Kryptolebias marmoratus (mangrove rivulus): 108240584
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Entry
108240584 CDS
T05608
Symbol
gabrb2a
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-2a isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04080
Neuroactive ligand-receptor interaction
kmr04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108240584 (gabrb2a)
04082 Neuroactive ligand signaling
108240584 (gabrb2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
kmr04040
]
108240584 (gabrb2a)
Ion channels [BR:
kmr04040
]
Ligand-gated channels
GABA-A
108240584 (gabrb2a)
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
OAD_gamma
Motif
Other DBs
NCBI-GeneID:
108240584
NCBI-ProteinID:
XP_017279652
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All DBs
Position
LG9:14986825..15026162
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AA seq
586 aa
AA seq
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MGRIRKKHFGILTFSLLVTFVWTQNVKDIKDPSNMPLVKETVDRLMKGYDIRLRPDFGGA
PVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYSEIAYNLTLDNRVADQLWVP
DTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEI
ESYGYTTDDIEFYWRGGDGAVSGVDRIELPQFSIVDYKLISKNVVFSTGSYPRLSLSFKL
KRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPK
IPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGQGPQRQKKAAEKAATANNEKLRPDPN
KGKTPWKSPRLWLQSLLFKFYSAHFRDHSVKTNSTNKALFPSECGKLRFPLSNSADFVCL
QWLVGNVVQRDDALYARMKQREIDAYDSMWDPIFVDDAALGLGDQRNKMTPDDNILFSTM
EMKNEMGGAGDLSRGLGAPGDPRNTMLAYDSTTLQYRRAAMARQNYGHSALERHAQKKSR
LRRRASQLKVNIPDLSDVNSIDKWSRMIFPTVFSFFNVVYWLYYVH
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggggaggatcaggaaaaagcacttcgggattctgactttctccctcctggtgactttc
gtctggacgcaaaacgtgaaggatatcaaagatccgagcaatatgcctctggtgaaagaa
acggtggacaggctgatgaaaggatacgacattcggttgaggccggattttggaggtgct
cccgtggccgtgggaatgaacatagacatcgccagcatagacatggtctctgaagtcaac
atggactacaccctgaccatgtacttccagcaggcgtggcgggacaagcgcctctcctac
tccgagatcgcctacaacctgacgctggataaccgagtggccgaccagctctgggtcccc
gacacctacttcctcaacgacaagaagtccttcgttcacggcgtcacggtcaagaaccgc
atgatccggctccaccctgatgggacggtgctctacggactccggatcaccacgactgca
gcctgcatgatggacctgcgccgctaccctctagatgagcaaaactgcacgctggagata
gaaagctatgggtacaccactgacgacatagagttttactggaggggtggagacggcgcc
gtgtccggggtggacaggatagagcttccgcagttctccatcgttgactacaagctcatc
tccaagaacgtcgtcttctcaacaggttcctacccccgcctgtccctcagcttcaaactg
aagaggaacatcggttacttcatcctgcagacatacatgccttccatcctgattaccatc
ctctcctgggtctccttctggatcaactatgatgcatcggctgccagagtggccctgggg
atcaccacggtgctgaccatgaccaccatcaacacccacttgcgggagacgctccctaag
atcccctacgtgaaggctatcgacatgtacctgatgggctgcttcgtgttcgtcttcctg
gccctgctggagtacgccttcgtcaactacatcttcttcggccagggcccccagcggcag
aagaaggcggccgagaaagcggccacggccaacaacgagaagctgaggcccgacccaaac
aagggcaagacgccttggaaaagccccaggctgtggctccagagccttctctttaagttt
tattcagcgcactttagagaccacagcgttaagacaaattcaacaaataaagcactcttt
ccttctgagtgtggcaagttacgatttcccctaagtaacagtgctgattttgtatgcttg
cagtggctggtgggaaatgtagttcaaagagatgatgctctgtatgccagaatgaaacag
agggaaattgacgcgtatgactcgatgtgggatcccatctttgtggacgatgccgcatta
ggactaggcgatcaaagaaataagatgacccccgacgacaacatcctcttcagcaccatg
gagatgaagaacgagatgggcggcgccggggatctgtcccggggcctgggagcgccgggg
gatccccgcaacaccatgctggcctacgacagcacgacgctgcagtaccgcagggccgcc
atggcccggcagaactacggccacagcgccttggagcgccacgcccagaagaagtcgcgc
ctacgaagacgggcctcccagctcaaggtgaacatcccagacctgtccgacgtgaactct
atcgacaagtggtccaggatgatcttccccactgtcttctccttcttcaacgtggtctac
tggctctactacgtccattaa
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