Kryptolebias marmoratus (mangrove rivulus): 108240480
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Entry
108240480 CDS
T05608
Symbol
trip12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108240480 (trip12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
kmr04121
]
108240480 (trip12)
Enzymes [BR:
kmr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
108240480 (trip12)
Ubiquitin system [BR:
kmr04121
]
Ubiquitin ligases (E3)
HECT type E3
108240480 (trip12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
Motif
Other DBs
NCBI-GeneID:
108240480
NCBI-ProteinID:
XP_017279456
LinkDB
All DBs
Position
LG2:17379460..17410503
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AA seq
2060 aa
AA seq
DB search
MSNRPNSNPGGSLRRSQRNTAAAQPQDHTAAGRLQSEQVKRKANSPPESRRPNSKAPKAT
ASSATGQSRGHSSRRSGLTLSVASFVLQDDQEAAGTSEQERPGHQSKSEGTRGLKRGETP
DEISVLGPTPAKKSKSSLPAPRNNSSEAKKGPAKTKKRPVAPESSASSGRSQSKKSVAAG
ASPLQKRKKSDTLPGLSSTAGSLPNCTEGRTAKATKLASKSAASAKAGCSNVTDSSSSAS
SSSSSSTTTGSNSAATQGARVKQGKDQTKARRSRSASSPSPRRSTRDKEQAKTASSSKFE
WATRFNPKVNLPKPKLSLPGSSKTETSKPGPSGLQAKLASLRKSTKKRSESPPAELPSFR
RSTRQKTTGSCASTSRRGSGLGKRGAADARRQEKMADSDNNQDGANSSTARTDEASQGAS
ASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGSGA
SSKAQQLLQGLQATGDESQQLQAAIEMCQLLVMGNEETLGGFPVRSVVPALITLLQMEPN
FEIMNHASRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQFIDVAEQALTALEMLSRRHS
KAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVDDSLSLLTQRLTHQ
DKKSVESTCLCFARLVDNFQHEENLLQQVASRDLLTNIQQLLVVTPPVLSSGMFIMVVRM
LSLMCSNCPSLAVQLMKQNIAETLRFLLCGASNGSCQEQIELVPRSPQELYELTSLICEL
MPCLPREGIFAVDVMLKKGSAQTTEGAIWQWRDDRGLWHPYNRIDSRIIETAHQNGEDEI
SLSTLGRVYTIDFNSMQQINEDTGTARGIQRKPNPLANPNTGSHQEVRREDARAQLMKED
PELAKCFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLRNHAVSSHI
ASMLSSQDLKIVVGSLQMAEILMQKLPDVFSVYFRREGVMHQVKNLAESESFLVTSPPKA
CSSGTTSLCTTTISNASTTSANNATPDLGSPSFQHTMDDSLDLSPQGRLSDVLKRKRLPK
RGPRRPKYSPPRDDDKADNQAKSPTSTQSPKSSFLASLNPKTWGKLGAQTNNANSEPSRT
AGGSGLARVPPKDSISNNRDKIKAWIKEQASKFVERYFNSENVDGSNPALNVLQRLCTAT
EQLNLQVDGGLECLVEISIIVSESDVSSFEIQHSGLVKQLLIYLTFNTDRDLLSRDMRLK
RFLHVFTGCPVPGMESLSRLDPAENAPYLALVHKMNSCLSQMEQFPVKVHDFPSGNGNGS
RGSQALKFFNTHQLKCQLQRHPDCTNVKQWKGGPVKIDPLALVQAIERYLVVRGYGRIRE
EDEDSDDDGSDDEIDESLAAQFLNSGSVRHRLQFYIGDHLLPYNMTVYQAVRQYSLQAEE
ERESTDDEANPLGRAGIWTKTHTIWYKPVREDEDGSKDAVGGKRGRAQTAPTKTSPRNAK
KQDELWHDGVCPGVINPLDTYLTSEPPENITFDDPSLEVTLLLRVLQSISRYWFYLYDNA
VCKEIIPTTEFINSKLTAKANRQLQDPLVIMTGNIPTWLIELGKTCPFFFPFDTRQMLFY
VTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTINRDDLLKQAESVMQDLGSS
RAMLEIQYENEVGTGLGPTQEFYALVSQELQRADLGLWRGEEVTLANPKGNQEGTKYMFN
SRGLFAVPFGRTTKPAHIAKIKMKFRFLGKLMAKAIMDFRLLDLPLGLPFYKWMLRHEMS
VSSHDLTNIDPGVAKSIQHLEDIIRQKKRLEQDRSQTRETLQQALESLNMNGCSVEDLGL
DFTLPGFPNIELKKGGKDVPVTIYNLEEYLRLVVYWTLNEGVSRQFESFREGFESVFPLH
HLQYFYPEELDQLLCGSKSETWDVKTLMECCRPDHGYTHDSRAIRFLFEVLSSFDAEQQR
LFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLKLPDYSSIE
IMREKLLIAAREGQQSFHLS
NT seq
6183 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaattccaatccaggggggtcactgcgccgttcacagaggaacact
gctgcggcccagccacaagaccacactgcagctggaaggttgcagtcagagcaggtaaaa
cgtaaagcaaattccccacctgaaagtagaagacctaattctaaggctcccaaagccaca
