Kryptolebias marmoratus (mangrove rivulus): 108240261
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Entry
108240261 CDS
T05608
Symbol
chd9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
kmr03036
]
108240261 (chd9)
Chromosome and associated proteins [BR:
kmr03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
108240261 (chd9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
HTH_Hrp3
Chromo_MIT1
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
108240261
NCBI-ProteinID:
XP_017279097
UniProt:
A0A3Q3B1G3
LinkDB
All DBs
Position
LG15:15947916..16018929
Genome browser
AA seq
2998 aa
AA seq
DB search
MDFFDDPNLFVGGLEGLEEDGFSSAPSLVDELNLSADFEPLQVAALGPGKHQDMMPPASS
QQGLPSYNQPMAPYIGTKAQNSMGQAFSGSRSTGCGMIAEQHGQYHNATISQVPQSNGLF
CNSGSPMWGNQDQNGNVFHSLSQQQQQVCHPQMHNQQLHVRQHPQHHAGHPHHHHQQQEE
QQHRMRQQQLQQRHSHPQQLLNQHQQIGTPNVSLQQQQHHNFSFHQGGQASGHQQMHHSR
QQVQHPLPARELQFRSKSCLESQNASQSGTCLQTQQQQGSYQLLRRGQAFSGSGLEDSHL
SFPMHSSSVVHSLTTCSVSSANAYQAAEYPAYPGEPEIPSLSQQSLSSVSTCRPITTAPH
TSTVLGLSGETCQFQSPALMSQLHSRTAANQAEECPFRALRCPGETQGKSSEVFGEAVSC
YPSIASHLPSEQPLNCGAINTNGYQAFADSFLPSEAQDGDLDELDPPDLLPDLLPQLEED
LREQDKSRISWIESSQKNGHEDVKPTAFECKDEKPRKSTNGPGNQVRVLSPTLKSSSSSS
SSSSSSSSPSSSSEKRALRRKHHQMESALQDKQEKANRIISEAIAKARQRGEKNIPRVMS
PESFPSSSAQYKAHWDREHKGNGKARSKDKACRKACIVPSSKSKQKSKIGKIVIKIGKKK
KRKPASSEEESDDDPPPRHASKDADSKRRSNRQVKRKKYAEELEARLSDEDVKVIVKAKK
SNTAASKEPAVQLFVENPTEEDAAVVDKIMSFRIAKKEVSPGVMVEVEEFFVKYKNYSYL
HCEWATEQQLVKDKRIQQKIKRFKMKQAQRALFFTDMEEDPFNPDYVEVDRVLEVSYCED
KDTGEEVVYYLVKWCSLPYEDSTWELKDDVDQSKIEEFEQLQAVKPDSRRMERPPANLWK
KREQSREYRNGNTLRDYQLEGVNWLLFNWYNRRNCILADEMGLGKTIQSITFLEEIHRIG
IRGPFLIIAPLSTIANWEREFHTWTYLNVIVYHGSMISRQMLQQYEMYFRDAQGRVIRGA
YKFQAVITTFEMILGGCPELNAIEWRCVIIDEAHRLKNKNCKLLEGFKLMNLEHKVLLTG
TPLQNTVEELFSLLHFLEPARFPSENTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDV
EKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLAKGAGQANMPNLVNTMMELRKCCNH
PYLIKGAEEKILEDFREVYSPIAVDFHLQAMVQSAGKLVLIDKLLPKMKAGGHKVLIFSQ
MVRCLDILEDYLIQKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGIN
LTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGL
DKAVLQSMSGRDNSLGGGTGGGAVQQQLSKKEIEDLLRRGAYGAIMDEEDEGAKFCEEDI
DQILQRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWDKWAKKADIDMDMVNG
RNSLVIDTPRVRKQTRPFSATKDELAELSEGESDSDDTKPKLRRNDRPNSYGRTECFRVE
KNLLVYGWGRWKDILNHGRFKKQLTEWDVESICRSLLAYCLVHYRGDDKIKSFMWDLIAP
TEDGRTKELQNHLGLSAPVPRGRKGKKMKTQSSSFDIHKAEWLRKHNPEHMLQDDGYKKH
LKHHCNKVLLRVRMLYYLKQEVIGSQAQKVLDGVDSSEVKIWVPDPDHSELPALWWDAVA
DKCLMLGVFKHGYEKYHTIRADPTLCFLERVGRPDEKAIAAEQRGNDFMDGDVDDPEYKP
APALVKDDMEDDASSPGDLVVADNPGDAAPVTEGQTTYWPSPSVLTARLRRLITASQRFT
