcctactggacaatgtggggtcaccaga
ggcctccatgattctggcggcaccgagggctcattccctgagggctcgtccttgcactcc
aaagtttatggcacaagcagctacaatcacaagagcctccaacttcacagttcatcctac
actgctgtcccagacacatgtcagtacaccagtattgaaggattctctggaggcaaagtg
gagattcagtcgtccgacctcagtgaggcctgtgggactgtgcaggatgacaaggtcact
gcattcagaccagtcatgaagaggtga
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