gccagctcagccactggccagtccagagggcacagctcaagaagaagtggtcttactctg
tccgtggcttcgtttgtgctgcaagacgaccaagaggctgcaggaacatctgaacaagag
cgaccaggccaccagtcaaagagcgagggcacccgaggacttaaacgaggtgaaaccccc
gacgaaatcagtgtccttggaccgacccctgccaagaagtccaaatcatccctccccgca
cccagaaataactcctcagaggccaagaaaggccccgccaagaccaagaaaagaccagtt
gcaccagaatcgtctgcatcgtcaggtcgaagtcagagcaaaaagagcgtggccgctggg
gcctctccactccagaaacggaagaaatcggacactctccccggtctaagtagcaccgct
gggtccctccccaattgtaccgagggcagaactgcaaaagccaccaagctggcgtctaaa
tcggccgcctcagccaaagctgggtgtagcaacgtgacagactcctcctcctccgcctcc
tcctcttcttcttcctccaccaccacaggctccaacagcgctgccacacagggcgcccgc
gtcaaacagggaaaagatcagaccaaggcacgccgctctcgctccgcttctagcccctcc
ccgcgccgaagtacgcgtgacaaggagcaggccaaaactgccagctcttcgaagtttgag
tgggcaacacgcttcaaccccaaagtcaatttgccaaaaccgaaactttccttacctgga
tcctccaaaaccgagacctccaaacctgggccatccggactacaagctaaactagcaagt
ttgaggaaatccacaaagaagcgcagcgagtctcctccagcagagctccccagttttcgg
cggagcacacgccagaagaccacgggctcttgtgccagcacaagtcggcggggctcaggc
ctgggcaagcgcggggcagccgacgctcgccgacaggagaaaatggctgactccgacaac
aaccaggatggggctaactcatctactgctcgcactgatgaggcatcccaaggagcttca
gcttcaagctcagttgctggagcagtcggcatgaccacctctggagagagtgagtctgat
gattctgaaatgggaaggcttcaagctttactggaggccagaggtctgcctccacatctt
tttgggcccctgggaccccgtatgtcacaactgtttcacaggacaattggcagcggagcg
agctccaaggctcagcagctgctgcagggtcttcaggctacaggtgatgagtctcaacag
ctccaagctgccatagagatgtgtcagctgctggtgatgggcaacgaggaaacacttggt
ggatttcctgtcaggagtgttgtgcccgctctgattacactgttacaaatggagcctaac
tttgaaattatgaaccacgcctcacgagccctcacctacatgatggaggccctccctcga
tcttcagctgtggtggttgatgctattcccgtcttcctggagaagcttcaggtgattcag
tttattgacgtagcagaacaggccctgaccgccttggaaatgttgtcaagacgacacagc
aaagcaattttacaggctggtgggcttgctgactgcctcctctacctggagttcttcagt
attaatgctcagagaaacgccttggccattgcagcgaactgctgccagagcatcactccg
gacgagttccactttgttgacgattctctctcattgttgactcagaggctcacacaccag
gataaaaagtcagttgaaagcacttgcctctgtttcgccagactggtagacaactttcaa
cacgaagagaacctgctgcagcaggtggcatcacgggacctgctgaccaacattcagcag
ctgctggtcgtcaccccccctgttcttagctcggggatgttcatcatggttgtccgcatg
ctgtccctgatgtgctccaactgcccgagtctggctgttcagcttatgaaacagaacata
gcagaaactctgcgtttcctcttgtgtggtgcgtcaaacggcagctgccaggagcagatc
gagttagttcccagaagccctcaggagctctatgaactgacctcgctcatttgcgagctg
atgccctgccttcccagagagggcatctttgcagtcgatgtaatgctgaagaaaggcagc
gcccagacaacagagggggcaatctggcagtggagggatgaccggggcctctggcatcct
tacaatcgcatcgacagccgcattattgagacggcccatcagaacggagaagatgagatc
agtttgtcaactctgggccgtgtctacaccattgacttcaactctatgcagcagataaat
gaagatacgggaacagcacgtggaatccagaggaagcccaaccctcttgccaaccctaat
acagggagtcatcaagaggtccgtcgagaagatgcacgagcccagttgatgaaggaggac
cctgagctggccaagtgctttattaaaacactgtttggggtcttgtatgaggtgtacagc
tcatcagctggccctgctgtccgacacaagtgccttagagccatcctcaggatcatttac
tttgccgatgcagagctgctgaaggatgtgctgaggaaccatgctgtgtccagtcacatt
gcctccatgctgtccagccaggacctgaagattgttgtgggttctctgcagatggctgaa
attctcatgcagaaactgcccgatgtcttcagtgtttatttcagaagagaaggtgtaatg
caccaggtgaagaacctcgctgaatctgagagctttctcgtcactagtcccccaaaggcc
tgctccagtggtactaccagtctctgtactacaaccatcagcaacgcatccacaacttct
gctaataatgcaactcctgacctgggctcgcccagcttccagcacactatggacgactcg
ctggacctcagcccacaggggcggttaagtgatgtcctaaagagaaaacggcttccaaaa
