Kryptolebias marmoratus (mangrove rivulus): 108240832
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Entry
108240832 CDS
T05608
Symbol
snrpd1
Name
(RefSeq) small nuclear ribonucleoprotein Sm D1
KO
K11087
small nuclear ribonucleoprotein D1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108240832 (snrpd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
kmr03041
]
108240832 (snrpd1)
03032 DNA replication proteins [BR:
kmr03032
]
108240832 (snrpd1)
Spliceosome [BR:
kmr03041
]
Complex A
U1 snRNP components
Sm proteins
108240832 (snrpd1)
U2 snRNP components
108240832 (snrpd1)
Complex B
U1 snRNP components
108240832 (snrpd1)
U4/U6.U5 tri-snRNP components
108240832 (snrpd1)
Complex C
U2 snRNP components
108240832 (snrpd1)
DNA replication proteins [BR:
kmr03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
108240832 (snrpd1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
EBNA2_Core
Gemin7
YomU_Tube
Hfq
SM-ATX
API5
AAA_RNF213_3
Motif
Other DBs
NCBI-GeneID:
108240832
NCBI-ProteinID:
XP_017280115
UniProt:
A0A3Q2ZXA3
LinkDB
All DBs
Position
LG5:10537548..10539626
Genome browser
AA seq
119 aa
AA seq
DB search
MKLVRFLMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPTQLESLSI
RGNNIRYFILPDSLPLDTLLVDIEPKIKSKKREAVAGRGRGRGRGRGRGRGRGRGGPRR
NT seq
360 nt
NT seq
+upstream
nt +downstream
nt
atgaaactagtcaggtttttgatgaagctcagccatgagactgtcaccatcgaactgaag
aatggcacccaggttcatggcaccatcacaggtgtcgacgtgagcatgaacacccacctg
aaggcagtgaaaatgaccctgaagaacagggagcccactcagctggagtctctgagtatc
cgtggcaacaacatccgctacttcatcctgccagacagcctccctctggacacactgctg
gtcgacatcgagccgaagatcaagtccaagaagagagaagcagtggccggacggggacga
ggcagaggaagaggacgcgggagaggacggggacgaggacgaggtggaccacgaagatga
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integrated database retrieval system
