Kryptolebias marmoratus (mangrove rivulus): 108240927
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Entry
108240927 CDS
T05608
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108240927 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmr03019
]
108240927 (dhx36)
03012 Translation factors [BR:
kmr03012
]
108240927 (dhx36)
Enzymes [BR:
kmr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
108240927 (dhx36)
Messenger RNA biogenesis [BR:
kmr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
108240927 (dhx36)
Translation factors [BR:
kmr03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
108240927 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
HA2_N
AAA_22
nSTAND3
ATPase
AAA_19
NB-ARC
NPHP3_N
CT47
Motif
Other DBs
NCBI-GeneID:
108240927
NCBI-ProteinID:
XP_017280214
UniProt:
A0A3Q3BAX4
LinkDB
All DBs
Position
LG2:10325637..10353370
Genome browser
AA seq
1071 aa
AA seq
DB search
MSYGYGGGGGRRGRRGGRGHRDGSRERMDRGGGGGVGSRGHSSFDFDQDRGGGGGGQKDR
PPPHLRGREIGLWYARYGAVRRKQADRRSRAVVQMDEAREEHITKLLNSVQNDQSGPRRV
GRESSTSVSDSWQTAATHSGHCYFDGDLPEEEKYKVEVKSDEEEEDITPGQKKASKRNVS
KAAVKDEAPDNWDEEDQDEETKEEKPLRRDKDLEFLFQEVVRDNSKDEYLQRDLHSKKSD
SKYKEMLKFREKLPSYGKKEELVELINSNRVLVVSGETGCGKTTQVTQFILDDHINRGVG
SMCRVVCTQPRRISAISVAERVAAERAESVGNGNSCGYQIRLQSRLPRRQGSILYCTTGI
ILQWLRSDPLLSSISHLVLDEIHERNLQSDVLLIIVKNLLKVRNDLKIILMSATLNAEKF
SKYFDNCPMIHIPGLTFPVEEYLLEDIVEMTRYCPQSQDRRSSWKKSFWQGRNSRPEKEE
KEREYQESWPCYARTLQGRYSDSTIQALEMLDGDEKIDLELILALIRHIVLNEGEGAILV
FLPGWDNISTLNDLLTAQQMFRSDNFVIIPLHSLMPTVNQTQVFKRPPPGVRKIVIATNI
AETSITIDDVVYVIDGGKIKETNFDTNNNISTMTAEWVSLANAKQRKGRAGRVQPGKCYH
LYNGLRASLLDAYQLPEIMRTPLEELCLQIKILKLGSIGQFLEKALDPPSKKAVALAIKN
LTDLNALDHTENLTALGFHLARLPVEPHIGKLILFGALLGCLDPVLTIAASLSFKDPFFI
PLGKEKMADMRRRVLSRNSKSDHLTIVNAVTGWEEAKRRGARSEKDYCWDNFLSANTLQM
LHNMKGQFAEHLMHTGFVSSSDPKDPTSNINSDNEKLIKAVIVAGLYPKVAMIRPSFSKK
RPGVKVYTQADGKVCIHPKSVNAEENDFNYTWLIYHLKMRTSSIFLYDCTEVSPFSLLFF
GGDITIQKDEGQETIAVDQWIVFRSPARIAHLVKSLKKELDSLLEEKISNPAPVDWNNRQ
SKDCAVITAIIDLITTQEKPTGGSKDYGRPWASSSREKHIYFKDEDDDDDD
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgagttatgggtacggaggtggaggtggaagaagaggcagaagaggaggtcgcggacac
agggatggcagcagagagagaatggacagaggtggtggaggaggagttggttcgagagga
cacagtagttttgactttgaccaggaccgaggaggaggaggaggaggtcagaaagaccgt
cctcctccgcatctgaggggccgtgagattggtctttggtacgctcgatacggagccgtg
aggaggaaacaagctgaccggagatcgcgggcagtggtccagatggatgaggccagggag
gagcacattaccaagctgcttaactctgtccagaatgaccagtctggcccaaggagagtc
ggtagggaatcaagtacctctgtgtctgacagctggcagacagctgccactcacagtgga
cactgttactttgacggtgatttgcctgaagaagaaaaatacaaggttgaggtcaagtct
gacgaagaggaagaagacattactccaggccagaagaaagcaagcaaacgtaatgtatct
aaagcagcagttaaagatgaggctccagacaactgggatgaagaagatcaagatgaggaa
acgaaggaagagaaacccctgaggagagacaaggatctggagttcttgtttcaggaagta