KSRQILHIHQVQSQSQQPMMLSTPLCPLPPTLNDTLNPKMVAKLERQQRWTRREEADFYR
VVSTFGVVFDPNLGRFDWTKFRAMARLHKKTDESLQKYLCAFTAMCRRVCRLPPKEGDSA
ADPSLTIQPITEERASRTLYRVELLRQVREQVLRHSLLFERLRLCQMSSDLPVWWEVGTH
DRDLLIGAAKHGVSRTDYHILRDPDLSFMASQRNYSQMKATPQQPRTTAPLLHPQFQAAS
SLMTGSPLPPPPQRDADPCGVVPKVEPASEDEEEAKERQRGSWSPPHPPATPTGLEEKPV
SMVSDSERQMVAARTKPLTPNSSERKPKKASKRGRREARRGSESDSDGSSSSSSSRSSSS
SSSSSSSSSHSGSSSSSSSSSCSSGSSSSSSSSSSSSDDSESEGEEAKKNVPVATSAKGF
DEDSVASLSTTLDETQDTHVAENGVSNSSSHPFQGGGYMLAASYWPKDRVIINRLDSICQ
AVLKGKWPGPRRVYEPGGAVASFYTTKLLDNANSLSEDPSASPQGSKVTKHVAENKEFSV
KLNDQEGGLKLTFQKQGLPMKRPLESEEGPHAQQQYLARLHELQSASDTGLADITKPQSS
FQTVPPALTDQMRLNGALDGQPLVKKRRGRRKNVEGVDLLFMNRNQAPTAPNQAASGWGG
IGQVGLAGAAMPGSSQSSGQVSADTETRVPVINLKDGTRLAGDDAPMRKDLELWLKEHPG
FVADTGAFIPGVNKMQMQFHFQDGRPKQKRHRCRNPNKIDVNSLTGEERVQIINRRNARK
VGGAFAPPLKDLCRFLQENPEYGVPPEWADVVKQSGYLPESMFDRILTGPIVPEEVSRRG
RRPKNPLAKAAAPSPAASALGLNPLLNNGLLSGMDLSSLQAFQQNLQSLQSLQLTANLMG
LPSDASNLAASNLAAMFPMMLSGMAGLPNLLGMSTLIGKPAQEGAGGSEERTKGTGEQSN
APSHTSDTKGERTEGSSMTPSSTSSCASSATTTQSASAASAASSHSLSLNPLLLSSMLYP
GMLLTPGLNLPVSATQPQSSNGEPSSLPPAAAPPPPPATSLSSPKETELPQAQRDGEEDD
DETPEEALDEDEEEEEEEETADQKENSGPESSVKAESSSSESGSSSSSSDDSDSSDED
NT seq
8997 nt
NT seq
+upstream
nt +downstream
nt
atggacttctttgacgaccccaacctctttgttggaggtttggaagggctggaggaggat
ggcttctcttcagcaccgtcacttgtggatgagctaaatctcagtgctgactttgaaccc
cttcaagtggcagcacttggcccagggaagcatcaagacatgatgccaccagcctcttct
caacaaggtttacccagttacaatcagccgatggctccatacattggcacaaaggcacaa
aattctatggggcaagcattttctggttctcgtagcacggggtgtggcatgattgcagag
caacatggccagtaccacaacgccaccattagccaagtacctcaatccaatgggttgttc
tgcaacagtggaagtccaatgtggggcaaccaagaccaaaatggaaacgtgttccactct
ttgtctcaacaacagcaacaggtttgtcatccacaaatgcacaaccaacaacttcatgtc
agacaacatcctcagcaccatgctggccatcctcatcatcatcatcagcagcaggaggag
cagcagcacagaatgcggcagcaacagctgcagcaaaggcacagtcatccacaacagctg
ttaaaccagcaccaacaaattggcacaccgaatgtttccctgcagcaacagcagcatcac
aatttctcctttcaccagggaggtcaagccagcgggcatcagcaaatgcaccattctcgg
cagcaggttcagcatccgctacctgcaagagagctacagtttcgctccaagtcttgtttg
gaaagtcagaatgcatctcagagtgggacctgcttgcaaacacagcagcagcagggtagc
taccagttgctcagaagaggtcaagccttctccgggtcaggactggaagactctcacctg
tcattccccatgcattcatcatctgtagttcactccctgacaacatgctctgtcagttct
gctaatgcttaccaagcagctgagtaccctgcctaccctggagagccagaaatacccagt
ctcagtcagcagtctttatcctcagtctcaacatgtaggcccatcaccactgcaccacat
acatctacagttcttgggctgtcaggggaaacatgtcagtttcaatccccagcactcatg
agccagctgcactctagaacagcagccaaccaggcagaggagtgtcccttcagagccctg
cgttgtcctggagaaacccagggaaagtcatctgaggtgtttggtgaagcagtgagttgc
tatcccagcattgcaagccacctgccctctgagcagcctctgaactgtggggctatcaac
actaatggctaccaagcttttgcagacagttttcttccgtcagaggcccaggatggagac
