Kryptolebias marmoratus (mangrove rivulus): 108240367
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Entry
108240367 CDS
T05608
Symbol
si:dkey-22o22.2
Name
(RefSeq) neural-cadherin
KO
K27892
neural-cadherin
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
kmr04515
]
108240367 (si:dkey-22o22.2)
Cell adhesion molecules [BR:
kmr04515
]
Cadherins
Cadherin related
108240367 (si:dkey-22o22.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Laminin_G_2
Laminin_G_1
Ig_Shg
CADH_Y-type_LIR
Cadherin_CELSR2_9th
EGF
Cadherin_2
Cadherin_pro
hEGF
He_PIG
EGF_Teneurin
fn3
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
108240367
NCBI-ProteinID:
XP_017279259
LinkDB
All DBs
Position
LG16:complement(5387727..5509960)
Genome browser
AA seq
2926 aa
AA seq
DB search
MTLVLLNILLPLLLLHFSPVCPSAQRKHPVRYFGHIAENSPAGTPVAGVMVPLLTAGCPD
ADLNASLAGSYASDFRVVYGHRDYQGHLGLVSAKPLDREFIAMYELTVELPPRCQRRPAV
IQVEVSDRNDNIPRFTCGNKTVEVDELTPLGTELAHFDAKDEDAEKNGRLTFYASPEESN
LLHVVPRTGQVWLVGSLLGVSQVTLRLYAKDGGDVTLIGEPVFLRVNVRRSSRARRRSRA
LSEDLTYSVTVPDHIRVGDLVFTVPDQRFEQRWFEVISEANSPVQIERDSGRLYLARSLR
EPAEVVVKIQNLRGDEWYLCRLTLSMPSQADLQWAMFPSPYLATISPDASPGSVVYRLSA
RQRDGTLGQAQFLQLDGGEERFEVDRRSGVIRTTGQPLTPSKEYLLRVQAVDGRGRKGPP
AIVSILAGYRPPQFTNSTYSLNVPENTSVGQPVAVVQAISFQKKSLSYMLLVNPGNLFSI
NQESGALSLTRTVDYESGHNLHNLQVRASETDTGLSGVAEVVVHVTDENDCTPEFLHSIY
SRDNIPESVAPGTSLLQVLARDCDSGVNSELSYFIPSGDFDITSGGVVSPARRLDYERPN
HIYEFVVVAVDAGTPPRTGTASIRIRVANSNDEAPIFSQNVYKTFLSEDAGPDTLVAIVH
ANDPDGDGVSYAITGGNEDSNFQLDNQKGIIKLRRSPPPRLRGPQYVLNITATDDNASGG
PYPLSSSAQVIVGINDINNNKPLFEECQNYNAAVLENQPPGTFVLSVQAYDADMGVNGEV
KYGIMHRDGVSSGFEIHPDTGVITTTGSFDRERQREFTLSVTATDQAEEPLIGICQITVL
ISDENDNDPKFENSRYQYFLREDTPVGTSFLRAAAHDDDQGSNAAITYSLSNQKPAYLHI
NPSTGWIYVNHPISQTSRINQQIVASDGGNRSSSVELTVIITNVHNQPPQWEQPEYWVTV
PENTIRDAKIVTVKATSPLGDPRVTYNLEEGQVPETNMPVRFYIKPNRADGSASIVVAEN
LDYETTCFFTLRVRVQNVAAVPLASFTTVYVNVTDVNDNVPFFLSSTYEATVPEGAQIGT
SVAQVSATDLDSGLHGMIHYVILKDESGDSQYFSINSHSGVIVTRASFDREQKASYLIEV
QSQDGSESARSGQQGQPNTDTAYVRIFVTDVNDNAPAFAQPVYEVSVEEDKEVGFVLITV
TANDEDEGANAKLRYQITSGNTMGTFDVEPEVGTIFVAQPLDYEMEQHYELRLVASDGKW
ENETLVVVQVVNRNDEAPVFSQTEYHASVMEELTQLPVFILEVSATDPDQEADQTALRYS
LHGQGAGGEFTIDEHSGRIYAQRRLDREERPAWRFLVLATDEGGLGLTGFADVLLEVRDI
NDNAPFFPCPALEVEGCFVGQVAENSPADTSIMEMRAMDLDDPNEGRNAMLTYSIIKNIR
NEINLNLFSINATTGTIYTVLRSLDRETEDKYLVVVEARDGGGLSGTGTATIMVSDVNDH
PPIFTQRAYSTQVTEDLEVNSEVLVVSATDGDEGENAVVAFSIVGGDEDRKFFVETDKVN
RRGMIKLKKRVDFEKLHERVFNLTLKAEDADFFSLAYCLVQVEDSNDHAPVFFPQFYESS
AMLEDVPVGTIVTQVTASDLDSGQNGRFSYSISKESDPYNQFLVDQSGWVVVAHPLDREK
ISQHRIMVLATDAGIPSLTGTAIVMVSVLDVNDNGPEFEFPYKPVVWENTAAPQVVRMNE
