Kryptolebias marmoratus (mangrove rivulus): 108240378
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Entry
108240378 CDS
T05608
Name
(RefSeq) sorting nexin-4 isoform X1
KO
K17919
sorting nexin-4
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108240378
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
kmr04131
]
108240378
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
kmr04990
]
108240378
Membrane trafficking [BR:
kmr04131
]
SNARE
SNARE associated proteins
Others
108240378
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
108240378
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Other Cvt associated proteins
108240378
Domain-containing proteins not elsewhere classified [BR:
kmr04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
108240378
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
Vps5
BEX
V-SNARE
Motif
Other DBs
NCBI-GeneID:
108240378
NCBI-ProteinID:
XP_017279284
UniProt:
A0A3Q3BDE4
LinkDB
All DBs
Position
LG6:9316265..9345109
Genome browser
AA seq
449 aa
AA seq
DB search
MRPASSADSSQMMMADSGSSEEVAVICNTDITSTESENNIINTMVERGTALLRKMEISVA
EADKRTGKNTVNMQETYTVYLLETRPADSVPEGGTPAAPDTLWRRYSEFELLRTYLLVTY
PYIIIPPLPEKRAEFVWHKLSADNLDPDFVERRRVGLENFLLRVASHPVLSNDKIFFLFL
TEEKGWREAVLETGFQDKADSRLKSLSAMLRVKNPDKRFTALKHYSDELNTVISQLLRVR
ARVADRLYGVYKVHGNYGRVFSEWSAIEKEMGDGLQSAGHHMDTYAASIDDILEEEEHYA
DQLKEYLFYTDSVRSVCRKHELIQYELEMAAQDLVYKKQQKEELATGAVRIFSLKGMTSK
LFGQESQEQRESKVAALEQSIQEGEEAIKEKNTESQEFVQKAWNDIERFTAQKDKDLREA
LISYAIMQISMCKKGIQVWSNAKECFNKM
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcgccctgcgagctcagctgacagcagtcagatgatgatggcagactctggaagtagc
gaagaagtagccgtgatttgcaacacggacatcacttcaacggaatcggagaacaacatt
ataaacacgatggtggaaagagggactgctctgttgagaaaaatggaaataagcgtagca
gaggcggataaaaggactgggaaaaacactgttaatatgcaggaaacctacactgtctac
ctcctcgaaacacggccagcagattctgtcccagaaggaggtacgccggctgcacctgac
actttgtggaggcgctacagtgagtttgagctgctcagaacatacctcctggttacctat
ccctacatcatcatccctccgctgccagagaaaagggctgagtttgtttggcacaagctt
tctgcagacaacctcgacccagattttgttgagcgacggagagttggtctggaaaacttc
ctgctgcgtgttgcatcacatcctgtcctgtccaatgacaaaattttcttcctctttctt
accgaggaaaagggatggagggaggcagttctggagacaggctttcaagataaggctgac
tccagattgaagtctttgagtgccatgttaagggtcaagaaccctgacaagagattcaca
gcattgaaacactacagtgacgagctgaacacggtcatctctcagttactcagagtgaga
gcgcgagtagcagacagactgtatggcgtttacaaggtccatgggaactacggcagagtg
ttcagtgaatggagcgcgatagaaaaagaaatgggagacgggctgcagagcgctggtcac
cacatggacacgtatgctgcatcaatagacgacattcttgaagaagaggagcactatgca
gaccagctgaaagaatacctcttctacaccgattctgtcaggtctgtgtgtaggaaacat
gagttgatccagtatgagctggagatggcagcgcaggaccttgtctacaagaaacaacag
aaagaagagctagcaactggggcggtgcggatcttttctctgaagggaatgaccagtaag
ctgtttggtcaagagagccaggagcagagggagagcaaggtagcagcgctggagcagagc
atccaagaaggagaggaagccatcaaggagaagaacaccgagtcccaagagtttgtgcaa
aaagcgtggaacgacattgaacgttttacggcgcagaaggacaaagatttacgggaagca
ctaatcagctatgctattatgcagatcagcatgtgcaaaaagggaatccaggtgtggtcc
aatgccaaagagtgcttcaacaaaatgtga
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