ttggacgagctggatccacctgacctcttgcctgacctgctgccccagctggaggaggat
ttgagggaacaggacaaatccaggatttcatggattgaatctagtcagaagaatgggcat
gaagatgtaaaaccaacagcttttgaatgcaaggatgagaagcctcgaaagagcaccaat
ggtcctggtaaccaggtacgagtcctcagtccaacgctgaagagttcttcatcctcctcc
tcttcatcttcgtcgtcatcctcacccagctcctcatcagagaaaagggcactacggagg
aagcatcatcagatggagtcagctctgcaggacaagcaggagaaggccaataggataata
tcagaagctattgctaaggcccggcagagaggggagaagaacatccctagggttatgagt
ccagagagcttccccagctcttcggctcagtacaaggcccattgggaccgtgagcataaa
ggaaacggcaaggctcggtccaaagacaaggcctgtaggaaggcctgcattgtaccctcc
tccaagtccaagcaaaaatccaagattgggaaaattgtcattaagattggaaaaaagaag
aaacgaaagccagcgtcttcagaggaggagtctgatgatgatcctccccctcgtcacgca
tctaaggacgccgactctaagaggcggtctaaccgacaggtgaagaggaagaagtatgct
gaagagctggaggccaggttgtcagacgaggacgtcaaggttatcgtcaaagccaagaaa
agcaacactgcagcatccaaggaacctgctgtccagctctttgttgagaatcccaccgaa
gaagatgcggctgttgttgacaaaatcatgtcttttcgtattgcaaagaaagaggtttct
ccaggggtgatggtcgaagtggaggagttctttgtaaaatacaaaaactattcctacctt
cactgtgagtgggccacagagcagcagctcgtgaaggacaagaggattcagcagaagatc
aaacgcttcaagatgaaacaggcacagagggcgctcttcttcacagatatggaagaggac
ccttttaaccctgactacgtagaggtggacagagtgttggaggtatcatattgtgaggac
aaagacacaggagaggaagtggtgtactacctggtgaagtggtgttcgctgccgtacgag
gacagcacctgggagttgaaggatgacgtcgatcagagcaagattgaagagtttgagcag
ctgcaggcagttaagccagactcgcgcagaatggagcggcctccagccaacctgtggaag
aagagggaacagtcaagggaatacaggaatggcaacaccctcagggattaccagcttgag
ggggtcaactggcttcttttcaactggtacaacaggcgcaactgcatcctggcagatgag
atgggcctgggaaagaccatccagtccatcacattccttgaagagatccatcgtatcggc
atcagaggccccttcctcataatcgcccccctgtctactattgcaaactgggagcgcgag
ttccacacctggacttacctcaacgtcattgtttaccacggaagcatgatcagcaggcag
atgctgcagcagtacgagatgtatttcagggatgcacagggccgtgtgatacgaggtgcc
tacaagttccaggctgttatcaccacgtttgagatgatcctgggaggctgtcctgagctc
aacgccatcgagtggcgctgcgtgatcatagacgaggcccatcgtctcaagaacaagaac
tgcaagctgctagaaggcttcaagctcatgaacctggagcacaaggtcctgttgacgggt
acccctctccagaacacggtggaagagctttttagcctcctccacttcttggaaccggca
cgcttcccctctgaaaataccttcatgcaggagtttggagacctcaagaccgaggagcag
gttcagaaacttcaggccatcctgaagcccatgatgctgcggcgtttgaaagaagacgtg
gagaagaagctggcccctaaggaggaaaccatcattgaggttgagctcaccaacatccag
aagaaatactaccgggccatcctcgagaagaatttctctttcctggcgaaaggagctggt
caggcaaatatgcccaacctggtcaacaccatgatggagctaagaaagtgctgcaaccac
ccctacctcatcaaaggggcagaagagaagatcctggaggacttcagggaagtctacagc
cctattgctgtcgacttccacctgcaggcgatggtgcagtctgccgggaagttggttctt
attgataaactgctgcctaaaatgaaggcaggaggacacaaggtgctcatcttctcccaa
atggtgcgctgcctggatatcttggaagactacctcattcagaaaaggtacttgtatgag
cgtattgatggtcgtgttcgcgggaacctgcgacaggctgctatcgaccgcttcagtaag
cccgactcggaccgctttgttttcctcctgtgcacaagagccggtggcctgggaatcaac