TSLLLHATDRDTSTNGGPFSIRLLMLTSDATNFNLTDFRNGSAAITTLRTFDRERQKEYR
LPILMIDGGSPPMSSTNTLTVVIGDRNDHPHLPGHTHFIVYSYEGILPMTVLGQIQSPDL
DDWSEKVYRFEGKSTRFFSLNQSSGQLSVREGTPPGSYHLQVQVSDHTWPDVTSTSQVDV
TELQQDALQQAASIRLTNLTVAEFFRRSRVGEESRFTRLVQSLAEVLQTLPENVQIFSVG
NAGRHVSKALNVWFAAHGSPYYKAEKLHGYVAANKDKLEAMLGVSISQVGVDDCPYTDCS
QLGGCSNEISFSQVPVALSSGNISLVSLSASSTAQCGCKGRDAVRLPCSAYPFNPCLNGG
TCQDGPLGYRCNCPPMLDGPECQQTKHSFGGQGYAWFPPIKPCFQSHISIEFLAESANGL
LLYNGPLGLVHSGEQEDFIAVELRNGGPVLSINHGSGTLTLQLTPKTTINDRRWHRLDII
SDGKVVQLVLDQCGGVALNELEGVGGEVREIDESGCRAAGETPGNQRYLNVFQPLQLGGV
KELTPYRRYRSFTGCIRNLVVDSQVYDLASPGESVDSAPGCRLTDGVCVTAAGPSCGVHA
SCLADWGSFSCECRPGYTGHKCDRAVAESSFDANSMMRFQLRGGGSSRRTNIQLLLRTRA
TSGTLLSVASRDANEYIVLEITEGHLSVQANLGDGPHSLKLLGHRVDVGQWVQVSLSRHD
NTFTLRLEQGGGSREVQARLGSHREIVIYPASLMVGSRPNAGDKADFLGCMRDVRFNGHV
LPLDGQSRDLVMVLERRGVTSGCSSDACSSQPCRSPLRCIDLWRKHQCRCPGAQVTVTDD
SGQQRCVPSPCGPSSCRNGGTCQALSPDSYQCRCQEGFRGQRCELGQVKGHRLAALSPSS
ILAISMCLLVFIVVLVAVTVWNQKGSRNKFRKRGVYHIPAEHESWEDIRENILNYNEEGG
GEQDQNGYDITELKRPLCSSLSQSSSCTTAPLIKSSPGSQEEVHPSSSSCSSGAPYLSIP
HHHHHQQQHAVNAAYNGDVTYANFTSHASRDTETSDAGSYVDAPSRSRSHVDFKSYVTRI
IWEADNDSDAFPPDAYHVWCVEGSGSSAGSLSSLGSAVSCRKMSTSNEEEEENDEGRFVY
DRLSRWGPKFQALSEMYDRPQLALTYRDAIAYIQRSHSHDPLPQHH
NT seq
8781 nt
NT seq
+upstream
nt +downstream
nt
atgactttagttctcttgaacatcctgctcccgctgcttctgcttcatttctcaccggtg
tgtccgtctgcgcagcgcaaacatccagtgcgttacttcgggcacatagcagaaaactcc
ccggctgggacgcctgtggccggggtcatggttccgctgctaaccgcagggtgtcctgat
gcagatcttaatgcgagcctggccgggagttacgcgtcggatttcagagtcgtttacggg
cacagggactatcaggggcatctgggtttggtctccgcgaaacctttggaccgagagttt
atcgcgatgtacgagctgacggtggagctgccgccacggtgtcagaggagaccggctgtc
atccaggtggaggtgtcagacaggaacgacaacataccccgcttcacctgcgggaacaag
acggttgaagtagacgagctgactcctttaggaaccgagctggctcactttgacgcaaaa
gacgaagacgcggagaaaaacggacgcctaactttttacgcatcgccagaggagtccaat
ctgctccacgtggttccacggaccgggcaggtttggcttgtcggatcccttctgggggtc
agccaggtgactctgcgcctttacgcgaaggacggaggagatgtcacgctgataggagag
cccgtgttcctgcgcgtcaacgttcggaggtctagcagagcgcggcggaggtcccgagct
ctgtctgaggatctgacctactcagtgactgttccagaccacatcagagtcggggatctg
gtgttcacggtgccggaccagaggttcgagcagcggtggttcgaggtgatatctgaggcc
aactcgcctgtacagatcgaaagggactcggggcgtttgtacctcgcgcgcagtctgagg
gagcccgcggaggtggtggtgaagatccagaacctccgaggtgatgagtggtacctgtgc
aggctcactctgagcatgcccagtcaggctgacctgcagtgggccatgtttccttcccct
tacctggccaccatcagtcctgatgcctctcctggctccgtagtataccgactgtcggca
cggcaacgagacgggacactggggcaggcccagttcctccagctggatggtggtgaggag
cgctttgaagtggaccgtcgttctggtgtgataaggaccacaggacaacctcttacccca
agcaaagagtacctgctgcgggttcaggcagtagatggacggggccgcaaaggcccaccc
