Kryptolebias marmoratus (mangrove rivulus): 108240965
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Entry
108240965 CDS
T05608
Symbol
prdm4
Name
(RefSeq) PR domain zinc finger protein 4 isoform X1
KO
K12463
PR domain zinc finger protein 4 [EC:2.1.1.-]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kmr03000
]
108240965 (prdm4)
Transcription factors [BR:
kmr03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
108240965 (prdm4)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
Zn_ribbon_PRDM4
zf-H2C2_2
zf-C2H2
zf-C2H2_4
SET
C2CH-3rd_BIRD-IDD
zf-C2H2_16
zf-C2H2_jaz
DUF5810
Motif
Other DBs
NCBI-GeneID:
108240965
NCBI-ProteinID:
XP_017280284
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Position
LG18:complement(15959181..15965182)
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AA seq
882 aa
AA seq
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MALLGEVFCWMNDMNLSPVGMDQLSVPPVSAGHLGLPTSPTHNPIPTPGMPVAIPSLGPS
LGSLPSALSLMLPMGPLSDRGVMCGLPERNYPLPPPPYPHLESSYFRHILPGILSYLADR
PPPQYIHPSSLNLDGTLSVASNNPSSLDPYSGPGGPLEQGLVPMDSRQVSGQGDLHQTGP
HELDSAGLAMESRVSSPLSPDRMGEELASMDGVGVVTVSDAQQQQLGGGRQPQPHEGLAG
VDSSGGVMPLHGPPVLEMPVVIEPDHMAGRVGGSAGGGAAGLGEQLHANGEMSSGVVSVV
LTSSMASQNQLEPVSLHGHSGMGLEAVNVSPITAEVSLGPENNLVLVNSTLQLEDSAPNK
ENMVTAFTIWCTLCERSYTSDCPEHGPVTFVPDAPIQSRARLSLPRPLCLRISVADEPLG
VFARDVIPPRTCFGPVVGQHCSNVDLSDWPEKDTPQTWKMYHNGVLEFYIVTTDENECNW
MMFVRKARTHEEQNLVAYPANGKLFFCTTTEIHPDQELLFYYSRDYSRMMGVPQMPEGQI
CQCGKDCSSFSELKSHLGSHSQPGQNHSPPQPDHAQPQQQPEQQQQTQHVHQEEKLPNVS
SSSSSSSSPPWPCTNHTAAQTNNNNNNSSRSSRSSNNPRAKSQGKVREKKFQCSMCSRAF
ITSSKLNVHFMGHVGMKPHKCEYCSKAFSDPSNLRMHLKIHTGQKNYKCTVCEKSFTQKS
HLASHMLIHTGAEKLKCDLCERAFIRKCDLKQHMLSHTHESRIQCPKCNKRFLKTNHLKK
HLNSHEGRRDFVCEKCHKAFLTKYHLTRHLKICKGPKAERTTRREPNVEEDEEDDDNEEE
EEEDSGGGGGGEDRLMDAANDEDCGLDVGGYNSERSLSPSHR
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atggccctgctcggggaagtgttttgctggatgaacgacatgaacctgagtcctgtgggc
atggaccagctcagcgtgcccccagtgagtgccggccacctgggtctgcccacttccccc
acacacaatcccatccccaccccaggcatgccggtggccatcccgagtttgggtccttcc
cttggttccctgccctctgctctgtctctgatgctccccatgggtccgctgagcgacaga
ggggtgatgtgcggcctgccggagaggaattaccccctgccgcctcccccgtacccccac
ctggagagcagctacttccggcacattctgccaggtattttgtcttacctggcggaccgt
ccacctccgcagtacattcaccccagcagccttaacttggatgggaccctttccgtggcc
agcaacaatccctccagtctggacccttacagtggacctgggggccccctggagcagggc
ctggtgcccatggactcgagacaggtcagcgggcagggggacctccaccagactggccct
catgagctggactctgcagggttagccatggagtcccgcgtcagcagccccctgtccccc
gaccgaatgggggaggagctggcgagcatggacggggttggcgtagtgacggtgtccgac
gcccagcagcagcagctcggaggcgggaggcagcctcagccccacgaaggcctggcgggt
gtggactcctctggcggggtgatgcccctccacggacccccggtgctggagatgcccgtg
gtcatagaaccggatcacatggcggggagggtggggggctcggctggtggcggggcggcg
ggcctcggcgagcagctccacgccaacggggagatgagctcgggcgtcgtgagcgtggtg
ctcaccagctccatggccagccagaaccagctggagccggtgtctctccacggacactcc
gggatggggctggaggccgtgaacgtgtcccccatcaccgcagaggtgtctctggggccg
gaaaacaacctggtgctggtcaactccaccctgcagctggaggactctgctcccaacaag
gagaacatggtcaccgccttcaccatctggtgcacgttatgcgagcgctcgtacacgtcg
gactgtccggagcacggcccggtcaccttcgtccccgatgcgccgatccaaagccgggct
cgcctgtctctgccccgtcctctgtgcctgcgcatctcggtggccgacgaaccgctcggg
gtttttgcccgggacgtcattcctccgaggacctgcttcgggccggtggtgggtcagcac
tgcagcaacgtggatctctccgattggccagagaaggacacgcctcagacgtggaagatg
tatcacaacggcgtactggagttctacattgtgacaacggacgagaacgagtgcaactgg
atgatgttcgtccggaaggcgaggacccacgaggagcagaacctggtggcgtatcctgcc
aacggaaagctcttcttctgcacgacgacagagatccatccggaccaggagctgctcttc
tactacagccgggactacagcaggatgatgggtgttcctcagatgccagaaggtcagatc
tgtcagtgcggcaaagactgctcgtccttctctgagctgaagtctcacctcggcagccac
agccagccgggtcagaaccacagcccgccgcagccggaccatgctcagccgcagcagcag
ccagagcagcagcaacaaacgcagcacgttcaccaggaagagaagctccccaacgtgagc
tccagctcctcctcctcctcctcccccccgtggccttgcaccaaccacacagcagcacaa
acaaacaacaacaacaacaacagcagcaggagcagcaggagctccaacaaccccagagca
aaaagccaggggaaagtccgggagaagaagttccagtgcagcatgtgttcccgggccttc
atcacgtcctccaagctcaacgtgcacttcatgggccacgtcgggatgaaacctcacaag
tgtgagtactgcagcaaggccttcagcgaccccagcaacctgaggatgcacctgaagatc
cacacaggccagaagaactacaagtgcacggtgtgcgagaagtccttcactcagaagtct
cacctggcttcacacatgctgatccacacgggagcagagaagctgaagtgtgacctctgt
gagcgagcgttcatcaggaagtgtgacctgaagcagcacatgctctcccacacacacgag
agccgaatccagtgcccgaagtgcaacaagcgcttcctgaagacaaaccacctgaagaaa
cacctgaactcccacgagggcaggcgggacttcgtctgcgagaagtgccacaaagccttc
ctcaccaagtaccacctgacgcgccacctgaagatctgcaaagggccgaaggccgagagg
acgacccgcagggagccgaacgtcgaggaggacgaggaggatgacgacaacgaagaggag
gaggaagaggacagtggagggggaggaggaggtgaggacagactgatggatgcagctaac
gatgaagactgtggtttagatgttggaggttataactctgagaggtccctgtctccgtct
cacagatga
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