Kryptolebias marmoratus (mangrove rivulus): 108240396
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Entry
108240396 CDS
T05608
Symbol
bard1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108240396 (bard1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmr03019
]
108240396 (bard1)
04121 Ubiquitin system [BR:
kmr04121
]
108240396 (bard1)
03036 Chromosome and associated proteins [BR:
kmr03036
]
108240396 (bard1)
03400 DNA repair and recombination proteins [BR:
kmr03400
]
108240396 (bard1)
Messenger RNA biogenesis [BR:
kmr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
108240396 (bard1)
Ubiquitin system [BR:
kmr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
108240396 (bard1)
Chromosome and associated proteins [BR:
kmr03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
108240396 (bard1)
DNA repair and recombination proteins [BR:
kmr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
108240396 (bard1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
zf-RING_6
Ank_3
Ank_5
Ank_4
BRCT_2
BRCT
zf-RING_5
zf-RING_10
zf-C3HC4_3
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
108240396
NCBI-ProteinID:
XP_017279321
UniProt:
A0A3Q3BDI9
LinkDB
All DBs
Position
LG6:complement(9105141..9126210)
Genome browser
AA seq
802 aa
AA seq
DB search
MDENKTEEWKNTKEAVANFRRLLLCSKCSDLMKEPVCLGTCEHMLCRSCAGPRAGDGCVV
CHSPAWVKDIQINRQLSSIVQIFCGLESLLNPAQQPDSSAAEDQTQPETALLKHKKNFKI
WFSPRSRKVRCRAEKPSEVDAPDGKSAVEVAAPPLSSSTALSGDLSVFNFSPSSQDSSSS
QKCSGVNKKGKKRSKKPATSRRVQKATRTTHKQTKQNIKKQKLEAINQQWGITEEEPAPS
KLEQPCADRARRSSKRVSFLSPPVTSDEPQLEAPHGNTNELSPDNSTITDSLSGGVINAS
NDHIQPGQSMSNDKLSESDSYPNGSPDKQENVCPPEIPSKRGRAEEKSYTLESTPKRPKA
SPGQRRKSLGRISPAVINRLSSASPTSDKSSKNSREERGSPSVVEPVSTEIHSKSLCSPR
SSVRRLSSGSPAVVKRNHKGETLLHLAAIKGDTEAVKELLDQGADPNLKDNAGWTPLHEA
CNLGHLPVVEVLVSGGALLNTPGYENDSPLHDAVRNGHAAIVKRLLQLGASQNVLNLHGK
RPADYTVSQEMLEIFQEAAEGTQYANSHTTHSPSANLSAASECVKTDQIVVFLPSKLSPQ
EQRQLARLGHLLGGKKADTFSGSVSHVVVPEGQMPTTSSALLGLLAGCWVVKYSWVQACL
QAGKWLPEAEHEAGEGPQRSRINKCSLLPPLFDGCFFFLLGSFKAPTKDELSRLLREGGG
QLLSRQPKPDSDVTQTLSAAAYHAQPGSDQALCTQYVIYDPRGPFSPAVVRRGKVWSAPS
SWVIDCIAAFCLLPVPDPAEKS
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaaataagacggaggagtggaaaaacactaaagaggctgtggcaaacttccgc
agactgctgctctgctccaaatgctctgatttgatgaaggagcccgtctgtctgggcacg
tgcgagcatatgctgtgcaggtcgtgtgctggcccccgggcaggggacggctgcgtggtg
tgtcacagtcctgcgtgggtgaaggacatccaaatcaacaggcagctcagcagcattgtg
cagatcttctgtggtttggagtccctgctaaatcccgcacaacaacctgactcgtctgca
gctgaggaccaaacacaacctgagactgcgctcttaaaacacaagaagaacttcaagatc
tggttcagtccgcgcagtcgtaaggtgcgctgcagggcggaaaaaccttctgaggtcgat
gcaccagacggcaaatctgccgttgaagtggctgcaccaccgctcagctccagtactgct
ctgagcggagacctgtccgtttttaatttttctccatcctcccaggactcttcttcttct
cagaaatgcagcggtgtaaacaaaaaaggaaagaagaggtctaagaaacctgctactagc
aggcgcgttcaaaaagcgactaggaccacacataaacagacgaagcagaatataaagaag
caaaagctggaggccataaaccaacaatggggaataacagaggaagagcctgctccatcc
aaactggagcagccctgtgctgatagagcaagaaggtccagtaaaagggtttctttccta
agccctcctgtcacttctgatgagcctcagcttgaagcaccacacggtaacacaaatgaa
ctcagtcccgacaacagcacaataacagacagtctctcaggaggcgtgatcaatgcatca
aatgaccacattcagcctggtcagagcatgtcgaacgacaaactatctgaaagtgactcc
tatccaaatggcagccccgacaaacaggaaaacgtatgtcctccagagattccctcaaaa
agaggcagagcagaggagaaaagctacaccctggagagtacgccgaaaagaccgaaggct
tctccaggccaaaggagaaaatcactgggtcggatatctccggctgtcatcaaccgttta
tcttcagcaagccccacaagtgataagagcagcaaaaactctcgagaggaaaggggtagt
ccctctgttgtagaacctgtgtctacggaaatccacagcaaatctctgtgtagtcccaga
tcatctgtcaggcgactgagctctggaagtcctgcagttgtgaagagaaaccacaaggga
gagactctgctgcatctcgctgcaataaagggagatacagaggctgtcaaggaactgctg
gaccaaggagctgaccccaacttgaaggataatgctgggtggacacctctgcatgaagca
tgtaacctgggccacctgccagttgtggaggtgttggtctctggaggagccttgttgaac
acacctggctacgaaaacgactctcccctccacgatgccgtgaggaacgggcacgccgct
attgtgaaacggctgctgcagcttggggcttcgcagaatgtcctcaatctgcatggaaag
cggcctgcagattatacggtgagccaggagatgctggagattttccaggaagctgctgaa
ggaacccaatatgctaattctcatacaactcatagcccctcagccaatctctctgcggcg
agcgagtgtgtgaaaacggatcagattgtggtgtttttgcccagcaagctgtcgccacag
gagcagcgtcagttggccagactgggacatcttctgggagggaaaaaggcagacaccttt
tctggctcagtgagccatgttgttgtgccagaaggacaaatgcccaccacctcctccgcc
ctcctgggtcttcttgctggctgctgggttgtcaaatacagctgggtgcaagcatgtctg
caggcagggaagtggctgccagaagctgagcatgaagccggagaaggccctcagcgcagt
cgcatcaacaaatgcagtttgctgccaccactcttcgacggctgtttcttcttcctcctc
ggctccttcaaggctccaactaaagatgagcttagcaggctgctgcgggaaggcggcggt
cagctcctgagccgacaaccgaagcccgacagcgacgtgacgcagactctgagcgcggca
gcctaccacgcccagccgggctctgaccaggccctctgcacccagtacgtcatctatgac
ccccggggacctttcagccctgcggtggtcagacggggaaaggtgtggtcggctccctcc
tcctgggtcatcgactgcatcgcagctttctgcctcctccctgtgccagaccctgcagaa
aagtcctaa
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