gccattgtttccatcctcgctggataccgaccaccacaattcactaactccacctacagc
ctgaatgttccagaaaacacatctgttggccaaccagttgctgtggtccaagccatctcc
ttccagaagaagagtctgtcctacatgctgctggttaatcctggaaatctgttcagcatc
aaccaagagagcggcgcactcagcctcactagaactgtggactacgagagcggtcacaac
ctccacaatctgcaggtccgagcctctgaaaccgacactggcctgagcggcgtggcagag
gttgttgttcacgtaacagatgagaatgactgcacacccgagttccttcactccatctac
agcagagataacatacctgagagcgtcgcacctggaacgtctctgctccaagttctggct
cgtgactgtgactcaggcgtgaactctgagctgtcttactttatcccaagcggtgatttt
gacatcacatctggaggtgtggtcagccccgcccgtcgccttgactacgagcggcccaat
cacatctatgagtttgttgtcgtcgccgtggatgcaggaacgcctcctcgcaccggaaca
gcctccatccgcatccgcgttgctaatagcaacgatgaagcgccaatcttttctcagaat
gtttataagaccttcctcagtgaagacgccggtcctgacactttggttgccattgttcat
gcaaatgaccctgatggggatggtgtctcttatgccatcaccggcggcaatgaggacagc
aacttccagctggacaaccagaagggcattataaagctgcggcggagtcctcctccgagg
ctcagggggccgcagtacgtcctcaacatcactgccacagatgataatgcatctgggggt
ccatatccactcagcagttctgcacaggtcatcgttgggattaatgacatcaacaacaac
aagccgctgtttgaggagtgtcagaactacaacgcagctgttctggagaaccagccacca
gggacgttcgtcctgagcgtccaggcatacgacgccgatatgggggttaacggagaggtc
aaatatggcatcatgcacagggatggagtgtcgtctgggtttgaaatacaccctgacacc
ggggtgataacaacgacggggagttttgaccgggagcgtcagagggagttcactctttct
gtgacagccactgatcaggccgaggagccgctgatcggaatctgtcagatcacagtgctg
atctcagatgagaacgacaacgaccccaagtttgaaaacagccgctatcagtacttcctg
agagaggacactccagttgggactagtttcctgcgggcagcagcccatgatgacgaccag
gggagcaacgcagccattacctactcactgtccaatcagaagccagcttacctgcacatc
aaccccagcaccggctggatttatgtcaaccaccccatctcacagacgtccaggatcaac
caacagattgtggcgtcagatggaggaaaccgcagcagctctgtggagctgactgtcatc
atcaccaacgtccacaaccagccgccccagtgggagcagccagagtattgggtcactgta
ccggaaaacaccatccgagatgccaagatagtgactgttaaagcgacgtctccactgggt
gatccacgagtgacctacaatctggaggagggtcaggtgccagagaccaacatgccggtg
cggttctacataaaaccaaatcgagcagacggctcagcgtccatcgtggtggccgagaac
cttgactatgagacgacgtgcttcttcacgctgagagtgcgcgtgcagaacgttgctgcc
gtgccactggcctccttcaccaccgtctatgtcaacgtgacagatgtcaacgacaatgtt
ccattcttcctgtcatcaacctacgaggccacagttcctgaaggagcacagatcggcacg
tcggtagctcaggtgtcagcgacagatctcgactctggtctgcatggaatgatccactat
gtgattctgaaggatgagagcggagattctcagtacttcagcatcaactcacacagcggc
gtcatcgtcacccgggcctcttttgaccgcgagcagaaagcttcctacctgatcgaggtg
cagtcgcaggatggctcagagtcagccagatcaggccagcaaggccagcctaacacagac
acagcctacgtcaggatctttgtgaccgatgtgaatgacaacgccccagcttttgcccag
ccggtgtatgaagtgagcgtggaggaagacaaggaggtcggcttcgttctcatcaccgtc
acagccaatgacgaagatgaaggtgccaatgctaagctgcgctaccagatcacctcagga
aacaccatggggaccttcgacgtggagcctgaggtgggcaccatctttgtggctcagccg
cttgactatgagatggagcagcactacgagctccggctggtcgcttctgatgggaagtgg