ctcactgctgcagacacctgcatcatcttcgactctgactggaacccacagaacgacctg
caggcccaggctcgctgccaccggatcggtcagaacaaagcggtgaaggtgtatcgtctt
atcaccaggaactcgtacgagcgtgaaatgtttgaccgcgccagcctcaagttgggcctg
gacaaagcagtgttacagagcatgagcggtcgagataacagcctgggaggaggcaccggg
ggaggggctgtgcagcagcagctgtccaagaaagagattgaggacctgttgcgacgcggc
gcctatggggccatcatggatgaggaggatgaaggggccaaattctgtgaggaagatatc
gaccagatcctgcagcgtaggacaaagaccatcacgattgagtcagagggacgaggatcc
acctttgctaaagccagttttgtagcatccggaaaccgcacagacatttctctggatgac
cctaatttctgggacaagtgggccaaaaaggctgacattgatatggacatggtcaatggc
agaaacagcttggtgatcgacactcctcgagtcaggaagcagacgagaccgttcagcgcc
accaaagatgagttagcagaactttcagagggtgaaagtgacagtgacgacaccaagccc
aagctgagacgaaatgatcggcccaacagctacggtcgcacagagtgctttagagtggaa
aagaacttgcttgtttatggctggggccgttggaaggatattctcaaccatggtcgtttt
aagaagcagttgactgagtgggatgtagagtccatctgcaggtccctgctggcttactgc
ctggttcattaccgtggcgatgacaaaattaagagcttcatgtgggacctaatcgctccc
actgaggatggacgcactaaggagctgcagaatcacctgggcttgtcagctccggtccct
cgaggcaggaagggtaagaagatgaagacccagtcgagctcttttgacatccataaggct
gagtggcttagaaaacataaccccgagcatatgcttcaggacgacggctacaagaagcac
ttgaaacaccactgcaacaaggtgctgctcagggtcagaatgctctactacctgaaacag
gaggtaatcggaagtcaggcccagaaggtgctggatggcgtcgactccagtgaggtaaag
atctgggtgccagatccggaccactccgagctgccagccctgtggtgggatgcagtcgcc
gacaagtgtctgatgctcggtgtcttcaagcacggttatgagaagtaccacactatccgc
gcagacccgaccttgtgctttttagagcgtgtgggacgaccggacgagaaggccatcgct
gccgagcagagaggcaacgatttcatggatggggatgtggatgatccagagtacaagcct
gctccagcccttgtaaaggatgacatggaggatgacgcctcctctcctggagatttagtg
gttgctgataatcctggagatgcagctccagtgacagaaggccagactacctactggccc
tccccctcggtgctgacagccagactgaggcgactgatcacagcctctcagcgcttcacc
aagagccggcagatcctccacatccaccaggttcagtctcagtcccagcagcccatgatg
ctgtctacgccactctgcccgctgccccccacactgaacgacactctaaatcccaagatg
gttgcaaagctcgaacgacagcaaagatggaccagaagagaagaggctgacttttaccgt
gttgtctcgacttttggggtcgtttttgacccaaacctcgggcgctttgactggaccaag
ttcagggccatggctcggcttcacaagaaaaccgacgagagcctgcagaaatacttgtgc
gctttcaccgccatgtgcagacgggtgtgtcgcctgccacctaaagaaggagactctgcg
gcggatccttccctcaccatccaaccaatcacagaggagcgagcgtctcgtaccctttac
agagtagagctgcttcgccaggtgagggaacaagtgctcaggcattcgttacttttcgaa
cgcctcaggctgtgccagatgagctcggacttgcctgtgtggtgggaggtcggtactcat
gaccgggacctgctaatcggtgctgcaaagcacggcgtcagtcggaccgactaccacatt
ctgagagaccctgacctcagcttcatggcttcacaacgcaactacagccaaatgaaagcc
acaccgcagcaaccacgcacaaccgcgccactcttgcaccctcagttccaggctgccagc
tcgctgatgacaggctccccgctgcccccaccccctcagagggacgcggacccctgtggg
gttgtgcccaaagtggagccggcctcagaggacgaagaagaggccaaagagaggcaaaga
gggagttggagcccccctcacccgccagcgactcccacaggtctggaagaaaagcctgtt
