Kryptolebias marmoratus (mangrove rivulus): 108240704
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Entry
108240704 CDS
T05608
Symbol
smarcal1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
kmr03036
]
108240704 (smarcal1)
Chromosome and associated proteins [BR:
kmr03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
108240704 (smarcal1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARP
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Flavi_DEAD
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
108240704
NCBI-ProteinID:
XP_017279869
UniProt:
A0A3Q3AX69
LinkDB
All DBs
Position
LG6:9824012..9833043
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AA seq
868 aa
AA seq
DB search
MPNQLTAEQQRKIEENRRRALERRAQRLGGTIGSGKQPSAGSGGAAVRAQPPRQGVSLVP
ADHTNSSSAPKPFGPPTFKKDPQSFSKQVQQPQLQPGTGGQINQNKSTQVTGPHLHSNQH
LNNPALCGGAQPKSNATSSSSGSVVGSFYRQASKPAQAPAPQQPSPSASLTAVPAKKPAV
AIRGKCVPHSDNRFRVEVGYHVELISIFKSISSRNYDPTTKTWNFSLDDYGQLMKQAAAV
PSVSLRPLEGVEALDDVSSNRPRDGAALSALLKLCSSWQKPKATLRGQCILVSRTKFEVD
ILYHADVIAAFKQMPTKSYDVATRKWSFLLEDYKKLMDLLSSIAAVEVEPLPRAIIQAFS
ARFDGTEARSLAVPEADLSSIDPSLTSSLMPFQREGVNFAVSKQGRLLLADDMGLGKTVQ
AICIAAYYKDEWPLLVVTPSSVRFTWAEAFRRWLPSLSPGSINVAVKAKDDMRSGLVNII
SYDLLSRTEKQHQQNSFGVLIMDECHFLKNMKTARCKAALPLLKAAKRVILLSGTPAMSR
PCELYTQILAVRPSLFPRFHEFGLRYCDAREKNWGWDYSGSSNLGELKLLLDECLMLRRL
KSDVLSQLPAKQRKVVTVTIDGINTRTKAALSAAAKELAKNHRSKMEEKAALLVFYNHTA
EAKLQAIMEYITDMLECGREKFLVFAHHKLVLDHITAELVKKGVSFIRIDGTTPSAERQQ
LCEKFQFSSGTCVALLSITAANMGVTLHSADLVIFAELFWNPGVLVQAEDRVHRIGQTSN
VNIHYLVAKGTSDDHLWPMIQSKMNVLEKVGLSESNLSDNAVNASFRSKDPEQKSIMEMF
QRSFSEDDDLDEAVLMEAANDWEEDAAA
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaccagctgaccgcggagcagcagcggaagatagaggagaaccgacggagagct
ttggagcgcagagcccagaggcttggaggaaccatcggctccggtaagcagccttcagcg
ggctccggtggtgctgcagtccgagcacagcctcccagacagggcgtttcactggttcct
gctgatcacacgaattccagctctgcacccaaaccttttggacctccaacctttaaaaaa
gaccctcagagcttcagtaagcaagtccagcaaccccagctgcagcctgggacaggcggt
caaatcaaccaaaacaagtccacacaggtcactggccctcatcttcattccaatcaacac
ctgaacaatcccgccttgtgtggtggagcccagcctaaatctaatgccacctccagcagc
tctggaagcgtggttggctcgttttacaggcaagccagcaaaccggcacaagctcctgcg
ccgcagcaaccttcgccctccgcctccctgactgctgtacctgcgaaaaagcccgccgtc
gccatcagggggaagtgtgtgcctcattcagacaaccgtttccgagtggaagtaggctac
cacgtggagctcatttctattttcaagtccatctcctcgaggaactatgacccaacaaca
aaaacgtggaacttcagtctggatgactacggacagctaatgaagcaggccgctgccgtt
ccctccgtgtctttgaggcctctggagggagtggaagcgttggacgatgtgtcctccaac
cgacctcgtgacggcgccgccctgtcggcgctgctgaagctctgtagcagctggcagaag
cctaaggccactttgcgggggcagtgcatcctggtgtcccgaacaaagtttgaggttgac
atcctttaccacgctgatgtcattgcggcttttaagcaaatgccaacaaaaagctatgat
gtggccacaaggaagtggagctttttgcttgaggattacaagaaactgatggatctgctc
agcagcatagcagcagtggaggtggagcctcttcccagggcgataatccaggctttctct
gccaggtttgatgggactgaagccaggtctttagctgtccctgaggcagacctttctagc
atcgacccctcactcacctccagcctgatgcccttccagagggagggagtcaactttgca
gtgtctaaacaaggccgcctcctcctggctgatgacatgggtttgggcaagacggtgcag
gccatctgtatagcagcttattacaaggacgagtggcctttgttagtggtgactccgtcc
tctgtccggttcacgtgggccgaggcctttagacgttggcttccctctctgagtcccggc
agcatcaacgtggcggtgaaggccaaagatgatatgcgatctggtttggtcaacatcatc
agctatgacctgctgagcaggacggaaaagcagcaccaacaaaactccttcggtgtcctc
attatggatgagtgtcactttctgaagaacatgaagaccgctcgctgtaaagcagcctta
cctctgctaaaggcagcaaagagggtgattcttctgtctgggacccctgcgatgtccaga
ccctgtgagctctacacccagattctggctgtcagaccttcactcttccctcgcttccac
gagtttgggctgcgctactgtgacgccagagagaaaaactggggctgggactactcgggc
tcgtctaaccttggagagctgaagctgttgctggacgagtgcctgatgttgcgccgcctt
aaatccgatgtcctctctcagcttcctgctaaacaacgcaaggtggtcacagtcaccata
gacgggatcaatactcgcacaaaagctgctctctcagccgcagccaaggagctggccaag
aatcatcgcagcaaaatggaggagaaggcagccctcctcgtcttttataaccacacagct
gaagccaagctccaagccattatggagtatataacagacatgctggagtgtgggagggag
aagttcctcgtgtttgcccatcataaattagtcctggatcatatcaccgccgaactggtt
aaaaagggcgtcagcttcatccgcatcgacgggacgaccccgtcggccgagcgacagcag
ttgtgtgaaaagtttcagttctcgtccggcacttgcgtggctttgctgtccataacggcg
gcgaacatgggtgtcactctgcactctgcagacctggtgatcttcgctgagcttttctgg
aacccaggggttctcgttcaggcggaggacagggttcatcgaatcggccaaactagcaac
gtgaatattcactacctggttgccaagggaacttctgatgatcacctttggccaatgatc
cagtcaaagatgaatgtcctggagaaagtgggtttatctgagtcaaacctctcagacaac
gctgtgaacgccagcttccggtccaaggaccccgagcagaagagcatcatggagatgttc
cagagatctttctctgaagatgacgacttggacgaggccgtcctgatggaggctgccaac
gactgggaggaggatgccgctgcttga
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