gagaacgagacgctggtggtggttcaagtggtgaaccgcaatgacgaggcgccagtcttc
agccagacggagtaccacgcctctgtgatggaggaactcacccagcttcctgtgttcatt
ctggaggtgtcagcaacggatccagatcaggaggcagaccagactgctctccgttactcc
ctccatggccagggtgctggtggcgagttcaccattgacgaacactctggaagaatctat
gctcagcgtcgcctggaccgcgaggagcgccctgcctggagatttcttgtccttgccaca
gatgagggaggactaggactcacaggatttgctgacgtgctattagaagtcagagacatc
aacgataatgccccctttttcccatgccctgctctggaagtggaaggatgttttgttggc
caagtggctgaaaactcacctgcggatacttccatcatggagatgcgtgctatggaccta
gatgatcccaatgaaggcagaaacgccatgctgacctacagcatcatcaagaacattcgc
aatgagatcaacctcaacctgttctccataaacgccactacagggaccatctacacagtt
ctgcgttcactggaccgggagaccgaggacaagtatctggtggtggtggaagcccgtgat
ggaggaggtttgtcaggaacaggcacagccaccatcatggtttctgatgtaaatgatcat
ccacccatttttactcagagggcctactctactcaggtaactgaggaccttgaagtaaac
agtgaagttcttgtggtctctgccactgatggagatgagggtgagaatgctgttgttgcc
ttcagtattgttggtggagacgaggacaggaagttttttgtggagacagacaaagtgaat
cgacgtggcatgataaaacttaagaagagggtggactttgagaaactccatgagagggtt
tttaatctgaccctgaaagctgaagatgctgattttttcagcttggcctactgcctcgtt
caggtcgaagactccaatgatcatgcgcctgtcttcttccctcagttctatgagtcatct
gccatgttggaagatgtcccagttgggacaattgtcactcaagttacagcatctgatctg
gactcaggccaaaatggacgcttttcttacagcatttccaaggagtcagacccctataat
cagttcctggtggaccagtcaggttgggtggtggtggctcatcctctggacagagagaaa
atctcccagcacaggatcatggtcctcgcaacagatgctggtattccatccctgactggt
actgccattgttatggtgtccgtacttgatgttaatgacaacgggccagagtttgagttt
ccctataagcctgtcgtttgggagaacactgcagcaccccaggtggtacgaatgaacgaa
acctcccttcttcttcatgccactgatcgtgacacctccacaaatggtggcccattctcc
attcggcttctcatgctcacttcagatgctaccaacttcaatctgactgacttccggaat
ggaagtgcagccatcaccaccctccgtacctttgatcgagaacggcaaaaggagtaccgc
ctcccgattcttatgattgacgggggctctcctccgatgagttcaaccaacacccttaca
gttgtcattggtgataggaatgaccatccacacttacctggacacacacactttattgtc
tacagttatgaaggtattctcccgatgacagtcctcggacaaattcaatcccctgacctt
gatgactggagtgagaaagtgtaccggttcgaaggcaaatcaaccaggtttttcagttta
aaccagagctcaggtcagctcagtgtcagggaaggaactcctccaggctcgtatcacctg
caggtgcaggtatcagatcacacctggcccgatgtcacttctacctctcaggtggacgtc
acagagctgcagcaggacgccttgcagcaagctgcttccattcgcctgacaaacctgaca
gtagcagagtttttcaggaggagtcgtgttggtgaggagagccggttcacccgtctggtc
cagtcactggctgaagtcctgcagactttgccagagaacgttcagatcttctctgtgggc
aacgctggccggcatgtcagtaaagcactaaacgtttggtttgccgcacatggctcaccg
tactacaaggcagagaaactgcacggctacgtggcggcaaacaaagacaagttggaggcc
atgttgggtgtgtccatctcccaggtgggggtggacgactgtccgtacacagactgcagt
cagcttggcggctgcagcaacgagatctcattcagccaagtccccgtggctctcagctct
ggtaacatctctctggtgtcgctgtctgcctcgtcgactgcgcagtgcggctgcaagggg
cgggacgctgtccgcctgccctgctccgcttatcccttcaacccctgccttaacgggggc