agaggacccagaagacctaaatactctccgccaagagatgatgataaagcagacaatcag
gccaagagccctacaagtactcagtcccccaagtcatccttcttggccagcctcaatcct
aagacctgggggaagctgggtgctcaaactaacaacgccaactctgagccatcacgcaca
gcagggggcagtggcctggcacgggtacctcccaaggactcgatttcaaataacagagac
aaaataaaagcctggatcaaagaacaggcgagtaaatttgtggagcgctacttcaactct
gaaaatgtggacggcagcaaccctgcactgaatgtactccagagactttgcacagcgacc
gagcagcttaacttacaggtggatggtggtttggagtgcctagtggagatctccatcatt
gtatcagaatctgacgtgtcgtcctttgagatccagcacagtgggctggtgaagcagctg
ctgatctacctgaccttcaacacggacagagacttgctaagtcgtgacatgcggctcaag
agattcctccacgtgttcacaggctgtccggttccaggaatggagtcattaagtcgcctg
gatcctgcagagaacgcgccttatctggcacttgtgcacaagatgaacagctgtctgagc
caaatggagcagttccctgtcaaggtgcacgacttccccagcggcaacggcaacggcagc
aggggatctcaggccctgaagtttttcaacacacaccagcttaagtgtcagctgcagaga
cacccagattgcactaatgtcaaacagtggaaaggtggccccgtgaagatcgaccccctg
gccctggtgcaggcaatcgagcgatatcttgtggtcagaggatacggccgaatcagggaa
gaagatgaagacagcgacgatgacggttcagatgatgaaatagacgaatcactggcagcg
cagttcctgaactcgggtagtgtgcgtcacagactacagttctacatcggtgaccatctg
ctgccgtacaacatgacagtttaccaggccgtgcgacagtacagtctgcaggcggaggag
gagagagagtcgacagatgatgaagcaaatccacttggaagagctggaatctggaccaaa
acgcacacaatatggtataagcctgtgagggaagacgaagacggcagcaaagacgctgtg
gggggaaagcgaggcagagctcagaccgctcccaccaaaacctcgccacgcaacgccaag
aagcaggatgagctgtggcatgatggtgtttgtcccggcgtcatcaatcctctggataca
tacctcacttcagagccaccagagaacataacttttgacgacccgtctttagaggtcacc
ctgctgctgagagtccttcagtccatcagtagatactggttctacttgtatgataatgct
gtgtgtaaggaaattattccaaccacggagttcattaacagtaaactgactgccaaagca
aaccgacagctacaagacccgctggttatcatgaccgggaacatcccgacctggcttatt
gagcttggaaagacctgccccttcttcttcccctttgacacccggcagatgttattctac
gtgaccgccttcgatcgagacagagccatgcagcgcctactggacacgaaccctgagatc
aaccaatcagattctcaggacagccgagtcgcgccccgtctcgacaggaaaaagagaacg
ataaaccgtgacgacctcctaaaacaggcagagtctgtaatgcaggaccttggcagctcc
agggcaatgctggagatccagtatgagaacgaggtgggtacaggtctcggtcccactcag
gaattctacgctctggtatcccaggagcttcagagggctgatcttggcctttggagaggt
gaagaggtgactctggccaaccctaaaggaaaccaggagggcacgaagtacatgttcaac
tccagaggactgtttgctgttcccttcggcagaacgactaaaccagcacacatagccaaa
atcaaaatgaagttccgtttcttagggaagttaatggccaaagccattatggacttcaga
ctgctggatctgcctttgggactccctttttataagtggatgctacggcatgagatgtct
gtgagctctcacgacttgacgaacattgatcccggtgtggccaagtccatccagcacctg
gaggatattatccgtcagaagaagaggttggagcaggaccgatctcagaccagagaaacc
ctacagcaggccctcgagagcctgaacatgaacggctgctctgtggaggatctcggcttg
gacttcacgctcccaggattccccaacatcgagctgaaaaagggaggcaaagacgtgcca
gtcaccatctacaacctggaggagtacctcaggttggtggtatactggactttaaatgaa
ggagtgtcgagacaatttgagtcgtttagggaagggttcgagtcagtcttccccttgcat
cacctacagtatttctatccagaggagcttgaccagttgctgtgtggcagtaaatctgag
acgtgggacgtcaagacgctgatggagtgctgcagaccggaccacggctacacacacgac
agccgcgccatccggttcctgttcgaggtgctgagcagcttcgacgccgagcagcagaga
ctctttctgcagtttgtcacaggaagccccaggctgcctgtcggaggtttccggagcctg
aatccacctctgaccatcgtgaggaagacattcgagtcgacggagaacccggacgacttc
ctcccatcagtcatgacctgcgtcaactacctgaagctgcctgactactccagcatcgag
atcatgcgagagaaactgttgattgctgctcgcgagggccagcagtcgttccacctttcc
tga
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integrated database retrieval system
