Kryptolebias marmoratus (mangrove rivulus): 108240574
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Entry
108240574 CDS
T05608
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
kmr04121
]
108240574 (rlim)
Enzymes [BR:
kmr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108240574 (rlim)
Ubiquitin system [BR:
kmr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108240574 (rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING_16
zf-RING_4
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
108240574
NCBI-ProteinID:
XP_017279635
UniProt:
A0A3Q3F5W4
LinkDB
All DBs
Position
LG9:complement(14557053..14564877)
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AA seq
642 aa
AA seq
DB search
MEGSDGVEQGGSEQPESQRRRQLDRLDREEAFYQFVNNLSDEDYRLMRDNNLLGNPGEVT
EDELFSRLQQIKDGPEQQNTNPSTESQEEQVEQPESSEDPPGGDSLLDWLNTVRRTGNTT
RTGHRGNQSWRAVSQTNPNSGDFRFSLEISVNRNLAEQQAAAEGEQEPPEQSPEVQEVAA
NPEPPVPMEAEVVEEPVVEELAVIVEPEPELEEAVLPEVEREPPSPAPVQPEQAPPCSSP
RRGQRRARSRSPEPRRTRARLARSRSPLNLDQLDGLPNPRHPYTSQSPTSSTDTPSVPQV
EGSSRTRQHILSRQNLTEGDVQPPRVDAEPVPEGQPVISQEGESTGIEGGAAGRRPPTIM
LDLQVRRVRPGEYRQRDSIASRTRSRSQNSNNTFLYESERGGFRRTFSRSERAGVRTYVS
TIRIPIRRISDAGLGEATSMALQSMIRQIMTGFGELGYLMDSDSDSSDSNRGTSTSADLE
TLNNPEANNVDTSAADVDEQPVAAGVRGRTVETEMDEGLATGPQGSGGRARPRPPINLEE
PSSLPFLRLAHFFLLNDDDDDQPQGLTKEQIDNLSMRNFGESDALKTCSVCITEYAEGNK
LRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLVSANRESVI
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggaagggtctgacggtgtcgagcagggcggcagtgagcagccggagtcgcagcgcagg
aggcagctggatcgcctggacagagaggaagccttctaccagttcgtcaacaatctcagc
gatgaggactatcgtctcatgagagataacaaccttttgggaaacccaggagaggtgacc
gaagatgagttgtttagtagacttcaacaaatcaaagatggtccagagcagcagaatact
aacccaagcactgaaagtcaggaagagcaagtcgagcaaccagagagctccgaggatcct
cctggtggtgatagcctcctggactggctgaacacagtgcgccgcacgggcaacacaacc
agaaccggtcatcgtggaaaccagtcatggcgggctgtcagccagaccaacccgaacagc
ggggattttcgcttcagtttggagataagcgtgaaccgcaatctggctgaacagcaagca
gccgctgaaggggagcaggagcctccagagcagtctccagaagttcaagaagtggctgca
aatcctgaaccgccagttcctatggaggcagaggtagtggaagaaccagttgtagaagaa
ttagccgtcattgtcgagccagaacctgaactagaagaggctgttttgccagaggttgag
agggagccgcccagcccagccccagtacagccagaacaagctccaccttgttcttctcca
cgtcgaggacaaagaagagcccgcagccgtagcccagaaccacgcaggactagggccagg
ttagccagaagtcgctctcctctcaatttggatcagctcgatggcctacctaatccacga
catccctacacctctcaaagccctacttcttctacagataccccgtctgtgcctcaagtg
gagggcagttctcggactcgacagcatattctttcaaggcaaaacctaactgaaggtgat
gttcagccgcctagggtggatgcagaaccggtgccagagggccagcctgtcatatctcag
gaaggtgagtctactgggatcgaaggaggtgcagcgggacgccgccccccaactataatg
ctcgatctccaggtgcgtcgcgtgcggccaggtgaatatcgacaaagggacagcatcgcc
agtcggacccgctcacgctcccaaaactcaaacaacacatttctttatgagagcgagcgc
ggtggatttcgaaggaccttctcgcgctctgagcgtgctggtgtaaggacctacgtcagc
actattcgaatccctattcgaagaatttcagatgcaggtttgggagaagcaacctcaatg
gctcttcagtctatgataaggcaaatcatgacaggctttggtgagctcggctacctcatg
gattcagactcagattcctcagattcgaaccgtggaaccagcacgtctgcagacttggaa
accctcaacaatccagaagcaaataacgtggacacctctgctgctgacgtcgatgaacaa
ccagtggcggctggagtcagggggaggacagttgagactgagatggacgagggccttgcc
actgggcctcagggttctggtggcagggctcgacccagaccccctatcaacctggaggag
cccagctcactgcccttcctccgacttgctcatttcttcctcctgaatgacgacgatgac
gaccagccccaggggctgaccaaagaacagatcgataacctctccatgcgcaacttcggc
gagagcgacgccctgaagacctgcagcgtctgtataacggagtacgccgaggggaacaaa
ctacgcaagcttccctgctctcacgagtaccacgtgcactgcattgaccgctggctttct
gaaaactccacgtgtcccatctgccgcagggctgtcctggtatcagccaaccgcgagagc
gtcatataa
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