gtcagagacaattcaaaggatgagtacttacaaagagatctgcacagcaagaaatctgat
tcaaaatacaaagaaatgctgaaattcagagaaaaactgccatcctatggaaaaaaagag
gagctcgtcgagctgatcaactctaatcgcgtcctcgtggtgagcggggagaccgggtgc
ggaaagaccactcaggtcactcagttcatcctcgacgaccacatcaacagaggcgtgggc
tcgatgtgccgcgtggtctgcacgcaaccccgtcgcatcagcgccatctcggtagcagag
cgtgtagctgcagagagagcagagagtgtggggaatggaaattcttgtgggtaccaaatc
cgcctgcagagccggttaccacggagacaaggctcaatcctgtattgtacaacaggcatt
attcttcagtggctgcgctcagatccgttgttatccagtataagtcacctggtgttggat
gagatccacgagaggaacctccagtcagacgttttgctcatcattgtgaagaatttgctc
aaagtccgaaatgacctgaaaattatcctgatgagtgccacgctcaacgcagagaagttc
tccaaatattttgacaactgtccaatgatccacatccctggtttgacattcccggtggaa
gagtacctgcttgaggacattgttgagatgaccaggtattgtcctcagagtcaggatcgg
cgctcctcatggaagaaaagcttctggcagggtcgcaactcaaggcccgagaaggaggag
aaagagcgggaataccaggagagctggccctgttatgcacgcactcttcagggcagatac
tctgacagcacgatccaggccctggagatgttagacggcgatgagaagattgatctggag
ctgatcctggccctgatccgtcatattgtgctcaacgagggggaaggtgctatcttggtc
ttcctgccaggttgggacaacatcagcactctcaatgacctgctaacggctcagcagatg
ttccgatcagacaattttgttatcatccctctgcactcactcatgcccactgttaatcag
acgcaggtcttcaaaagacctccacctggagtcagaaagattgtgattgctactaacatt
gcagagaccagcatcaccatagacgatgttgtttatgtgatcgatggaggcaagattaag
gagaccaactttgacaccaacaacaacatcagcacgatgacagccgagtgggtcagcttg
gccaatgccaagcagaggaaaggacgcgcaggcagagtgcagccaggaaagtgctaccac
ctgtacaacgggctcagggccagcctgctagatgcctatcaattacctgaaattatgaga
acgccgctggaggagctctgcctgcagataaagattttgaagctgggatccataggtcaa
tttttggagaaagccctggaccctccctctaagaaggccgtggccctcgccatcaaaaac
ctcacagacctgaacgccctggaccacacggagaacctgacggcgctgggtttccacctg
gcccgtctgcctgtggagcctcacatcggcaaactcatcctgttcggagccctgttggga
tgcctcgaccctgtactcaccatcgccgcttcgctcagcttcaaagaccctttcttcatc
cccctgggcaaagaaaagatggcagacatgagaaggagagttctgtccagaaactctaaa
agtgaccacctcactattgtcaacgccgtcacgggctgggaggaagccaaacgacgcggc
gccaggtctgagaaggactactgctgggacaacttcctgtccgccaacacgctccagatg
ctgcacaacatgaagggtcagtttgccgagcacctcatgcacacaggctttgtcagcagc
agtgaccccaaagaccccacatccaatatcaactcagataatgagaagttaatcaaagca
gtgattgtagcaggactctaccccaaagtggccatgatcagaccgtctttcagcaaaaag
agacctggggtgaaggtgtacacccaggctgatggaaaggtgtgtatccacccaaaatct
gtcaacgctgaagagaatgatttcaactacacgtggctcatttatcacctaaagatgaga
acaagcagcatcttcctgtacgactgcacggaagtgtctccgttctcgctgctgttcttc
ggaggggacatcaccatccagaaagacgagggccaggagaccatcgcggtggaccagtgg
atcgtcttcagatccccggcacgcatcgctcaccttgttaagagtttaaagaaagagctg
gactcactgttagaagagaaaatcagcaacccagctcccgtggactggaacaaccgtcag
tccaaagactgtgccgtcatcacagccatcatagacctcatcaccacccaggagaagccc
acaggcggcagtaaagattacggcaggccgtgggcgtcttcctcaagagaaaaacacatt
tacttcaaagacgaagatgatgacgacgatgattag
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integrated database retrieval system