tccatggtgagcgacagtgagaggcagatggtggcagcacgaaccaaaccgctcaccccc
aactcctccgagaggaaacccaagaaggccagcaagagaggccgcagggaggccaggcga
ggctccgagtccgactcagacgggtcctcatcaagctcttcatcacgctcctcctcatct
tcatcatcatcctcttcttcatcatcacattccgggtccagctcctcgtcctcatcgtca
tcttgttcttccggctcctcatcctcatcctcatcctcctcatcctcatccgatgacagt
gaaagtgagggagaggaagcaaagaagaacgtgcctgtagcaacaagtgcgaagggcttt
gatgaggacagtgtggcctctttaagcactacactagatgaaacacaagacacccatgtg
gctgagaacggtgtctccaacagctcctcccatcctttccagggaggagggtacatgctg
gctgcgtcttactggccaaaggatcgtgtgattataaaccgcctggacagcatctgccag
gcggtgctcaaaggcaagtggccgggcccacgtcgggtctatgagcccggaggcgcagtg
gcctccttctacaccaccaagctgctcgacaacgctaacagcctgagcgaggacccctct
gcttcaccacaggggtcaaaggtgaccaagcatgttgcagaaaacaaggagttctcagta
aaactcaacgatcaggagggaggtctaaagctgaccttccagaaacagggtctgcccatg
aagaggcccctggagtctgaagaaggcccccatgcccagcagcagtatctggcccgcctg
catgagctgcagagcgcctcggacacgggcctggctgacatcaccaagcctcagagcagc
ttccagactgttcctcctgctcttactgatcagatgaggctgaacggagcactggatggt
cagcccctggtgaaaaagcgaagaggcaggagaaaaaatgtggaaggggtggacctgctc
tttatgaacaggaatcaagctcctactgctcccaatcaggcggcctcaggatgggggggg
attggccaagtgggcttagctggagctgccatgccaggatccagtcagagctccggtcag
gtctctgcagacacagagaccagggtccccgtcatcaacctcaaagatggcacccgcctc
gcaggggacgacgcccccatgaggaaagacctggaactgtggctgaaggagcaccctggc
tttgtggcagacacaggagcttttatccctggtgtaaataaaatgcaaatgcaattccac
ttccaggatggtcgacccaagcagaaaaggcaccgctgcaggaacccgaacaagatcgat
gtcaacagtctgaccggagaggagagggtccagataatcaacaggagaaacgcccgcaag
gtcggcggagcctttgctcctcctctcaaagatctgtgccgattccttcaggaaaaccca
gaatatggagtcccgcctgaatgggcggatgtagttaaacaatcgggttacctcccagag
agcatgtttgaccggatcctaacgggacccatcgttcctgaggaggtgagtcggcgaggt
cgtcgaccgaagaatcctctggcaaaggcggcggcgcccagcccggcggcctctgctctg
ggtttgaaccctctcctgaataacggcctcctctctgggatggacctcagcagtctgcag
gccttccagcaaaatctgcagagcttacagtccctgcagctcaccgcaaacctgatggga
ctcccatccgacgccagcaacctggctgcgagtaacctagcggccatgtttcccatgatg
ctttctggtatggcgggactgccaaacctgcttggcatgagcaccttgatcgggaagccg
gctcaggaaggcgcaggaggctctgaagagaggacaaagggaacgggagagcagtccaat
gccccctctcacacttctgacaccaaaggagaaaggacagagggctcgagcatgactcct
tcctccacttccagctgtgcttcctctgccaccaccacacaaagtgcttcagctgcctcc
gcagcctccagtcactcactctctcttaaccccttgttactctccagtatgctttaccca
gggatgcttctcactccaggccttaaccttcctgtgtctgccacacagcctcagagctcc
aacggtgagccttccagccttccccccgctgctgctcctcctcctccacctgcaacctcc
ctgtcatcaccaaaggagacggagctgcctcaggcacaaagggacggagaggaggacgac
gacgagacgccagaggaagctttggacgaagacgaagaagaagaggaggaggaggaaact
gctgatcaaaaagaaaacagtggtcctgaaagttcagtgaaagcggagtcgtcttcatca
gaatctgggagctcttcctcatcctctgatgattccgactccagcgacgaggactaa
DBGET
integrated database retrieval system