acctgccaggacggaccgctgggataccgatgtaattgtcctcccatgttggacggcccc
gagtgccagcagaccaaacacagctttggtggtcagggttacgcctggttcccccccatc
aagccctgctttcagagccacatctccatcgagttcctggccgagtcggccaacgggctg
ctcctctacaatgggccgcttggcctcgtccactcaggggagcaggaagacttcatcgcc
gtagagttaagaaacgggggtccagttctgagtataaaccatggatcaggaacgctgacc
cttcagctcacacctaaaaccaccatcaacgaccggcgctggcatcgactcgacataatc
agtgatggaaaggttgtccagctggtcctggaccagtgtggaggggtggcgttgaacgag
ctggaaggcgttggaggggaggtccgagagatcgatgagtctggctgcagagctgcagga
gagacacccgggaaccagaggtatttaaatgtattccagcctcttcagctgggaggagta
aaggaactgactccttacaggcgttacagaagtttcactggatgcatccgtaaccttgta
gttgacagccaggtgtatgatctggcgtctccaggtgagagtgttgacagtgcgccaggc
tgcaggctaacggacggcgtgtgtgtgacggcggctggtccttcgtgtggcgttcacgcc
tcctgcctcgccgactggggctccttcagctgtgagtgccgtccagggtacaccggacac
aagtgtgacagagccgtcgcagagtcctccttcgacgcgaacagcatgatgcgttttcag
ctcagaggaggcggcagctcccgacgcaccaacatccagctgctcctccgaacgagggcc
acatcaggaaccctgctctcagtggcgtctcgggatgccaacgagtacatcgtcctggag
atcactgagggtcacttgtcagtacaagccaacctgggtgacggtcctcactctctcaag
cttcttggtcaccgagtggatgtcggacagtgggtccaggtcagcctcagtcgccatgac
aacacgttcaccctgcgactggagcagggaggggggtcccgggaggttcaggctcggctg
gggagccacagggaaattgtaatttatccggcaagtctgatggttggcagcagaccaaat
gctggagacaaggctgactttctgggctgtatgcgggatgttcgttttaatggtcatgtc
cttcctctggacggccagagtcgggacttggtgatggttctggagagacgaggtgtcacc
tctggctgctccagcgacgcctgcagcagccagccgtgccgcagcccgcttcgctgcatc
gacctgtggaggaaacaccagtgcaggtgtcctggtgctcaggtgacagtgacggatgac
tccggtcagcagcggtgtgttccatcgccctgtggaccttcctcttgccggaatggtggc
acgtgccaggcactgtctcctgacagctaccagtgtcgatgtcaggagggtttcaggggt
cagcggtgcgagcttggacaggtcaaaggtcaccggctagccgctctcagtcccagctcc
atcctcgccatcagcatgtgtctgcttgtcttcattgttgtgttggtggcagtgaccgtt
tggaaccagaaaggcagccgaaacaagttcaggaaacgaggagtttatcacattcctgct
gagcacgagagctgggaggacattcgagaaaacatcctcaactacaacgaggaaggagga
ggagagcaggaccagaatggttatgatatcacagagctgaagcgtccactttgctccagt
ctgtcccagtcgtcctcctgcaccacagccccgctcatcaaatcctcaccgggctcccag
gaggaagtccatccatccagttcctcctgcagctcaggcgctccctacctcagcatccca
catcaccaccaccaccagcagcagcacgcagtcaacgccgcctacaatggcgacgtcacc
tacgctaacttcacatctcatgcgagcagagacacagagacgagcgacgccggcagttac
gtggatgccccatccaggtcgcgctcccatgtagactttaagagctacgtgacgcgaatc
atttgggaggcagacaatgacagtgacgcttttccacccgacgcctaccacgtctggtgc
gtcgaaggttctgggtcctcagcaggaagcctcagctctctggggtcagcagtgtcctgc
agaaaaatgagtaccagcaacgaggaggaggaggaaaacgatgaaggacgttttgtttat
gacagactgtctcggtggggccccaagtttcaggctctgagtgagatgtatgaccggccc
cagctggccctcacgtacagagacgctatagcctacatacagaggagccacagccatgac
ccgctgcctcagcaccactag
DBGET
integrated database retrieval system
